Cytogenetic Mapping of Cattle BAC Probes for the Hypothetical Ancestral Karyotype of the Family Cervidae
Autor(a) principal: | |
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Data de Publicação: | 2022 |
Outros Autores: | , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1159/000525592 http://hdl.handle.net/11449/237673 |
Resumo: | Cervids are characterized by their greatest karyotypic diversity among mammals. A great diversity of chromosome numbers in notably similar morphological groups leads to the existence of several complexes of cryptic species and taxonomic uncertainties. Some deer lineages, such as those of Neotropical deer, stand out for a rapid chromosomal reorganization and intraspecific chromosome polymorphisms, which have not been properly explored yet. For that reason, we contribute to the study of deer karyotype diversity and taxonomy by producing and characterizing new molecular cytogenetic markers for the gray brocket deer (Subulo gouazoubira), a deer species that retained the hypothetical ancestral karyotype of Cervidae. We used bacterial artificial chromosome (BAC) clones derived from the cattle genome (Bos taurus) as markers, which were hybridized on S. gouazoubira metaphase chromosomes. In total, we mapped 108 markers, encompassing all gray brocket deer chromosomes, except the Y chromosome. The detailed analysis of fluorescent in situ hybridization results showed 6 fissions and 1 fusion as interchromosomal rearrangements that have separated cattle and gray brocket deer karyotypes. Each group of BAC probes derived from bovine chromosome pairs 1, 2, 5, 6, 8, and 9 showed hybridization signals on 2 different chromosomes, while pairs 28 and 26 are fused in tandem in a single acrocentric chromosome in S. gouazoubira. Furthermore, the BAC markers detected the occurrence of intrachromosomal rearrangements in the S. gouazoubira chromosomes homologous to pair 1 and the X chromosome of cattle. We present a karyotypic map of the 108 new markers, which will be of great importance for future karyotypic evolution studies in cervids and, consequently, help in their conservation and taxonomy resolution. |
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Cytogenetic Mapping of Cattle BAC Probes for the Hypothetical Ancestral Karyotype of the Family CervidaeChromosomal evolutionFISHGray brocket deerMolecular cytogeneticsCervids are characterized by their greatest karyotypic diversity among mammals. A great diversity of chromosome numbers in notably similar morphological groups leads to the existence of several complexes of cryptic species and taxonomic uncertainties. Some deer lineages, such as those of Neotropical deer, stand out for a rapid chromosomal reorganization and intraspecific chromosome polymorphisms, which have not been properly explored yet. For that reason, we contribute to the study of deer karyotype diversity and taxonomy by producing and characterizing new molecular cytogenetic markers for the gray brocket deer (Subulo gouazoubira), a deer species that retained the hypothetical ancestral karyotype of Cervidae. We used bacterial artificial chromosome (BAC) clones derived from the cattle genome (Bos taurus) as markers, which were hybridized on S. gouazoubira metaphase chromosomes. In total, we mapped 108 markers, encompassing all gray brocket deer chromosomes, except the Y chromosome. The detailed analysis of fluorescent in situ hybridization results showed 6 fissions and 1 fusion as interchromosomal rearrangements that have separated cattle and gray brocket deer karyotypes. Each group of BAC probes derived from bovine chromosome pairs 1, 2, 5, 6, 8, and 9 showed hybridization signals on 2 different chromosomes, while pairs 28 and 26 are fused in tandem in a single acrocentric chromosome in S. gouazoubira. Furthermore, the BAC markers detected the occurrence of intrachromosomal rearrangements in the S. gouazoubira chromosomes homologous to pair 1 and the X chromosome of cattle. We present a karyotypic map of the 108 new markers, which will be of great importance for future karyotypic evolution studies in cervids and, consequently, help in their conservation and taxonomy resolution.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Czech Science Foundation (GACR)Ministry of Agriculture of the Czech RepublicNational Fund for Scientific, Technological Development and Technological Innovation (FONDECYT)National Council for Science, Technology and Technological Innovation (CONCYTEC) PeruConselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Sao Paulo State Univ UNESP, Sch Agr & Vet Sci, Deer Res & Conservat Ctr NUPECCE, Jaboticabal, BrazilCent European Inst Technol, Vet Res Inst, Brno, Czech RepublicSao Paulo State Univ UNESP, Sch Agr & Vet Sci, Deer Res & Conservat Ctr NUPECCE, Jaboticabal, BrazilFAPESP: 2017/07014-8FAPESP: 2018/25769-9FAPESP: 2019/20810-3FAPESP: 2019/06940-1Czech Science Foundation (GACR): 20-22517JMinistry of Agriculture of the Czech Republic: RO 0520National Council for Science, Technology and Technological Innovation (CONCYTEC) Peru: 116-2017-FONDECYTKargerUniversidade Estadual Paulista (UNESP)Cent European Inst TechnolBernegossi, Agda Maria [UNESP]Vozdova, MiluseCernohorska, HalinaKubickova, SvatavaGalindo, David Javier [UNESP]Kadlcikova, DitaRubes, JiriDuarte, Jose Mauricio Barbanti [UNESP]2022-11-30T13:41:29Z2022-11-30T13:41:29Z2022-08-18info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article8http://dx.doi.org/10.1159/000525592Cytogenetic And Genome Research. Basel: Karger, 8 p., 2022.1424-8581http://hdl.handle.net/11449/23767310.1159/000525592WOS:000844375700001Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengCytogenetic And Genome Researchinfo:eu-repo/semantics/openAccess2022-11-30T13:41:29Zoai:repositorio.unesp.br:11449/237673Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T22:24:31.743002Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Cytogenetic Mapping of Cattle BAC Probes for the Hypothetical Ancestral Karyotype of the Family Cervidae |
