Identificação de genes diferencialmente expressos em amendoim, submetido a estresse hídrico

Detalhes bibliográficos
Autor(a) principal: DUARTE, Elizabeth Amélia Alves
Data de Publicação: 2008
Tipo de documento: Dissertação
Idioma: por
Título da fonte: Biblioteca Digital de Teses e Dissertações da UFRPE
Texto Completo: http://www.tede2.ufrpe.br:8080/tede2/handle/tede2/6226
Resumo: Peanut is a worldwide important product for food industries. In Brazil this crop is quite representative due its high consume. Most part of production is concentrated in the Southeast, Center-West and Northeast regions. In this last one, the wheather is a limiting factor for the crop; however, some botanical types present tolerance to prolonged dry conditions. The aim of this work was to identify genes differentially expressed in a peanut cultivar submitted to water stress which could aid on selective processes in the improvement programs carried out with this crop in the Northeast region. The cv. Senegal 55437 was chosen for this study due its recognizable tolerance to drought. It was submitted to five days of water stress under greenhouse conditions. The total RNA was collected from foliar tissues when plants reached 50% stomatic closure. RT-PCR assays were performed using ten ISSR primers and the c- DNAs obtained were re-amplified, purified and cloned into Escherichia coli, INFα cell (Invitrogen). A total of twenty-nine cDNA fragments were obtained, being seventeen at the down regulated condition, two at over regulated and ten activated. These later, only found in stressed samples, were sequenced. Sequences obtained were compared into databanks, focusing on Arabidobis thaliana and Arachis banks, andfour showed homology with genes which are involved in metabolic routes to abiotic and biotic factors. One of these sequences, with about 700pb, showed homology with Arabinogalactan protein 10 of A. thaliana. This structural protein present in the leaves, stems and roots is associated to regulatory processes initiated during the water loss by the cell, which genes increase protection to the cytoplasm, organelles,cell membranes, cellular osmotic potential alteration and improve better regulation in the expression of other genes. The result here obtained suggests a possible relation of this gene with the response routes to water stress.
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spelling MELO FILHO, Péricles de AlbuquerqueNOGUEIRA, Rejane Jurema Mansur CustódioSANTOS, Roseane Cavalcanti dosNASCIMENTO, Ana Verônica Silva doLIMA, Liziane Maria deANUNCIAÇÃO FILHO, Clodoaldo José dahttp://lattes.cnpq.br/5329272431097776DUARTE, Elizabeth Amélia Alves2017-02-07T17:26:10Z2008-02-27DUARTE, Elizabeth Amélia Alves. Identificação de genes diferencialmente expressos em amendoim, submetido a estresse hídrico. 2008. 56 f. Dissertação (Programa de Pós-Graduação em Melhoramento Genético de Plantas) - Universidade Federal Rural de Pernambuco, Recife.http://www.tede2.ufrpe.br:8080/tede2/handle/tede2/6226Peanut is a worldwide important product for food industries. In Brazil this crop is quite representative due its high consume. Most part of production is concentrated in the Southeast, Center-West and Northeast regions. In this last one, the wheather is a limiting factor for the crop; however, some botanical types present tolerance to prolonged dry conditions. The aim of this work was to identify genes differentially expressed in a peanut cultivar submitted to water stress which could aid on selective processes in the improvement programs carried out with this crop in the Northeast region. The cv. Senegal 55437 was chosen for this study due its recognizable tolerance to drought. It was submitted to five days of water stress under greenhouse conditions. The total RNA was collected from foliar tissues when plants reached 50% stomatic closure. RT-PCR assays were performed using ten ISSR primers and the c- DNAs obtained were re-amplified, purified and cloned into Escherichia coli, INFα cell (Invitrogen). A total of twenty-nine cDNA fragments were obtained, being seventeen at the down regulated condition, two at over regulated and ten activated. These later, only found in stressed samples, were sequenced. Sequences obtained were compared into databanks, focusing on Arabidobis thaliana and Arachis banks, andfour showed homology with genes which are involved in metabolic routes to abiotic and biotic factors. One of these sequences, with about 700pb, showed homology with Arabinogalactan protein 10 of A. thaliana. This structural protein present in the leaves, stems and roots is associated to regulatory processes initiated during the water loss by the cell, which genes increase protection to the cytoplasm, organelles,cell membranes, cellular osmotic potential alteration and improve better regulation in the expression of other