Genetic relationships among Arachis species based on AFLP
Autor(a) principal: | |
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Data de Publicação: | 2002 |
Outros Autores: | , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
DOI: | 10.1590/S1415-47572002000300017 |
Texto Completo: | http://dx.doi.org/10.1590/S1415-47572002000300017 http://hdl.handle.net/11449/17937 |
Resumo: | Amplified Fragment Length Polymorphism (AFLP) was used to establish the genetic relationships among 20 species from seven of the nine sections of genus Arachis. The level of polymorphism among nine accessions of the cultivated peanut, A. hypogaea L., was also evaluated. Three combinations of primers were used to amplify the AFLPs. The fragments were separated in 6% denaturing acrylamide gels. A total of 408 fragments were analyzed. An average of 135.3 fragments per primer combination were scored, and the largest number of fragments was 169 using primer combination Eco RI - ACC / Mse I - CTG, while the lowest was 108, with Eco RI - ACT / Mse I - CTT. In general, the genetic relationships established using AFLPs agreed with the classification established using morphology and crossability data. The results indicated that AFLPs are good markers for establishing the relationships among Arachis species. The polymorphism detected in A. hypogaea by this method was higher than the one found with other markers, like RAPDs and RFLPs. However, our data suggest that the polymorphism detected be using AFLP with only three primer combinations is still too low to be used for any kind of genetic study in this species. |
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Repositório Institucional da UNESP |
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Genetic relationships among Arachis species based on AFLPAFLPArachispeanuttaxonomic relationshipAmplified Fragment Length Polymorphism (AFLP) was used to establish the genetic relationships among 20 species from seven of the nine sections of genus Arachis. The level of polymorphism among nine accessions of the cultivated peanut, A. hypogaea L., was also evaluated. Three combinations of primers were used to amplify the AFLPs. The fragments were separated in 6% denaturing acrylamide gels. A total of 408 fragments were analyzed. An average of 135.3 fragments per primer combination were scored, and the largest number of fragments was 169 using primer combination Eco RI - ACC / Mse I - CTG, while the lowest was 108, with Eco RI - ACT / Mse I - CTT. In general, the genetic relationships established using AFLPs agreed with the classification established using morphology and crossability data. The results indicated that AFLPs are good markers for establishing the relationships among Arachis species. The polymorphism detected in A. hypogaea by this method was higher than the one found with other markers, like RAPDs and RFLPs. However, our data suggest that the polymorphism detected be using AFLP with only three primer combinations is still too low to be used for any kind of genetic study in this species.Universidade Estadual Paulista (UNESP) Departamento de GenéticaEmpresa Brasileira de Pesquisa Agropecuária (EMBRAPA) Recursos Genéticos e Biotecnologia (CENARGEN)Universidade Estadual Paulista (UNESP) Departamento de GenéticaSociedade Brasileira de GenéticaUniversidade Estadual Paulista (Unesp)Empresa Brasileira de Pesquisa Agropecuária (EMBRAPA)Gimenes, Marcos A. [UNESP]Lopes, Catalina R. [UNESP]Valls, Jose F.M.2014-05-20T13:50:14Z2014-05-20T13:50:14Z2002-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article349-353application/pdfhttp://dx.doi.org/10.1590/S1415-47572002000300017Genetics and Molecular Biology. Sociedade Brasileira de Genética, v. 25, n. 3, p. 349-353, 2002.1415-4757http://hdl.handle.net/11449/1793710.1590/S1415-47572002000300017S1415-47572002000300017S1415-47572002000300017.pdfSciELOreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengGenetics and Molecular Biology1.4930,638info:eu-repo/semantics/openAccess2024-01-02T06:22:16Zoai:repositorio.unesp.br:11449/17937Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T21:57:07.336065Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Genetic relationships among Arachis species based on AFLP |
