Four single nucleotide polymorphisms (SNPs) are associated with resistance and resilience to Haemonchus contortus in Brazilian Morada Nova sheep

Detalhes bibliográficos
Autor(a) principal: Haehling, Marei B. [UNESP]
Data de Publicação: 2020
Outros Autores: Cruvinel, Giovanna G., Toscano, João H.B. [UNESP], Giraldelo, Luciana A., Santos, Isabella B. [UNESP], Esteves, Sergio N., Benavides, Magda V., Barioni Júnior, Waldomiro, Niciura, Simone C.M., Chagas, Ana Carolina. S.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1016/j.vetpar.2020.109053
http://hdl.handle.net/11449/198557
Resumo: Gastrointestinal nematodes are a major constraint in sheep production. Breeding for resistance has proven to be an effective and feasible approach to address this problem. The use and investigation of genetic markers for resistance traits could accelerate genetic progress and lead to a better understanding of underlying molecular mechanisms. Thus, the aim of this study was to evaluate if five single nucleotide polymorphisms SNPs OAR2_14765360, OAR6_81718546, OAR11_62887032, OAR12_69606944 and OAR15_59871543 are associated with resistance and resilience traits in a flock of the Morada Nova sheep breed. Lambs were submitted to two consecutive parasite challenges by oral infection with 4000 infective larvae L3) of Haemonchus contortus. Fecal egg counts (FEC), packed cell volume (PVC) and body weight were measured every one or two weeks for 42 days in each trial. DNA samples from 287 lambs, 131 ewes and 4 rams were amplified by ARMS-PCR or PCR-RFLP and genotypes were determined. Analysis of variance (ANOVA) was used for association analyses between genotypes and phenotypes. In case of significant association, the allele substitution effect was calculated based on a linear model. OAR2_14765360 and OAR12_69606944 were associated with FEC, and OAR12_69606944 also had significant effects on PCV and weight gain, showing favourable associations of the CC genotype with all evaluated traits. Both OAR6_81718546 and OAR11_62887032 were associated with weight gain, and OAR6_81718546 had an additional effect on PCV. OAR15_59871543 was not polymorphic in the population. OAR6_81718546 and OAR12_69606944 presented significant allele substitution effects of -1.06 ± 0.52 kg for the T allele on final body weight and 0.74 ± 0.32 for the C allele in PCV of the same sampling date, respectively. This is the first report of SNPs associated with gastrointestinal nematode resistance in this sheep breed. Our findings support the existence of quantitatice trait loci (QTL) for resistance and resilience in linkage disequilibrium with the polymorphic SNPs and suggest their future use for explorations of these traits in Morada Nova sheep.
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spelling Four single nucleotide polymorphisms (SNPs) are associated with resistance and resilience to Haemonchus contortus in Brazilian Morada Nova sheepGenetic markersHost resistanceMorada Nova sheepParasite challengeGastrointestinal nematodes are a major constraint in sheep production. Breeding for resistance has proven to be an effective and feasible approach to address this problem. The use and investigation of genetic markers for resistance traits could accelerate genetic progress and lead to a better understanding of underlying molecular mechanisms. Thus, the aim of this study was to evaluate if five single nucleotide polymorphisms SNPs OAR2_14765360, OAR6_81718546, OAR11_62887032, OAR12_69606944 and OAR15_59871543 are associated with resistance and resilience traits in a flock of the Morada Nova sheep breed. Lambs were submitted to two consecutive parasite challenges by oral infection with 4000 infective larvae L3) of Haemonchus contortus. Fecal egg counts (FEC), packed cell volume (PVC) and body weight were measured every one or two weeks for 42 days in each trial. DNA samples from 287 lambs, 131 ewes and 4 rams were amplified by ARMS-PCR or PCR-RFLP and genotypes were determined. Analysis of variance (ANOVA) was used for