genes. The result here obtained suggests a possible relation of this gene with the response routes to water stress.O amendoim é um produto de grande importância mundial para a indústria de alimentos, sendo bastante representativo no Brasil que é um dos maiores produtores e consumidores dessa oleaginosa. Grande parte da produção está concentrada nas regiões Sudeste, Centro-Oeste e Nordeste. Nesta última região, o clima é um fator limitante ao seu cultivo, embora alguns tipos botânicos apresentem tolerância às condições de estiagem prolongada. O presente trabalho teve como objetivo identificar genes diferencialmente expressos em amendoim, submetido a estresse hídrico, que possam auxiliar nos programas de melhoramento genético da cultura na região Nordeste. Para este estudo a cultivar Senegal 55437, de reconhecida tolerância à seca, foi submetida a cinco dias de estresse hídrico em condições de casa de vegetação. O RNA total foi coletado a partir de tecidos foliares, quando as plantas atingiram 50% de fechamento estomático. Para a identificação de genes diferencialmente expressos, procedeu-se ensaios de RT-PCR utilizando-se primers ISSR. Os c-DNAs obtidos foram reamplificados, purificados, ligados em vetor pGEMT-Easy e clonados em Escherichia coli, célula INFα (Invitrogen). Foram obtidos vinte e nove fragmentos de cDNA dos quais dezessete na condição de subregulados,dois super-regulados e dez ativados, estes últimos encontrados apenas nas amostras estressadas, os quais foram seqüenciados. As seqüências obtidas foram comparadas em bancos de dados, evidenciando os bancos de Arabidobis thaliana e Arachis. Dentre as seqüências, quatro apresentaram homologia com genes conhecidos e envolvidos em rotas metabólicas de resposta a fatores abióticos e bióticos. Uma dessas seqüências com cerca de 700 pb apresentou homologia com a proteína Arabinogalactana 10 de A. thaliana. Essa proteína estrutural presente nas folhas, caules e raízes dos vegetais esta associada a processos regulatórios iniciados durante a perda de água pela célula, cujos genes envolvidos promovem aumento da proteção do citoplasma, organelas, membranas celulares, alterações do potencial celular osmótico e maior regulação da expressão de outros genes. O resultado aqui obtido sugere uma possível relação desse gene no envolvimento das rotas de resposta ao estresse hídrico.Submitted by (ana.araujo@ufrpe.br) on 2017-02-07T17:26:10Z No. of bitstreams: 1 Elizabeth Amelia Alves Duarte.pdf: 531566 bytes, checksum: 30a6ba5dcefc32c0b3e28c56510a6913 (MD5)Made available in DSpace on 2017-02-07T17:26:10Z (GMT). No. of bitstreams: 1 Elizabeth Amelia Alves Duarte.pdf: 531566 bytes, checksum: 30a6ba5dcefc32c0b3e28c56510a6913 (MD5) Previous issue date: 2008-02-27Conselho Nacional de Pesquisa e Desenvolvimento Científico e Tecnológico - CNPqapplication/pdfporUniversidade Federal Rural de PernambucoPrograma de Pós-Graduação em Melhoramento Genético de PlantasUFRPEBrasilDepartamento de AgronomiaAmendoimArachisExpressão diferencialEstresse hídricoFITOTECNIA::MELHORAMENTO VEGETALIdentificação de genes diferencialmente expressos em amendoim, submetido a estresse hídricoinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesis-6234655866848882505600600600600-68005538799722292052615607299470131967-2555911436985713659info:eu-repo/semantics/openAccessreponame:Biblioteca Digital de Teses e Dissertações da UFRPEinstname:Universidade Federal Rural de Pernambuco (UFRPE)instacron:UFRPELICENSElicense.txtlicense.txttext/plain; charset=utf-82165http://www.tede2.ufrpe.br:8080/tede2/bitstream/tede2/6226/1/license.txtbd3efa91386c1718a7f26a329fdcb468MD51ORIGINALElizabeth Amelia Alves Duarte.pdfElizabeth Amelia Alves Duarte.pdfapplication/pdf531566http://www.tede2.ufrpe.br:8080/tede2/bitstream/tede2/6226/2/Elizabeth+Amelia+Alves+Duarte.pdf30a6ba5dcefc32c0b3e28c56510a6913MD52tede2/62262018-04-10 11:28:20.274oai:tede2: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Biblioteca Digital de Teses e Dissertaçõeshttp://www.tede2.ufrpe.br:8080/tede/PUBhttp://www.tede2.ufrpe.br:8080/oai/requestbdtd@ufrpe.br ||bdtd@ufrpe.bropendoar:2024-05-28T12:34:04.545830Biblioteca Digital de Teses e Dissertações da UFRPE - Universidade Federal Rural de Pernambuco (UFRPE)false
dc.title.por.fl_str_mv Identificação de genes diferencialmente expressos em amendoim, submetido a estresse hídrico
title Identificação de genes diferencialmente expressos em amendoim, submetido a estresse hídrico
spellingShingle Identificação de genes diferencialmente expressos em amendoim, submetido a estresse hídrico
DUARTE, Elizabeth Amélia Alves
Amendoim
Arachis
Expressão diferencial
Estresse hídrico
FITOTECNIA::MELHORAMENTO VEGETAL
title_short Identificação de genes diferencialmente expressos em amendoim, submetido a estresse hídrico
title_full Identificação de genes diferencialmente expressos em amendoim, submetido a estresse hídrico