title |
Genetic relationships among Arachis species based on AFLP |
spellingShingle |
Genetic relationships among Arachis species based on AFLP Genetic relationships among Arachis species based on AFLP Gimenes, Marcos A. [UNESP] AFLP Arachis peanut taxonomic relationship Gimenes, Marcos A. [UNESP] AFLP Arachis peanut taxonomic relationship |
title_short |
Genetic relationships among Arachis species based on AFLP |
title_full |
Genetic relationships among Arachis species based on AFLP |
title_fullStr |
Genetic relationships among Arachis species based on AFLP Genetic relationships among Arachis species based on AFLP |
title_full_unstemmed |
Genetic relationships among Arachis species based on AFLP Genetic relationships among Arachis species based on AFLP |
title_sort |
Genetic relationships among Arachis species based on AFLP |
author |
Gimenes, Marcos A. [UNESP] |
author_facet |
Gimenes, Marcos A. [UNESP] Gimenes, Marcos A. [UNESP] Lopes, Catalina R. [UNESP] Valls, Jose F.M. Lopes, Catalina R. [UNESP] Valls, Jose F.M. |
author_role |
author |
author2 |
Lopes, Catalina R. [UNESP] Valls, Jose F.M. |
author2_role |
author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) Empresa Brasileira de Pesquisa Agropecuária (EMBRAPA) |
dc.contributor.author.fl_str_mv |
Gimenes, Marcos A. [UNESP] Lopes, Catalina R. [UNESP] Valls, Jose F.M. |
dc.subject.por.fl_str_mv |
AFLP Arachis peanut taxonomic relationship |
topic |
AFLP Arachis peanut taxonomic relationship |
description |
Amplified Fragment Length Polymorphism (AFLP) was used to establish the genetic relationships among 20 species from seven of the nine sections of genus Arachis. The level of polymorphism among nine accessions of the cultivated peanut, A. hypogaea L., was also evaluated. Three combinations of primers were used to amplify the AFLPs. The fragments were separated in 6% denaturing acrylamide gels. A total of 408 fragments were analyzed. An average of 135.3 fragments per primer combination were scored, and the largest number of fragments was 169 using primer combination Eco RI - ACC / Mse I - CTG, while the lowest was 108, with Eco RI - ACT / Mse I - CTT. In general, the genetic relationships established using AFLPs agreed with the classification established using morphology and crossability data. The results indicated that AFLPs are good markers for establishing the relationships among Arachis species. The polymorphism detected in A. hypogaea by this method was higher than the one found with other markers, like RAPDs and RFLPs. However, our data suggest that the polymorphism detected be using AFLP with only three primer combinations is still too low to be used for any kind of genetic study in this species. |
publishDate |
2002 |
dc.date.none.fl_str_mv |
2002-01-01 2014-05-20T13:50:14Z 2014-05-20T13:50:14Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1590/S1415-47572002000300017 Genetics and Molecular Biology. Sociedade Brasileira de Genética, v. 25, n. 3, p. 349-353, 2002. 1415-4757 http://hdl.handle.net/11449/17937 10.1590/S1415-47572002000300017 S1415-47572002000300017 S1415-47572002000300017.pdf |
url |
http://dx.doi.org/10.1590/S1415-47572002000300017 http://hdl.handle.net/11449/17937 |
identifier_str_mv |
Genetics and Molecular Biology. Sociedade Brasileira de Genética, v. 25, n. 3, p. 349-353, 2002. 1415-4757 10.1590/S1415-47572002000300017 S1415-47572002000300017 S1415-47572002000300017.pdf |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Genetics and Molecular Biology 1.493 0,638 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
349-353 application/pdf |
dc.publisher.none.fl_str_mv |
Sociedade Brasileira de Genética |
publisher.none.fl_str_mv |
Sociedade Brasileira de Genética |
dc.source.none.fl_str_mv |
SciELO reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1822182278971785216 |
dc.identifier.doi.none.fl_str_mv |
10.1590/S1415-47572002000300017 |