association analyses between genotypes and phenotypes. In case of significant association, the allele substitution effect was calculated based on a linear model. OAR2_14765360 and OAR12_69606944 were associated with FEC, and OAR12_69606944 also had significant effects on PCV and weight gain, showing favourable associations of the CC genotype with all evaluated traits. Both OAR6_81718546 and OAR11_62887032 were associated with weight gain, and OAR6_81718546 had an additional effect on PCV. OAR15_59871543 was not polymorphic in the population. OAR6_81718546 and OAR12_69606944 presented significant allele substitution effects of -1.06 ± 0.52 kg for the T allele on final body weight and 0.74 ± 0.32 for the C allele in PCV of the same sampling date, respectively. This is the first report of SNPs associated with gastrointestinal nematode resistance in this sheep breed. Our findings support the existence of quantitatice trait loci (QTL) for resistance and resilience in linkage disequilibrium with the polymorphic SNPs and suggest their future use for explorations of these traits in Morada Nova sheep.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Faculdade de Ciências Agrárias e Veterinárias Universidade Estadual Paulista Júlio de Mesquita Filho (UNESP), Via de Acesso Prof. Paulo Donato Castellane s/nCentro Universitário Central Paulista (UNICEP) Rua Miguel Petroni, 5111Embrapa Pecuária Sudeste, Rod. Washington Luiz, Km 234 - Fazenda CanchimEmbrapa Pecuária Sul, BR 153 Km 633, Vila IndustrialFaculdade de Ciências Agrárias e Veterinárias Universidade Estadual Paulista Júlio de Mesquita Filho (UNESP), Via de Acesso Prof. Paulo Donato Castellane s/nFAPESP: 2017/00373-2FAPESP: 2017/24289-0Universidade Estadual Paulista (Unesp)Rua Miguel PetroniEmpresa Brasileira de Pesquisa Agropecuária (EMBRAPA)Haehling, Marei B. [UNESP]Cruvinel, Giovanna G.Toscano, João H.B. [UNESP]Giraldelo, Luciana A.Santos, Isabella B. [UNESP]Esteves, Sergio N.Benavides, Magda V.Barioni Júnior, WaldomiroNiciura, Simone C.M.Chagas, Ana Carolina. S.2020-12-12T01:16:05Z2020-12-12T01:16:05Z2020-03-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.1016/j.vetpar.2020.109053Veterinary Parasitology, v. 279.1873-25500304-4017http://hdl.handle.net/11449/19855710.1016/j.vetpar.2020.1090532-s2.0-85079867499Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengVeterinary Parasitologyinfo:eu-repo/semantics/openAccess2021-10-22T16:53:54Zoai:repositorio.unesp.br:11449/198557Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462021-10-22T16:53:54Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Four single nucleotide polymorphisms (SNPs) are associated with resistance and resilience to Haemonchus contortus in Brazilian Morada Nova sheep
title Four single nucleotide polymorphisms (SNPs) are associated with resistance and resilience to Haemonchus contortus in Brazilian Morada Nova sheep
spellingShingle Four single nucleotide polymorphisms (SNPs) are associated with resistance and resilience to Haemonchus contortus in Brazilian Morada Nova sheep
Haehling, Marei B. [UNESP]
Genetic markers
Host resistance
Morada Nova sheep
Parasite challenge
title_short Four single nucleotide polymorphisms (SNPs) are associated with resistance and resilience to Haemonchus contortus in Brazilian Morada Nova sheep
title_full Four single nucleotide polymorphisms (SNPs) are associated with resistance and resilience to Haemonchus contortus in Brazilian Morada Nova sheep
title_fullStr Four single nucleotide polymorphisms (SNPs) are associated with resistance and resilience to Haemonchus contortus in Brazilian Morada Nova sheep
title_full_unstemmed Four single nucleotide polymorphisms (SNPs) are associated with resistance and resilience to Haemonchus contortus in Brazilian Morada Nova sheep
title_sort Four single nucleotide polymorphisms (SNPs) are associated with resistance and resilience to Haemonchus contortus in Brazilian Morada Nova sheep
author Haehling, Marei B. [UNESP]
author_facet Haehling, Marei B. [UNESP]
Cruvinel, Giovanna G.
