Simbiose entre Crotalaria spp. e bactérias de nódulos naturalmente estabelecidas em solos da Zona da Mata de Pernambuco

Detalhes bibliográficos
Autor(a) principal: OLIVEIRA, Jéssica Rafaella de Sousa
Data de Publicação: 2021
Tipo de documento: Tese
Idioma: por
Título da fonte: Biblioteca Digital de Teses e Dissertações da UFRPE
Texto Completo: http://www.tede2.ufrpe.br:8080/tede2/handle/tede2/8835
Resumo: Brazil is experiencing the greatest success in the use of biological nitrogen fixation (FBN) in agricultural systems and, recently, has been positioning itself on the international scene with the description of new species of rhizobia. The diversity of combinations of types and soil cover makes the Zona da Mata of Pernambuco a region with great potential for studies of rhizobia ecology and for the search for new elite strains for biological nitrogen fixation (FBN). This project aims to estimate the occurrence and diversity of nodule bacteria from different species of the Crotalaria genus to make a collection available for obtaining inoculants for recommendation for green manure in soils in the Zona da Mata of Pernambuco. Initially, a representative sampling of the different edaphoclimatic conditions of the Zona-da-Mata de Pernambuco was carried out, encompassing soils of the main types and uses of soil in the region, at points defined according to the class requirements and soil cover. The soil classes were selected at the 1st categorical level, namely: ARGISSOLO, LATOSSOLO and GLEISSOLO, which together represent about 85% of the region's soils. Four types of vegetation cover, which are predominant in the Zona-da-Mata de Pernambuco, were defined: 1) cultivation with sugarcane; 2) capoeira; 3) other agricultural uses and 4) native vegetation (forest). The natural occurrence of populations of bacteria capable of forming nodules with three species of Crotalaria spp., As well as the development of plants grown in the collected soil samples were determined in experiments carried out in pots in a greenhouse. This experiment was also used as a bait plant test to isolate nodule bacteria from plants grown in soil samples representative of each situation. A collection of 505 nodule bacteria was obtained, which was characterized phenotypically in YMA culture medium. In isolates representative of the phenotypic groups used, an initial genetic profile of the populations naturally established in the studied soils was traced, through the evaluation of the genetic variability of the isolates using the techniques of BOX-PCR and Restriction Analysis of Amplified Ribosomal DNA (ARDRA). The joint analysis of the restriction profiles of the 16S rRNA, obtained from the endonucleases: Alu I, Xba I, Apa I, Xho I, Rsa I, Hae III and Nde I allowed the formation of groups of isolates with similarity, and according to with the distribution of the strains, it consisted of the separation of the isolates in the soil classes. This grouping points to genetic variability of the isolates and indicates a possible existence of taxonomic, among the isolates obtained, not yet known in the literature.
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spelling FREITAS, Ana Dolores Santiago deCUNHA, Mariangela Hungria daSANTOS, Carolina Etienne de Rosália e SilvaLIRA JUNIOR, Mario de AndradeMARTINS, Lindete Míria VieiraLEITE, JaksonCOSTA, Diogo Paes dahttp://lattes.cnpq.br/1141310989027732OLIVEIRA, Jéssica Rafaella de Sousa2023-02-14T20:34:05Z2021-02-26OLIVEIRA, Jéssica Rafaella de Sousa. Simbiose entre Crotalaria spp. e bactérias de nódulos naturalmente estabelecidas em solos da Zona da Mata de Pernambuco. 2021. 100 f. Tese (Programa de Pós-Graduação em Ciência do Solo) - Universidade Federal Rural de Pernambuco, Recife.http://www.tede2.ufrpe.br:8080/tede2/handle/tede2/8835Brazil is experiencing the greatest success in the use of biological nitrogen fixation (FBN) in agricultural systems and, recently, has been positioning itself on the international scene with the description of new species of rhizobia. The diversity of combinations of types and soil cover makes the Zona da Mata of Pernambuco a region with great potential for studies of rhizobia ecology and for the search for new elite strains for biological nitrogen fixation (FBN). This project aims to estimate the occurrence and diversity of nodule bacteria from different species of the Crotalaria genus to make a collection available for obtaining inoculants for