Caracterização biológica, morfológica e molecular de isolados de Colletotrichum spp. associados à antracnose da cebola

Detalhes bibliográficos
Autor(a) principal: LOPES, Luiz Henrique Rocha
Data de Publicação: 2015
Tipo de documento: Dissertação
Idioma: por
Título da fonte: Biblioteca Digital de Teses e Dissertações da UFRPE
Texto Completo: http://www.tede2.ufrpe.br:8080/tede2/handle/tede2/6618
Resumo: One of the main onion crop diseases in Brazil is anthracnose, caused by especies of genus Colletotrichum. In this work it was used several Colletotrichum isolates obtained from plants do Allium genus with symptoms of anthracnose. The isolates were obtained from different regions of Brazil and characterized with the aid of morphological methods, molecular and cultural features. The Bayesian Analysis Method of inference was used for an initial analysis involving the genomic region β-tubulin (tub2). A representative group of isolates, selected in the first analysis, was sequenced for the partial region of actin (act) and ApMat. Two groups of haplotypes were generated and analyzed separately, one by concatenating tub2 and act and Other tub2, act and ApMat. The analysis revealed along with morphological analyzes that onion anthracnose is probably caused by several Colletotrichum species belonging to complexes acutatum and gloesporioides. All the representative isolates used in this study were pathogenic on onion, being able to cause of induce typical symptoms of anthracnose, especially on bulbs with variable aggressiveness range. All the results obtained in this work lead us to believe that onion anthracnose is caused by several species different of what has been reported so far.
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spelling REIS, AiltonBOITEUX, Leonardo SilvaNOVA, Meiriana Xavier VilaMARIANO, Rosa de Lima RamosGAMA, Marcus Aurélio Siqueira dahttp://lattes.cnpq.br/7635171557248074LOPES, Luiz Henrique Rocha2017-03-21T14:38:30Z2015-07-27LOPES, Luiz Henrique Rocha. Caracterização biológica, morfológica e molecular de isolados de Colletotrichum spp. associados à antracnose da cebola. 2015. 64 f. Dissertação (Programa de Pós-Graduação em Fitopatologia) - Universidade Federal Rural de Pernambuco, Recife.http://www.tede2.ufrpe.br:8080/tede2/handle/tede2/6618One of the main onion crop diseases in Brazil is anthracnose, caused by especies of genus Colletotrichum. In this work it was used several Colletotrichum isolates obtained from plants do Allium genus with symptoms of anthracnose. The isolates were obtained from different regions of Brazil and characterized with the aid of morphological methods, molecular and cultural features. The Bayesian Analysis Method of inference was used for an initial analysis involving the genomic region β-tubulin (tub2). A representative group of isolates, selected in the first analysis, was sequenced for the partial region of actin (act) and ApMat. Two groups of haplotypes were generated and analyzed separately, one by concatenating tub2 and act and Other tub2, act and ApMat. The analysis revealed along with morphological analyzes that onion anthracnose is probably caused by several Colletotrichum species belonging to complexes acutatum and gloesporioides. All the representative isolates used in this study were pathogenic on onion, being able to cause of induce typical symptoms of anthracnose, especially on bulbs with variable aggressiveness range. All the results obtained in this work lead us to believe that onion anthracnose is caused by several species different of what has been reported so far.Uma das principais doenças no cultivo de cebola no Brasil é a antracnose, causada por espécies do gênero Colletotrichum. Neste trabalho foram utilizados 42 isolados obtidos de plantas do gênero Allium com sintomas