Toscano, João H.B. [UNESP]
Giraldelo, Luciana A.
Santos, Isabella B. [UNESP]
Esteves, Sergio N.
Benavides, Magda V.
Barioni Júnior, Waldomiro
Niciura, Simone C.M.
Chagas, Ana Carolina. S.
author_role author
author2 Cruvinel, Giovanna G.
Toscano, João H.B. [UNESP]
Giraldelo, Luciana A.
Santos, Isabella B. [UNESP]
Esteves, Sergio N.
Benavides, Magda V.
Barioni Júnior, Waldomiro
Niciura, Simone C.M.
Chagas, Ana Carolina. S.
author2_role author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
Rua Miguel Petroni
Empresa Brasileira de Pesquisa Agropecuária (EMBRAPA)
dc.contributor.author.fl_str_mv Haehling, Marei B. [UNESP]
Cruvinel, Giovanna G.
Toscano, João H.B. [UNESP]
Giraldelo, Luciana A.
Santos, Isabella B. [UNESP]
Esteves, Sergio N.
Benavides, Magda V.
Barioni Júnior, Waldomiro
Niciura, Simone C.M.
Chagas, Ana Carolina. S.
dc.subject.por.fl_str_mv Genetic markers
Host resistance
Morada Nova sheep
Parasite challenge
topic Genetic markers
Host resistance
Morada Nova sheep
Parasite challenge
description Gastrointestinal nematodes are a major constraint in sheep production. Breeding for resistance has proven to be an effective and feasible approach to address this problem. The use and investigation of genetic markers for resistance traits could accelerate genetic progress and lead to a better understanding of underlying molecular mechanisms. Thus, the aim of this study was to evaluate if five single nucleotide polymorphisms SNPs OAR2_14765360, OAR6_81718546, OAR11_62887032, OAR12_69606944 and OAR15_59871543 are associated with resistance and resilience traits in a flock of the Morada Nova sheep breed. Lambs were submitted to two consecutive parasite challenges by oral infection with 4000 infective larvae L3) of Haemonchus contortus. Fecal egg counts (FEC), packed cell volume (PVC) and body weight were measured every one or two weeks for 42 days in each trial. DNA samples from 287 lambs, 131 ewes and 4 rams were amplified by ARMS-PCR or PCR-RFLP and genotypes were determined. Analysis of variance (ANOVA) was used for association analyses between genotypes and phenotypes. In case of significant association, the allele substitution effect was calculated based on a linear model. OAR2_14765360 and OAR12_69606944 were associated with FEC, and OAR12_69606944 also had significant effects on PCV and weight gain, showing favourable associations of the CC genotype with all evaluated traits. Both OAR6_81718546 and OAR11_62887032 were associated with weight gain, and OAR6_81718546 had an additional effect on PCV. OAR15_59871543 was not polymorphic in the population. OAR6_81718546 and OAR12_69606944 presented significant allele substitution effects of -1.06 ± 0.52 kg for the T allele on final body weight and 0.74 ± 0.32 for the C allele in PCV of the same sampling date, respectively. This is the first report of SNPs associated with gastrointestinal nematode resistance in this sheep breed. Our findings support the existence of quantitatice trait loci (QTL) for resistance and resilience in linkage disequilibrium with the polymorphic SNPs and suggest their future use for explorations of these traits in Morada Nova sheep.
publishDate 2020
dc.date.none.fl_str_mv 2020-12-12T01:16:05Z
2020-12-12T01:16:05Z
2020-03-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1016/j.vetpar.2020.109053
Veterinary Parasitology, v. 279.
1873-2550
0304-4017
http://hdl.handle.net/11449/198557
10.1016/j.vetpar.2020.109053
2-s2.0-85079867499
url http://dx.doi.org/10.1016/j.vetpar.2020.109053
http://hdl.handle.net/11449/198557
identifier_str_mv Veterinary Parasitology, v. 279.
1873-2550
0304-4017
10.1016/j.vetpar.2020.109053
2-s2.0-85079867499
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Veterinary Parasitology
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
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