recommendation for green manure in soils in the Zona da Mata of Pernambuco. Initially, a representative sampling of the different edaphoclimatic conditions of the Zona-da-Mata de Pernambuco was carried out, encompassing soils of the main types and uses of soil in the region, at points defined according to the class requirements and soil cover. The soil classes were selected at the 1st categorical level, namely: ARGISSOLO, LATOSSOLO and GLEISSOLO, which together represent about 85% of the region's soils. Four types of vegetation cover, which are predominant in the Zona-da-Mata de Pernambuco, were defined: 1) cultivation with sugarcane; 2) capoeira; 3) other agricultural uses and 4) native vegetation (forest). The natural occurrence of populations of bacteria capable of forming nodules with three species of Crotalaria spp., As well as the development of plants grown in the collected soil samples were determined in experiments carried out in pots in a greenhouse. This experiment was also used as a bait plant test to isolate nodule bacteria from plants grown in soil samples representative of each situation. A collection of 505 nodule bacteria was obtained, which was characterized phenotypically in YMA culture medium. In isolates representative of the phenotypic groups used, an initial genetic profile of the populations naturally established in the studied soils was traced, through the evaluation of the genetic variability of the isolates using the techniques of BOX-PCR and Restriction Analysis of Amplified Ribosomal DNA (ARDRA). The joint analysis of the restriction profiles of the 16S rRNA, obtained from the endonucleases: Alu I, Xba I, Apa I, Xho I, Rsa I, Hae III and Nde I allowed the formation of groups of isolates with similarity, and according to with the distribution of the strains, it consisted of the separation of the isolates in the soil classes. This grouping points to genetic variability of the isolates and indicates a possible existence of taxonomic, among the isolates obtained, not yet known in the literature.O Brasil experimenta o maior sucesso de uso da fixação biológica de nitrogênio (FBN) em sistemas agrícolas e, recentemente, vem se posicionando no cenário internacional com a descrição de novas espécies de rizóbios. A diversidade de combinações de tipos e coberturas de solo tornam a Zona da Mata de Pernambuco uma região com grande potencial para estudos de ecologia de rizóbios e para buscas de novas estirpes elites para a fixação biológica de nitrogênio (FBN). Este trabalho tem como objetivo estimar a ocorrência e a diversidade de bactérias de nódulos de diferentes espécies do gênero Crotalaria para disponibilização de uma coleção e futura obtenção de incoculantes recomendáveis para adubação verde em solos da Zona da Mata de Pernambuco. Inicialmente, foi realizada uma amostragem representativa das diferentes condições edafoclimáticas da Zona-da-Mata de Pernambuco, englobando solos dos principais tipos e usos de solo na região, em pontos definidos de acordo com os requisitos classe e cobertura vegetal do solo. As classes de solo foram selecionadas no 1º nível categórico, a saber: ARGISSOLO, LATOSSOLO e GLEISSOLO, que, juntas, representam em torno de 85% dos solos da região. Quatro tipos de coberturas vegetais, que são as predominantes na Zona-da-Mata de Pernambuco, foram definidos: 1) cultivo com cana-de-açúcar; 2) capoeira; 3) outros usos agropecuários e 4) vegetação nativa (mata). A ocorrência natural de populações de bactérias capazes de formar nódulos com três espécies de Crotalaria spp., assim como o desenvolvimento das plantas cultivadas nas amostras de solos coletadas foram determinados em experimentos realizados em vasos em casa de vegetação. Este experimento também foi utilizado como ensaio de plantas iscas para isolar bactérias de nódulos das plantas cultivadas nas amostras de solo representativas de cada situação. Foi obtida uma coleção de 505 isolados de nódulos, que foi caracterizada fenotipicamente em meio de cultura YMA. Em isolados representativos dos grupos fenotípicos utilizados, foi traçado um perfil genético inicial das populações naturalmente estabelecidas nos solos estudados, por meio da avaliação da variabilidade genética dos isolados utilizando as técnicas de BOX-PCR e Análise de Restrição do DNA Ribossomal Amplificado (ARDRA). A análise conjunta dos perfis de restrição do 16S rRNA, obtida a partir das endonucleases: Alu I, Xba I, Apa I, Xho I, Rsa I, Hae