Análise da diversidade genética voltada à conservação do cavalo marinho Hippocampus patagonicus no litoral do Brasil

Detalhes bibliográficos
Autor(a) principal: NASCIMENTO, Jaiane da Silva
Data de Publicação: 2019
Tipo de documento: Dissertação
Idioma: por
Título da fonte: Biblioteca Digital de Teses e Dissertações da UFRPE
Texto Completo: http://www.tede2.ufrpe.br:8080/tede2/handle/tede2/8256
Resumo: Seahorses are highly endangered fish worldwide. Among the causes pointed in decline of populations is indiscriminate fishing on non-target organisms, the bycatch. More 95% of seahorses present in international trade come from this type of fishing. Considering the high impact this anthropic action on H. patatagonicus, the knowledge of genetic diversity and the population structure in regions of intense fishing activity can help to take conservation measures. Here we evaluate this information for part of the species distribution, especially with analysis of animals captured by bycatch along the coast of Rio de Janeiro, where fishing activity is intense. The genetic information has been accessed by mitochondrial data from partial sequencing of 652 bp cytochrome oxidase gene subunit I (COI) and the nuclear genome, from four primers Inter Simple Sequence Repeat (ISSR). The 30 COI sequences obtained here for the samples RJ were analyzed together with GenBank database for individuals of Rio Grande do Sul (RS) and Argentina (AR) showing increased genetic distance for the samples of RJ in relation to the other two populations. In interpopulational analysis, the RJ samples were also the ones with the highest diversity. The analysis of similarity by Neighbor-joining and the model of the number of Kimura 2 parameters and the Baps separated into groups monophyletic the populations of RJ of those of RS and RA. Molecular analysis of variance (AMOVA) also showed high population structure (Fst = 48.68), also separating the samples. The ISSR data revealed 74 loci, all polymorphic for the 60 individuals analyzed. The intrapopulation genetic distance was smaller for the individuals of the Macaé and Joatinga groups up to Ilha Grande, and higher for the samples from Ilha Rasa to Santana Island. The similarity analysis by Neighbor-joining, the model number of differences together with Evanno test and Bayesian analysis made through Structure, defined distinct genetic patterns, almost separating them into monophyletic groups. AMOVA revealed a high population structure for the species studied (Fst = 34.33). Genetic differentiation H. patagonicus along the coast of Rio de Janeiro reflects the importance of genetic studies not only in macro scale, as well as in micro-regional, reflecting the importance of this type of analysis as a way to support correct management actions aimed at conservation species that are in danger of extinction. This population structure and the high genetic diversity of RJ samples support the importance of conservation of the seahorses of this locality from an evolutionary point of view, revealing the uniqueness there genetic patrimony observed.
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spelling MONTES, Martín AlejandroGARCIA, Ana Cristina LauerSILVEIRA, Rosana BeatrizMONTES, Martín AlejandroAMORIM, Igor Costa deGOMES, Paula Bragahttp://lattes.cnpq.br/3425063166878315NASCIMENTO, Jaiane da Silva2019-10-09T13:38:26Z2019-06-27NASCIMENTO, Jaiane da Silva. Análise da diversidade genética voltada à conservação do cavalo marinho Hippocampus patagonicus no litoral do Brasil. 2019. 48 f. Dissertação (Programa de Pós-Graduação em Ecologia) - Universidade Federal Rural de Pernambuco, Recife.http://www.tede2.ufrpe.br:8080/tede2/handle/tede2/8256Seahorses are highly endangered fish worldwide. Among the causes pointed in decline of populations is indiscriminate fishing on non-target organisms, the bycatch. More 95% of seahorses present in international trade come from this type of fishing. Considering the high impact this anthropic action on H. patatagonicus, the knowledge of genetic diversity and the population structure in regions of intense fishing activity can help to take conservation measures. Here we evaluate this information for part of the species distribution, especially with analysis of animals captured by bycatch along the coast of Rio de