title_fullStr Identificação de genes diferencialmente expressos em amendoim, submetido a estresse hídrico
title_full_unstemmed Identificação de genes diferencialmente expressos em amendoim, submetido a estresse hídrico
title_sort Identificação de genes diferencialmente expressos em amendoim, submetido a estresse hídrico
author DUARTE, Elizabeth Amélia Alves
author_facet DUARTE, Elizabeth Amélia Alves
author_role author
dc.contributor.advisor1.fl_str_mv MELO FILHO, Péricles de Albuquerque
dc.contributor.advisor-co1.fl_str_mv NOGUEIRA, Rejane Jurema Mansur Custódio
dc.contributor.advisor-co2.fl_str_mv SANTOS, Roseane Cavalcanti dos
dc.contributor.referee1.fl_str_mv NASCIMENTO, Ana Verônica Silva do
dc.contributor.referee2.fl_str_mv LIMA, Liziane Maria de
dc.contributor.referee3.fl_str_mv ANUNCIAÇÃO FILHO, Clodoaldo José da
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/5329272431097776
dc.contributor.author.fl_str_mv DUARTE, Elizabeth Amélia Alves
contributor_str_mv MELO FILHO, Péricles de Albuquerque
NOGUEIRA, Rejane Jurema Mansur Custódio
SANTOS, Roseane Cavalcanti dos
NASCIMENTO, Ana Verônica Silva do
LIMA, Liziane Maria de
ANUNCIAÇÃO FILHO, Clodoaldo José da
dc.subject.por.fl_str_mv Amendoim
Arachis
Expressão diferencial
Estresse hídrico
topic Amendoim
Arachis
Expressão diferencial
Estresse hídrico
FITOTECNIA::MELHORAMENTO VEGETAL
dc.subject.cnpq.fl_str_mv FITOTECNIA::MELHORAMENTO VEGETAL
description Peanut is a worldwide important product for food industries. In Brazil this crop is quite representative due its high consume. Most part of production is concentrated in the Southeast, Center-West and Northeast regions. In this last one, the wheather is a limiting factor for the crop; however, some botanical types present tolerance to prolonged dry conditions. The aim of this work was to identify genes differentially expressed in a peanut cultivar submitted to water stress which could aid on selective processes in the improvement programs carried out with this crop in the Northeast region. The cv. Senegal 55437 was chosen for this study due its recognizable tolerance to drought. It was submitted to five days of water stress under greenhouse conditions. The total RNA was collected from foliar tissues when plants reached 50% stomatic closure. RT-PCR assays were performed using ten ISSR primers and the c- DNAs obtained were re-amplified, purified and cloned into Escherichia coli, INFα cell (Invitrogen). A total of twenty-nine cDNA fragments were obtained, being seventeen at the down regulated condition, two at over regulated and ten activated. These later, only found in stressed samples, were sequenced. Sequences obtained were compared into databanks, focusing on Arabidobis thaliana and Arachis banks, andfour showed homology with genes which are involved in metabolic routes to abiotic and biotic factors. One of these sequences, with about 700pb, showed homology with Arabinogalactan protein 10 of A. thaliana. This structural protein present in the leaves, stems and roots is associated to regulatory processes initiated during the water loss by the cell, which genes increase protection to the cytoplasm, organelles,cell membranes, cellular osmotic potential alteration and improve better regulation in the expression of other genes. The result here obtained suggests a possible relation of this gene with the response routes to water stress.
publishDate 2008
dc.date.issued.fl_str_mv 2008-02-27
dc.date.accessioned.fl_str_mv 2017-02-07T17:26:10Z
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dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
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dc.identifier.citation.fl_str_mv DUARTE, Elizabeth Amélia Alves. Identificação de genes diferencialmente expressos em amendoim, submetido a estresse hídrico. 2008. 56 f. Dissertação (Programa de Pós-Graduação em Melhoramento Genético de Plantas) - Universidade Federal Rural de Pernambuco, Recife.
dc.identifier.uri.fl_str_mv http://www.tede2.ufrpe.br:8080/tede2/handle/tede2/6226
identifier_str_mv DUARTE, Elizabeth Amélia Alves. Identificação de genes diferencialmente expressos em amendoim, submetido a estresse hídrico. 2008. 56 f. Dissertação (Programa de Pós-Graduação em Melhoramento Genético de Plantas) - Universidade Federal Rural de Pernambuco, Recife.
url http://www.tede2.ufrpe.br:8080/tede2/handle/tede2/6226
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dc.publisher.none.fl_str_mv Universidade Federal Rural de Pernambuco
dc.publisher.program.fl_str_mv Programa de Pós-Graduação em Melhoramento Genético de Plantas
dc.publisher.initials.fl_str_mv UFRPE
dc.publisher.country.fl_str_mv Brasil
dc.publisher.department.fl_str_mv Departamento de Agronomia
publisher.none.fl_str_mv Universidade Federal Rural de Pernambuco
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