title |
Cytogenetic Mapping of Cattle BAC Probes for the Hypothetical Ancestral Karyotype of the Family Cervidae |
spellingShingle |
Cytogenetic Mapping of Cattle BAC Probes for the Hypothetical Ancestral Karyotype of the Family Cervidae Bernegossi, Agda Maria [UNESP] Chromosomal evolution FISH Gray brocket deer Molecular cytogenetics |
title_short |
Cytogenetic Mapping of Cattle BAC Probes for the Hypothetical Ancestral Karyotype of the Family Cervidae |
title_full |
Cytogenetic Mapping of Cattle BAC Probes for the Hypothetical Ancestral Karyotype of the Family Cervidae |
title_fullStr |
Cytogenetic Mapping of Cattle BAC Probes for the Hypothetical Ancestral Karyotype of the Family Cervidae |
title_full_unstemmed |
Cytogenetic Mapping of Cattle BAC Probes for the Hypothetical Ancestral Karyotype of the Family Cervidae |
title_sort |
Cytogenetic Mapping of Cattle BAC Probes for the Hypothetical Ancestral Karyotype of the Family Cervidae |
author |
Bernegossi, Agda Maria [UNESP] |
author_facet |
Bernegossi, Agda Maria [UNESP] Vozdova, Miluse Cernohorska, Halina Kubickova, Svatava Galindo, David Javier [UNESP] Kadlcikova, Dita Rubes, Jiri Duarte, Jose Mauricio Barbanti [UNESP] |
author_role |
author |
author2 |
Vozdova, Miluse Cernohorska, Halina Kubickova, Svatava Galindo, David Javier [UNESP] Kadlcikova, Dita Rubes, Jiri Duarte, Jose Mauricio Barbanti [UNESP] |
author2_role |
author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (UNESP) Cent European Inst Technol |
dc.contributor.author.fl_str_mv |
Bernegossi, Agda Maria [UNESP] Vozdova, Miluse Cernohorska, Halina Kubickova, Svatava Galindo, David Javier [UNESP] Kadlcikova, Dita Rubes, Jiri Duarte, Jose Mauricio Barbanti [UNESP] |
dc.subject.por.fl_str_mv |
Chromosomal evolution FISH Gray brocket deer Molecular cytogenetics |
topic |
Chromosomal evolution FISH Gray brocket deer Molecular cytogenetics |
description |
Cervids are characterized by their greatest karyotypic diversity among mammals. A great diversity of chromosome numbers in notably similar morphological groups leads to the existence of several complexes of cryptic species and taxonomic uncertainties. Some deer lineages, such as those of Neotropical deer, stand out for a rapid chromosomal reorganization and intraspecific chromosome polymorphisms, which have not been properly explored yet. For that reason, we contribute to the study of deer karyotype diversity and taxonomy by producing and characterizing new molecular cytogenetic markers for the gray brocket deer (Subulo gouazoubira), a deer species that retained the hypothetical ancestral karyotype of Cervidae. We used bacterial artificial chromosome (BAC) clones derived from the cattle genome (Bos taurus) as markers, which were hybridized on S. gouazoubira metaphase chromosomes. In total, we mapped 108 markers, encompassing all gray brocket deer chromosomes, except the Y chromosome. The detailed analysis of fluorescent in situ hybridization results showed 6 fissions and 1 fusion as interchromosomal rearrangements that have separated cattle and gray brocket deer karyotypes. Each group of BAC probes derived from bovine chromosome pairs 1, 2, 5, 6, 8, and 9 showed hybridization signals on 2 different chromosomes, while pairs 28 and 26 are fused in tandem in a single acrocentric chromosome in S. gouazoubira. Furthermore, the BAC markers detected the occurrence of intrachromosomal rearrangements in the S. gouazoubira chromosomes homologous to pair 1 and the X chromosome of cattle. We present a karyotypic map of the 108 new markers, which will be of great importance for future karyotypic evolution studies in cervids and, consequently, help in their conservation and taxonomy resolution. |
publishDate |
2022 |
dc.date.none.fl_str_mv |
2022-11-30T13:41:29Z 2022-11-30T13:41:29Z 2022-08-18 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1159/000525592 Cytogenetic And Genome Research. Basel: Karger, 8 p., 2022. 1424-8581 http://hdl.handle.net/11449/237673 10.1159/000525592 WOS:000844375700001 |
url |
http://dx.doi.org/10.1159/000525592 http://hdl.handle.net/11449/237673 |
identifier_str_mv |
Cytogenetic And Genome Research. Basel: Karger, 8 p., 2022. 1424-8581 10.1159/000525592 WOS:000844375700001 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Cytogenetic And Genome Research |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
8 |
dc.publisher.none.fl_str_mv |
Karger |
publisher.none.fl_str_mv |
Karger |
dc.source.none.fl_str_mv |
Web of Science reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
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1808129424170680320 |