Dental workers in front-line of COVID-19: an in silico evaluation targeting their prevention
Autor(a) principal: | |
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Data de Publicação: | 2021 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Journal of applied oral science (Online) |
DOI: | 10.1590/1678-7757-2020-0678 |
Texto Completo: | https://www.revistas.usp.br/jaos/article/view/187213 |
Resumo: | SARS-CoV-2 has high human-human transmission rate. The aerosols and saliva droplets are the main contamination source. Thus, it is crucial to point out that dental practitioners become a high-risk group of contagion by SARS-CoV-2. Based on this, protocols have been recommended to avoid cross-contamination during dental care; however, appropriate evidence has not yet been established. Objective: Our study sought to make a screening, by in silico analysis, of the potential of mouth rinses used in dental practices to prevent the dental workers' contamination by SARS-CoV-2. Methodology: Multiple sequence comparisons and construction of the phylogenetic tree were conducted using the FASTA code. Therefore, molecular docking investigation between SARS-CoV-2 proteins (Main Protease, Spike Glycoprotein, Non-structure Protein, and Papain-like Protease) and molecules used in dental practices (chlorhexidine digluconate, hydrogen peroxide, cetylpyridinium chloride, povidone-iodine, gallic acid, β-cyclodextrin, catechin, and quercetin) was performed using AutoDock Vina. Moreover, 2D interactions of the complex protein-ligand structure were analyzed by Ligplot+. Results: The obtained results showed a remarkable affinity between SARS-CoV-2 proteins and all tested compounds. The chlorhexidine digluconate, catechin, and quercetin presented a higher affinity with SARS-CoV-2. Conclusions: The overall results allowed us to suggest that chlorhexidine is the most suitable active compound in reducing the SARS-CoV-2 salivary load due to its better binding energy. However, in vivo studies should be conducted to confirm their clinical use. |
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Journal of applied oral science (Online) |
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Dental workers in front-line of COVID-19: an in silico evaluation targeting their preventionMolecular docking simulationSevere acute respiratory syndrome-related coronavirusPractice management, DentalContainment of biohazardsSARS-CoV-2 has high human-human transmission rate. The aerosols and saliva droplets are the main contamination source. Thus, it is crucial to point out that dental practitioners become a high-risk group of contagion by SARS-CoV-2. Based on this, protocols have been recommended to avoid cross-contamination during dental care; however, appropriate evidence has not yet been established. Objective: Our study sought to make a screening, by in silico analysis, of the potential of mouth rinses used in dental practices to prevent the dental workers' contamination by SARS-CoV-2. Methodology: Multiple sequence comparisons and construction of the phylogenetic tree were conducted using the FASTA code. Therefore, molecular docking investigation between SARS-CoV-2 proteins (Main Protease, Spike Glycoprotein, Non-structure Protein, and Papain-like Protease) and molecules used in dental practices (chlorhexidine digluconate, hydrogen peroxide, cetylpyridinium chloride, povidone-iodine, gallic acid, β-cyclodextrin, catechin, and quercetin) was performed using AutoDock Vina. Moreover, 2D interactions of the complex protein-ligand structure were analyzed by Ligplot+. Results: The obtained results showed a remarkable affinity between SARS-CoV-2 proteins and all tested compounds. The chlorhexidine digluconate, catechin, and quercetin presented a higher affinity with SARS-CoV-2. Conclusions: The overall results allowed us to suggest that chlorhexidine is the most suitable active compound in reducing the SARS-CoV-2 salivary load due to its better binding energy. However, in vivo studies should be conducted to confirm their clinical use.Universidade de São Paulo. Faculdade de Odontologia de Bauru2021-06-14info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://www.revistas.usp.br/jaos/article/view/18721310.1590/1678-7757-2020-0678Journal of Applied Oral Science; Vol. 29 (2021); e20200678Journal of Applied Oral Science; Vol. 29 (2021); e20200678Journal of Applied Oral Science; v. 29 (2021); e202006781678-77651678-7757reponame:Journal of applied oral science (Online)instname:Universidade de São Paulo (USP)instacron:USPenghttps://www.revistas.usp.br/jaos/article/view/187213/173022Copyright (c) 2021 Journal of Applied Oral Sciencehttp://creativecommons.org/licenses/by/4.0info:eu-repo/semantics/openAccessSette-de-Souza, Pedro HenriqueCosta, Moan Jéfter FernandesAmaral-Machado, Lucas Araújo, Fábio Andrey da Costa Almeida-Filho, Adauto TrigueiroLima, Luiza Rayanna Amorim de2021-06-14T21:39:53Zoai:revistas.usp.br:article/187213Revistahttp://www.scielo.br/jaosPUBhttps://www.revistas.usp.br/jaos/oai||jaos@usp.br1678-77651678-7757opendoar:2021-06-14T21:39:53Journal of applied oral science (Online) - Universidade de São Paulo (USP)false |
dc.title.none.fl_str_mv |
Dental workers in front-line of COVID-19: an in silico evaluation targeting their prevention |
title |
Dental workers in front-line of COVID-19: an in silico evaluation targeting their prevention |
spellingShingle |