Janeiro, where fishing activity is intense. The genetic information has been accessed by mitochondrial data from partial sequencing of 652 bp cytochrome oxidase gene subunit I (COI) and the nuclear genome, from four primers Inter Simple Sequence Repeat (ISSR). The 30 COI sequences obtained here for the samples RJ were analyzed together with GenBank database for individuals of Rio Grande do Sul (RS) and Argentina (AR) showing increased genetic distance for the samples of RJ in relation to the other two populations. In interpopulational analysis, the RJ samples were also the ones with the highest diversity. The analysis of similarity by Neighbor-joining and the model of the number of Kimura 2 parameters and the Baps separated into groups monophyletic the populations of RJ of those of RS and RA. Molecular analysis of variance (AMOVA) also showed high population structure (Fst = 48.68), also separating the samples. The ISSR data revealed 74 loci, all polymorphic for the 60 individuals analyzed. The intrapopulation genetic distance was smaller for the individuals of the Macaé and Joatinga groups up to Ilha Grande, and higher for the samples from Ilha Rasa to Santana Island. The similarity analysis by Neighbor-joining, the model number of differences together with Evanno test and Bayesian analysis made through Structure, defined distinct genetic patterns, almost separating them into monophyletic groups. AMOVA revealed a high population structure for the species studied (Fst = 34.33). Genetic differentiation H. patagonicus along the coast of Rio de Janeiro reflects the importance of genetic studies not only in macro scale, as well as in micro-regional, reflecting the importance of this type of analysis as a way to support correct management actions aimed at conservation species that are in danger of extinction. This population structure and the high genetic diversity of RJ samples support the importance of conservation of the seahorses of this locality from an evolutionary point of view, revealing the uniqueness there genetic patrimony observed.Os cavalos marinhos são peixes altamente ameaçados de extinção no mundo inteiro. Entre as causas apontadas para o declínio de suas populações está a pesca indiscriminada sobre organismos não alvos, o bycatch. Mais de 95% dos cavalos-marinhos presentes no comércio internacional são oriundos deste tipo de pesca. Considerando o alto impacto desta ação antrópica sobre H. patatagonicus, o conhecimento da diversidade genética e da estruturação populacional em regiões de intensa atividade pesqueira pode auxiliar na tomada de medidas conservacionistas. Aqui avaliamos estas informações para a distribuição da espécie, com um maior foco para a análise de animais capturados por bycatch ao longo da costa do Rio de Janeiro, onde a atividade pesqueira é intensa. As informações genéticas foram obtidas por dados mitocondriais, a partir do sequenciamento parcial de 652 pb do gene citocromo oxidase subunidade I (COI) e pelo genoma nuclear, a partir de quatro primers de Inter Simple Sequence Repeat (ISSR). As 30 sequências de COI aqui obtidas para as amostras do RJ foram analisadas conjuntamente com as depositadas no GenBank para indivíduos do Rio Grande do Sul (RS) e da Argentina (AR), revelando maior distância genética para as amostras do RJ em relação as outras duas populações. Na análise interpopulacional as amostras do RJ também foram as que apresentaram maior diversidade. A análise de similaridade por Neighbor-joining e o modelo do número de Kimura 2 parâmetros e o Baps separou em grupos monofiléticos as populações do RJ daquelas do RS e da AR. A análise molecular da variância (AMOVA) também demonstrou alta estruturação populacional (Fst=48.68), separando igualmente as amostras. Os dados de ISSR revelaram 74 loci, todos polimórficos para os 60 indivíduos analisados. A distância genética intrapopulacional foi menor para os indivíduos dos grupos Macaé e Joatinga até Ilha Grande, e maior para as amostras de Ilha Rasa até Ilha de Santana. A análise de similaridade por Neighbor-joining, o modelo do número de diferenças, juntamente com teste de Evanno e análise Baysiana feitos através do Structure, definiu padrões genéticos distintos. A AMOVA revelou alta estruturação populacional para a espécie estudada (Fst = 34.33). A diferenciação