III e Nde I permitiu a formação de grupos de isolados com similaridade, e de acordo com a distribuição das estirpes referência, consistiu na separação dos isolados nas classes de solos. Este agrupamento aponta variabilidade genética dos isolados e indica uma possível existência de grupos taxonômicos, dentre os isolados obtidos, ainda não conhecidos pela literatura.Submitted by (lucia.rodrigues@ufrpe.br) on 2023-02-14T20:34:05Z No. of bitstreams: 1 Jessica Rafaella de Sousa Oliveira.pdf: 2091077 bytes, checksum: c6b17b2b6966a1a41730337eb8148fba (MD5)Made available in DSpace on 2023-02-14T20:34:05Z (GMT). No. of bitstreams: 1 Jessica Rafaella de Sousa Oliveira.pdf: 2091077 bytes, checksum: c6b17b2b6966a1a41730337eb8148fba (MD5) Previous issue date: 2021-02-26application/pdfporUniversidade Federal Rural de PernambucoPrograma de Pós-Graduação em Ciência do SoloUFRPEBrasilDepartamento de AgronomiaSimbioseLeguminosaFixação biológica de nitrogênioCrotalaria spp.SoloPernambuco (BR)BactériaAGRONOMIA::CIENCIA DO SOLOSimbiose entre Crotalaria spp. e bactérias de nódulos naturalmente estabelecidas em solos da Zona da Mata de Pernambucoinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesis8551734419043507650600600600-6800553879972229205-5919840527232375671info:eu-repo/semantics/openAccessreponame:Biblioteca Digital de Teses e Dissertações da UFRPEinstname:Universidade Federal Rural de Pernambuco (UFRPE)instacron:UFRPEORIGINALJessica Rafaella de Sousa Oliveira.pdfJessica Rafaella de Sousa Oliveira.pdfapplication/pdf2091077http://www.tede2.ufrpe.br:8080/tede2/bitstream/tede2/8835/2/Jessica+Rafaella+de+Sousa+Oliveira.pdfc6b17b2b6966a1a41730337eb8148fbaMD52LICENSElicense.txtlicense.txttext/plain; charset=utf-82165http://www.tede2.ufrpe.br:8080/tede2/bitstream/tede2/8835/1/license.txtbd3efa91386c1718a7f26a329fdcb468MD51tede2/88352023-02-14 17:34:05.503oai:tede2: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Biblioteca Digital de Teses e Dissertaçõeshttp://www.tede2.ufrpe.br:8080/tede/PUBhttp://www.tede2.ufrpe.br:8080/oai/requestbdtd@ufrpe.br ||bdtd@ufrpe.bropendoar:2024-05-28T12:37:29.550959Biblioteca Digital de Teses e Dissertações da UFRPE - Universidade Federal Rural de Pernambuco (UFRPE)false
dc.title.por.fl_str_mv Simbiose entre Crotalaria spp. e bactérias de nódulos naturalmente estabelecidas em solos da Zona da Mata de Pernambuco
title Simbiose entre Crotalaria spp. e bactérias de nódulos naturalmente estabelecidas em solos da Zona da Mata de Pernambuco
spellingShingle Simbiose entre Crotalaria spp. e bactérias de nódulos naturalmente estabelecidas em solos da Zona da Mata de Pernambuco
OLIVEIRA, Jéssica Rafaella de Sousa
Simbiose
Leguminosa
Fixação biológica de nitrogênio
Crotalaria spp.
Solo
Pernambuco (BR)
Bactéria
AGRONOMIA::CIENCIA DO SOLO
title_short Simbiose entre Crotalaria spp. e bactérias de nódulos naturalmente estabelecidas em solos da Zona da Mata de Pernambuco
title_full Simbiose entre Crotalaria spp. e bactérias de nódulos naturalmente estabelecidas em solos da Zona da Mata de Pernambuco
title_fullStr Simbiose entre Crotalaria spp. e bactérias de nódulos naturalmente estabelecidas em solos da Zona da Mata de Pernambuco
title_full_unstemmed Simbiose entre Crotalaria spp. e bactérias de nódulos naturalmente estabelecidas em solos da Zona da Mata de Pernambuco
title_sort Simbiose entre Crotalaria spp. e bactérias de nódulos naturalmente estabelecidas em solos da Zona da Mata de Pernambuco
author OLIVEIRA, Jéssica Rafaella de Sousa
author_facet OLIVEIRA, Jéssica Rafaella de Sousa
author_role author
dc.contributor.advisor1.fl_str_mv FREITAS, Ana Dolores Santiago de
dc.contributor.advisor-co1.fl_str_mv CUNHA, Mariangela Hungria da
dc.contributor.advisor-co2.fl_str_mv SANTOS, Carolina Etienne de Rosália e Silva
dc.contributor.referee1.fl_str_mv LIRA JUNIOR, Mario de Andrade
dc.contributor.referee2.fl_str_mv MARTINS, Lindete Míria Vieira
dc.contributor.referee3.fl_str_mv LEITE, Jakson
dc.contributor.referee4.fl_str_mv COSTA, Diogo Paes da
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/1141310989027732
dc.contributor.author.fl_str_mv OLIVEIRA, Jéssica Rafaella de Sousa
contributor_str_mv FREITAS, Ana Dolores Santiago de
CUNHA, Mariangela Hungria da
SANTOS, Carolina Etienne de Rosália e Silva
LIRA JUNIOR, Mario de Andrade
MARTINS, Lindete Míria Vieira
LEITE, Jakson
COSTA, Diogo Paes da
dc.subject.por.fl_str_mv Simbiose
Leguminosa
Fixação biológica de nitrogênio
Crotalaria spp.