Dental workers in front-line of COVID-19: an in silico evaluation targeting their prevention Dental workers in front-line of COVID-19: an in silico evaluation targeting their prevention Sette-de-Souza, Pedro Henrique Molecular docking simulation Severe acute respiratory syndrome-related coronavirus Practice management, Dental Containment of biohazards Sette-de-Souza, Pedro Henrique Molecular docking simulation Severe acute respiratory syndrome-related coronavirus Practice management, Dental Containment of biohazards |
title_short |
Dental workers in front-line of COVID-19: an in silico evaluation targeting their prevention |
title_full |
Dental workers in front-line of COVID-19: an in silico evaluation targeting their prevention |
title_fullStr |
Dental workers in front-line of COVID-19: an in silico evaluation targeting their prevention Dental workers in front-line of COVID-19: an in silico evaluation targeting their prevention |
title_full_unstemmed |
Dental workers in front-line of COVID-19: an in silico evaluation targeting their prevention Dental workers in front-line of COVID-19: an in silico evaluation targeting their prevention |
title_sort |
Dental workers in front-line of COVID-19: an in silico evaluation targeting their prevention |
author |
Sette-de-Souza, Pedro Henrique |
author_facet |
Sette-de-Souza, Pedro Henrique Sette-de-Souza, Pedro Henrique Costa, Moan Jéfter Fernandes Amaral-Machado, Lucas Araújo, Fábio Andrey da Costa Almeida-Filho, Adauto Trigueiro Lima, Luiza Rayanna Amorim de Costa, Moan Jéfter Fernandes Amaral-Machado, Lucas Araújo, Fábio Andrey da Costa Almeida-Filho, Adauto Trigueiro Lima, Luiza Rayanna Amorim de |
author_role |
author |
author2 |
Costa, Moan Jéfter Fernandes Amaral-Machado, Lucas Araújo, Fábio Andrey da Costa Almeida-Filho, Adauto Trigueiro Lima, Luiza Rayanna Amorim de |
author2_role |
author author author author author |
dc.contributor.author.fl_str_mv |
Sette-de-Souza, Pedro Henrique Costa, Moan Jéfter Fernandes Amaral-Machado, Lucas Araújo, Fábio Andrey da Costa Almeida-Filho, Adauto Trigueiro Lima, Luiza Rayanna Amorim de |
dc.subject.por.fl_str_mv |
Molecular docking simulation Severe acute respiratory syndrome-related coronavirus Practice management, Dental Containment of biohazards |
topic |
Molecular docking simulation Severe acute respiratory syndrome-related coronavirus Practice management, Dental Containment of biohazards |
description |
SARS-CoV-2 has high human-human transmission rate. The aerosols and saliva droplets are the main contamination source. Thus, it is crucial to point out that dental practitioners become a high-risk group of contagion by SARS-CoV-2. Based on this, protocols have been recommended to avoid cross-contamination during dental care; however, appropriate evidence has not yet been established. Objective: Our study sought to make a screening, by in silico analysis, of the potential of mouth rinses used in dental practices to prevent the dental workers' contamination by SARS-CoV-2. Methodology: Multiple sequence comparisons and construction of the phylogenetic tree were conducted using the FASTA code. Therefore, molecular docking investigation between SARS-CoV-2 proteins (Main Protease, Spike Glycoprotein, Non-structure Protein, and Papain-like Protease) and molecules used in dental practices (chlorhexidine digluconate, hydrogen peroxide, cetylpyridinium chloride, povidone-iodine, gallic acid, β-cyclodextrin, catechin, and quercetin) was performed using AutoDock Vina. Moreover, 2D interactions of the complex protein-ligand structure were analyzed by Ligplot+. Results: The obtained results showed a remarkable affinity between SARS-CoV-2 proteins and all tested compounds. The chlorhexidine digluconate, catechin, and quercetin presented a higher affinity with SARS-CoV-2. Conclusions: The overall results allowed us to suggest that chlorhexidine is the most suitable active compound in reducing the SARS-CoV-2 salivary load due to its better binding energy. However, in vivo studies should be conducted to confirm their clinical use. |
publishDate |
2021 |
dc.date.none.fl_str_mv |
2021-06-14 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://www.revistas.usp.br/jaos/article/view/187213 10.1590/1678-7757-2020-0678 |
url |
https://www.revistas.usp.br/jaos/article/view/187213 |
identifier_str_mv |
10.1590/1678-7757-2020-0678 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
https://www.revistas.usp.br/jaos/article/view/187213/173022 |
dc.rights.driver.fl_str_mv |
Copyright (c) 2021 Journal of Applied Oral Science http://creativecommons.org/licenses/by/4.0 info:eu-repo/semantics/openAccess |
rights_invalid_str_mv |
Copyright (c) 2021 Journal of Applied Oral Science http://creativecommons.org/licenses/by/4.0 |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Universidade de São Paulo. Faculdade de Odontologia de Bauru |
publisher.none.fl_str_mv |
Universidade de São Paulo. Faculdade de Odontologia de Bauru |
dc.source.none.fl_str_mv |
Journal of Applied Oral Science; Vol. 29 (2021); e20200678 Journal of Applied Oral Science; Vol. 29 (2021); e20200678 Journal of Applied Oral Science; v. 29 (2021); e20200678 1678-7765 1678-7757 reponame:Journal of applied oral science (Online) instname:Universidade de São Paulo (USP) instacron:USP |
instname_str |
Universidade de São Paulo (USP) |
instacron_str |
USP |
institution |
USP |
reponame_str |
Journal of applied oral science (Online) |
collection |
Journal of applied oral science (Online) |
repository.name.fl_str_mv |
Journal of applied oral science (Online) - Universidade de São Paulo (USP) |
repository.mail.fl_str_mv |
||jaos@usp.br |
_version_ |
1822179118372880384 |
dc.identifier.doi.none.fl_str_mv |
10.1590/1678-7757-2020-0678 |