genética de H. patagonicus ao longo da costa do Rio de Janeiro reflete a importância dos estudos genéticos realizados não só em escala macro, como também microrregional, denotando a importância deste tipo de análise como forma de subsidiar ações corretas de manejo voltadas a conservação de espécies que se encontram em perigo de extinção. Essa alta estruturação populacional e a alta diversidade genética das amostras do RJ sustentam a importância de conservação dos cavalos-marinhos desta localidade sob o ponto de vista evolutivo, revelando a singularidade do patrimônio genético ali observado.Submitted by Mario BC (mario@bc.ufrpe.br) on 2019-10-09T13:38:26Z No. of bitstreams: 1 Jaiane da Silva Nascimento.pdf: 1124577 bytes, checksum: d8a6d7e71bd1fb74691d375a61ec254a (MD5)Made available in DSpace on 2019-10-09T13:38:26Z (GMT). No. of bitstreams: 1 Jaiane da Silva Nascimento.pdf: 1124577 bytes, checksum: d8a6d7e71bd1fb74691d375a61ec254a (MD5) Previous issue date: 2019-06-27application/pdfporUniversidade Federal Rural de PernambucoPrograma de Pós-Graduação em EcologiaUFRPEBrasilDepartamento de BiologiaHippocampus patagonicusCavalo marinhoDiversidade genéticaCIENCIAS BIOLOGICAS::ECOLOGIAAnálise da diversidade genética voltada à conservação do cavalo marinho Hippocampus patagonicus no litoral do Brasilinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesis-3370416653406378150600600600-26967445355890967003263499605295365002info:eu-repo/semantics/openAccessreponame:Biblioteca Digital de Teses e Dissertações da UFRPEinstname:Universidade Federal Rural de Pernambuco (UFRPE)instacron:UFRPEORIGINALJaiane da Silva Nascimento.pdfJaiane da Silva Nascimento.pdfapplication/pdf1124577http://www.tede2.ufrpe.br:8080/tede2/bitstream/tede2/8256/2/Jaiane+da+Silva+Nascimento.pdfd8a6d7e71bd1fb74691d375a61ec254aMD52LICENSElicense.txtlicense.txttext/plain; charset=utf-82165http://www.tede2.ufrpe.br:8080/tede2/bitstream/tede2/8256/1/license.txtbd3efa91386c1718a7f26a329fdcb468MD51tede2/82562019-10-09 10:38:26.89oai:tede2: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Biblioteca Digital de Teses e Dissertaçõeshttp://www.tede2.ufrpe.br:8080/tede/PUBhttp://www.tede2.ufrpe.br:8080/oai/requestbdtd@ufrpe.br ||bdtd@ufrpe.bropendoar:2024-05-28T12:36:44.444824Biblioteca Digital de Teses e Dissertações da UFRPE - Universidade Federal Rural de Pernambuco (UFRPE)false
dc.title.por.fl_str_mv Análise da diversidade genética voltada à conservação do cavalo marinho Hippocampus patagonicus no litoral do Brasil
title Análise da diversidade genética voltada à conservação do cavalo marinho Hippocampus patagonicus no litoral do Brasil
spellingShingle Análise da diversidade genética voltada à conservação do cavalo marinho Hippocampus patagonicus no litoral do Brasil
NASCIMENTO, Jaiane da Silva
Hippocampus patagonicus
Cavalo marinho
Diversidade genética
CIENCIAS BIOLOGICAS::ECOLOGIA
title_short Análise da diversidade genética voltada à conservação do cavalo marinho Hippocampus patagonicus no litoral do Brasil
title_full Análise da diversidade genética voltada à conservação do cavalo marinho Hippocampus patagonicus no litoral do Brasil
title_fullStr Análise da diversidade genética voltada à conservação do cavalo marinho Hippocampus patagonicus no litoral do Brasil
title_full_unstemmed Análise da diversidade genética voltada à conservação do cavalo marinho Hippocampus patagonicus no litoral do Brasil
title_sort Análise da diversidade genética voltada à conservação do cavalo marinho Hippocampus patagonicus no litoral do Brasil
author NASCIMENTO, Jaiane da Silva
author_facet NASCIMENTO, Jaiane da Silva
author_role author
dc.contributor.advisor1.fl_str_mv MONTES, Martín Alejandro
dc.contributor.advisor-co1.fl_str_mv GARCIA, Ana Cristina Lauer
dc.contributor.advisor-co2.fl_str_mv SILVEIRA, Rosana Beatriz
dc.contributor.referee1.fl_str_mv MONTES, Martín Alejandro
dc.contributor.referee2.fl_str_mv AMORIM, Igor Costa de
dc.contributor.referee3.fl_str_mv GOMES, Paula Braga
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/3425063166878315
dc.contributor.author.fl_str_mv NASCIMENTO, Jaiane da Silva
contributor_str_mv MONTES, Martín Alejandro
GARCIA, Ana Cristina Lauer
SILVEIRA, Rosana Beatriz
MONTES, Martín Alejandro
AMORIM, Igor Costa de
GOMES, Paula Braga
dc.subject.por.fl_str_mv Hippocampus patagonicus