Solo
Pernambuco (BR)
Bactéria
topic Simbiose
Leguminosa
Fixação biológica de nitrogênio
Crotalaria spp.
Solo
Pernambuco (BR)
Bactéria
AGRONOMIA::CIENCIA DO SOLO
dc.subject.cnpq.fl_str_mv AGRONOMIA::CIENCIA DO SOLO
description Brazil is experiencing the greatest success in the use of biological nitrogen fixation (FBN) in agricultural systems and, recently, has been positioning itself on the international scene with the description of new species of rhizobia. The diversity of combinations of types and soil cover makes the Zona da Mata of Pernambuco a region with great potential for studies of rhizobia ecology and for the search for new elite strains for biological nitrogen fixation (FBN). This project aims to estimate the occurrence and diversity of nodule bacteria from different species of the Crotalaria genus to make a collection available for obtaining inoculants for recommendation for green manure in soils in the Zona da Mata of Pernambuco. Initially, a representative sampling of the different edaphoclimatic conditions of the Zona-da-Mata de Pernambuco was carried out, encompassing soils of the main types and uses of soil in the region, at points defined according to the class requirements and soil cover. The soil classes were selected at the 1st categorical level, namely: ARGISSOLO, LATOSSOLO and GLEISSOLO, which together represent about 85% of the region's soils. Four types of vegetation cover, which are predominant in the Zona-da-Mata de Pernambuco, were defined: 1) cultivation with sugarcane; 2) capoeira; 3) other agricultural uses and 4) native vegetation (forest). The natural occurrence of populations of bacteria capable of forming nodules with three species of Crotalaria spp., As well as the development of plants grown in the collected soil samples were determined in experiments carried out in pots in a greenhouse. This experiment was also used as a bait plant test to isolate nodule bacteria from plants grown in soil samples representative of each situation. A collection of 505 nodule bacteria was obtained, which was characterized phenotypically in YMA culture medium. In isolates representative of the phenotypic groups used, an initial genetic profile of the populations naturally established in the studied soils was traced, through the evaluation of the genetic variability of the isolates using the techniques of BOX-PCR and Restriction Analysis of Amplified Ribosomal DNA (ARDRA). The joint analysis of the restriction profiles of the 16S rRNA, obtained from the endonucleases: Alu I, Xba I, Apa I, Xho I, Rsa I, Hae III and Nde I allowed the formation of groups of isolates with similarity, and according to with the distribution of the strains, it consisted of the separation of the isolates in the soil classes. This grouping points to genetic variability of the isolates and indicates a possible existence of taxonomic, among the isolates obtained, not yet known in the literature.
publishDate 2021
dc.date.issued.fl_str_mv 2021-02-26
dc.date.accessioned.fl_str_mv 2023-02-14T20:34:05Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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dc.identifier.citation.fl_str_mv OLIVEIRA, Jéssica Rafaella de Sousa. Simbiose entre Crotalaria spp. e bactérias de nódulos naturalmente estabelecidas em solos da Zona da Mata de Pernambuco. 2021. 100 f. Tese (Programa de Pós-Graduação em Ciência do Solo) - Universidade Federal Rural de Pernambuco, Recife.
dc.identifier.uri.fl_str_mv http://www.tede2.ufrpe.br:8080/tede2/handle/tede2/8835
identifier_str_mv OLIVEIRA, Jéssica Rafaella de Sousa. Simbiose entre Crotalaria spp. e bactérias de nódulos naturalmente estabelecidas em solos da Zona da Mata de Pernambuco. 2021. 100 f. Tese (Programa de Pós-Graduação em Ciência do Solo) - Universidade Federal Rural de Pernambuco, Recife.
url http://www.tede2.ufrpe.br:8080/tede2/handle/tede2/8835
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dc.publisher.none.fl_str_mv Universidade Federal Rural de Pernambuco
dc.publisher.program.fl_str_mv Programa de Pós-Graduação em Ciência do Solo
dc.publisher.initials.fl_str_mv UFRPE
dc.publisher.country.fl_str_mv Brasil
dc.publisher.department.fl_str_mv Departamento de Agronomia
publisher.none.fl_str_mv Universidade Federal Rural de Pernambuco
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