de antracnose de todas as regiões geográficas do Brasil e caracterizados com o auxílio de métodos morfológicos, moleculares e de características culturais. O método de análise de inferência Bayesiana foi utilizado para uma análise inicial envolvendo o gene β-tubulina (tub2). Um outro grupo, oriundo desta análise, foi seqüenciado para os genes parciais actina (act) e ApMat. Dois grupos de haplótipos foram gerados e analisados separadamente, um concatenando tub2 e act e outro tub2, act e ApMat. A análise revelou juntamente com análises morfológicas que a antracnose em cebola é causada, por várias espécies inseridas dentro dos complexos acutatum e gloesporioides. Todos os isolados representativos usados no estudo foram patogênicos sendo capazes de induzir sintomas típicos de antracnose, sobretudo em bulbos de cebola com variação de agressividade. Todas as informações deste trabalho levam a crer que, a antracnose em cebola é causada por um conjunto de espécies, diferente do que se tem relatado até o momento.Submitted by (lucia.rodrigues@ufrpe.br) on 2017-03-21T14:38:30Z No. of bitstreams: 1 Luiz Henrique Rocha Lopes.pdf: 2118185 bytes, checksum: 93ff9ca19a00eb532e526f9d4c773b3a (MD5)Made available in DSpace on 2017-03-21T14:38:30Z (GMT). No. of bitstreams: 1 Luiz Henrique Rocha Lopes.pdf: 2118185 bytes, checksum: 93ff9ca19a00eb532e526f9d4c773b3a (MD5) Previous issue date: 2015-07-27application/pdfporUniversidade Federal Rural de PernambucoPrograma de Pós-Graduação em FitopatologiaUFRPEBrasilDepartamento de AgronomiaAntracnoseMal-de-sete-voltasAlliumApmatFilogenia multilocusAnthracnoseOnion twisterMultilocus phylogenyFITOSSANIDADE::FITOPATOLOGIACaracterização biológica, morfológica e molecular de isolados de Colletotrichum spp. associados à antracnose da cebolainfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesis1343367238723626701600600600-6800553879972229205-6207026424523013504info:eu-repo/semantics/openAccessreponame:Biblioteca Digital de Teses e Dissertações da UFRPEinstname:Universidade Federal Rural de Pernambuco (UFRPE)instacron:UFRPELICENSElicense.txtlicense.txttext/plain; charset=utf-82165http://www.tede2.ufrpe.br:8080/tede2/bitstream/tede2/6618/1/license.txtbd3efa91386c1718a7f26a329fdcb468MD51ORIGINALLuiz Henrique Rocha Lopes.pdfLuiz Henrique Rocha Lopes.pdfapplication/pdf2118185http://www.tede2.ufrpe.br:8080/tede2/bitstream/tede2/6618/2/Luiz+Henrique+Rocha+Lopes.pdf93ff9ca19a00eb532e526f9d4c773b3aMD52tede2/66182017-03-21 11:38:30.256oai:tede2: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Biblioteca Digital de Teses e Dissertaçõeshttp://www.tede2.ufrpe.br:8080/tede/PUBhttp://www.tede2.ufrpe.br:8080/oai/requestbdtd@ufrpe.br ||bdtd@ufrpe.bropendoar:2017-03-21T14:38:30Biblioteca Digital de Teses e Dissertações da UFRPE - Universidade Federal Rural de Pernambuco (UFRPE)false
dc.title.por.fl_str_mv Caracterização biológica, morfológica e molecular de isolados de Colletotrichum spp. associados à antracnose da cebola
title Caracterização biológica, morfológica e molecular de isolados de Colletotrichum spp. associados à antracnose da cebola
spellingShingle Caracterização biológica, morfológica e molecular de isolados de Colletotrichum spp. associados à antracnose da cebola
LOPES, Luiz Henrique Rocha
Antracnose
Mal-de-sete-voltas
Allium
Apmat
Filogenia multilocus
Anthracnose
Onion twister
Multilocus phylogeny
FITOSSANIDADE::FITOPATOLOGIA
title_short Caracterização biológica, morfológica e molecular de isolados de Colletotrichum spp. associados à antracnose da cebola
title_full Caracterização biológica, morfológica e molecular de isolados de Colletotrichum spp. associados à antracnose da cebola
title_fullStr Caracterização biológica, morfológica e molecular de isolados de Colletotrichum spp. associados à antracnose da cebola