Cavalo marinho
Diversidade genética
topic Hippocampus patagonicus
Cavalo marinho
Diversidade genética
CIENCIAS BIOLOGICAS::ECOLOGIA
dc.subject.cnpq.fl_str_mv CIENCIAS BIOLOGICAS::ECOLOGIA
description Seahorses are highly endangered fish worldwide. Among the causes pointed in decline of populations is indiscriminate fishing on non-target organisms, the bycatch. More 95% of seahorses present in international trade come from this type of fishing. Considering the high impact this anthropic action on H. patatagonicus, the knowledge of genetic diversity and the population structure in regions of intense fishing activity can help to take conservation measures. Here we evaluate this information for part of the species distribution, especially with analysis of animals captured by bycatch along the coast of Rio de Janeiro, where fishing activity is intense. The genetic information has been accessed by mitochondrial data from partial sequencing of 652 bp cytochrome oxidase gene subunit I (COI) and the nuclear genome, from four primers Inter Simple Sequence Repeat (ISSR). The 30 COI sequences obtained here for the samples RJ were analyzed together with GenBank database for individuals of Rio Grande do Sul (RS) and Argentina (AR) showing increased genetic distance for the samples of RJ in relation to the other two populations. In interpopulational analysis, the RJ samples were also the ones with the highest diversity. The analysis of similarity by Neighbor-joining and the model of the number of Kimura 2 parameters and the Baps separated into groups monophyletic the populations of RJ of those of RS and RA. Molecular analysis of variance (AMOVA) also showed high population structure (Fst = 48.68), also separating the samples. The ISSR data revealed 74 loci, all polymorphic for the 60 individuals analyzed. The intrapopulation genetic distance was smaller for the individuals of the Macaé and Joatinga groups up to Ilha Grande, and higher for the samples from Ilha Rasa to Santana Island. The similarity analysis by Neighbor-joining, the model number of differences together with Evanno test and Bayesian analysis made through Structure, defined distinct genetic patterns, almost separating them into monophyletic groups. AMOVA revealed a high population structure for the species studied (Fst = 34.33). Genetic differentiation H. patagonicus along the coast of Rio de Janeiro reflects the importance of genetic studies not only in macro scale, as well as in micro-regional, reflecting the importance of this type of analysis as a way to support correct management actions aimed at conservation species that are in danger of extinction. This population structure and the high genetic diversity of RJ samples support the importance of conservation of the seahorses of this locality from an evolutionary point of view, revealing the uniqueness there genetic patrimony observed.
publishDate 2019
dc.date.accessioned.fl_str_mv 2019-10-09T13:38:26Z
dc.date.issued.fl_str_mv 2019-06-27
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
format masterThesis
status_str publishedVersion
dc.identifier.citation.fl_str_mv NASCIMENTO, Jaiane da Silva. Análise da diversidade genética voltada à conservação do cavalo marinho Hippocampus patagonicus no litoral do Brasil. 2019. 48 f. Dissertação (Programa de Pós-Graduação em Ecologia) - Universidade Federal Rural de Pernambuco, Recife.
dc.identifier.uri.fl_str_mv http://www.tede2.ufrpe.br:8080/tede2/handle/tede2/8256
identifier_str_mv NASCIMENTO, Jaiane da Silva. Análise da diversidade genética voltada à conservação do cavalo marinho Hippocampus patagonicus no litoral do Brasil. 2019. 48 f. Dissertação (Programa de Pós-Graduação em Ecologia) - Universidade Federal Rural de Pernambuco, Recife.
url http://www.tede2.ufrpe.br:8080/tede2/handle/tede2/8256
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language por
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dc.relation.confidence.fl_str_mv 600
600
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dc.relation.cnpq.fl_str_mv 3263499605295365002
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.publisher.initials.fl_str_mv UFRPE
dc.publisher.country.fl_str_mv Brasil
dc.publisher.department.fl_str_mv Departamento de Biologia
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