title_full_unstemmed Caracterização biológica, morfológica e molecular de isolados de Colletotrichum spp. associados à antracnose da cebola
title_sort Caracterização biológica, morfológica e molecular de isolados de Colletotrichum spp. associados à antracnose da cebola
author LOPES, Luiz Henrique Rocha
author_facet LOPES, Luiz Henrique Rocha
author_role author
dc.contributor.advisor1.fl_str_mv REIS, Ailton
dc.contributor.advisor-co1.fl_str_mv BOITEUX, Leonardo Silva
dc.contributor.referee1.fl_str_mv NOVA, Meiriana Xavier Vila
dc.contributor.referee2.fl_str_mv MARIANO, Rosa de Lima Ramos
dc.contributor.referee3.fl_str_mv GAMA, Marcus Aurélio Siqueira da
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/7635171557248074
dc.contributor.author.fl_str_mv LOPES, Luiz Henrique Rocha
contributor_str_mv REIS, Ailton
BOITEUX, Leonardo Silva
NOVA, Meiriana Xavier Vila
MARIANO, Rosa de Lima Ramos
GAMA, Marcus Aurélio Siqueira da
dc.subject.por.fl_str_mv Antracnose
Mal-de-sete-voltas
Allium
Apmat
Filogenia multilocus
topic Antracnose
Mal-de-sete-voltas
Allium
Apmat
Filogenia multilocus
Anthracnose
Onion twister
Multilocus phylogeny
FITOSSANIDADE::FITOPATOLOGIA
dc.subject.eng.fl_str_mv Anthracnose
Onion twister
Multilocus phylogeny
dc.subject.cnpq.fl_str_mv FITOSSANIDADE::FITOPATOLOGIA
description One of the main onion crop diseases in Brazil is anthracnose, caused by especies of genus Colletotrichum. In this work it was used several Colletotrichum isolates obtained from plants do Allium genus with symptoms of anthracnose. The isolates were obtained from different regions of Brazil and characterized with the aid of morphological methods, molecular and cultural features. The Bayesian Analysis Method of inference was used for an initial analysis involving the genomic region β-tubulin (tub2). A representative group of isolates, selected in the first analysis, was sequenced for the partial region of actin (act) and ApMat. Two groups of haplotypes were generated and analyzed separately, one by concatenating tub2 and act and Other tub2, act and ApMat. The analysis revealed along with morphological analyzes that onion anthracnose is probably caused by several Colletotrichum species belonging to complexes acutatum and gloesporioides. All the representative isolates used in this study were pathogenic on onion, being able to cause of induce typical symptoms of anthracnose, especially on bulbs with variable aggressiveness range. All the results obtained in this work lead us to believe that onion anthracnose is caused by several species different of what has been reported so far.
publishDate 2015
dc.date.issued.fl_str_mv 2015-07-27
dc.date.accessioned.fl_str_mv 2017-03-21T14:38:30Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
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dc.identifier.citation.fl_str_mv LOPES, Luiz Henrique Rocha. Caracterização biológica, morfológica e molecular de isolados de Colletotrichum spp. associados à antracnose da cebola. 2015. 64 f. Dissertação (Programa de Pós-Graduação em Fitopatologia) - Universidade Federal Rural de Pernambuco, Recife.
dc.identifier.uri.fl_str_mv http://www.tede2.ufrpe.br:8080/tede2/handle/tede2/6618
identifier_str_mv LOPES, Luiz Henrique Rocha. Caracterização biológica, morfológica e molecular de isolados de Colletotrichum spp. associados à antracnose da cebola. 2015. 64 f. Dissertação (Programa de Pós-Graduação em Fitopatologia) - Universidade Federal Rural de Pernambuco, Recife.
url http://www.tede2.ufrpe.br:8080/tede2/handle/tede2/6618
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dc.publisher.country.fl_str_mv Brasil
dc.publisher.department.fl_str_mv Departamento de Agronomia
publisher.none.fl_str_mv Universidade Federal Rural de Pernambuco
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