Survey of fungi associated with cassava root rot from different producing regions in Brazil

Detalhes bibliográficos
Autor(a) principal: Boas,Sandielle Araújo Vilas
Data de Publicação: 2017
Outros Autores: Oliveira,Saulo Alves Santos de, Bragança,Carlos Augusto Dórea, Ramos,Juliana Barros, Oliveira,Eder Jorge de
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Scientia Agrícola (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-90162017000100060
Resumo: ABSTRACT: Although root rot is one of the major diseases affecting Brazilian cassava (Manihot esculenta Crantz.), little is known about the diversity of root rot pathogens. In this study, diseased plants exhibiting root rot symptoms were collected from cassava-producing regions in five Brazilian states: Bahia, Sergipe, Paraíba, Maranhão, Tocantins, and Paraná. Seventy isolates were obtained and assigned to species complexes based on rDNA's ITS (internal transcribed spacer of the ribosomal DNA) region (ITS1, ITS2 and 5.8S). A total of seven species complexes was found belonging to the genus Fusarium (56/74), followed by Lasiodiplodia (8/74), Neoscytalidium (6/74), and Diaporthe/Phomopsis complex (2/74), Phytophthora, and Corallomycetella (1/74 each). These species were distributed differently according to sample locations and states, but overall, the F. solani species complex (FSSC) was the most prevalent. A number of phylogenetic lineages had not been previously reported as being associated with cassava-root rot disease, such as: F. graminearum (FGSC), F. incarnatum-equiseti (FIESC) and F. chlamydosporum (FCSC) complexes, and a phylogenetic lineage most closely related to P. phaseolorum. Results suggest the need to improve knowledge of the species associated with cassava, including multilocus phylogeny for a more specific characterization, and differences in the resistance background associated with these species, as a strategy to incorporate resistance to multiple pathogens in cassava breeding programs.
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spelling Survey of fungi associated with cassava root rot from different producing regions in BrazilManihot esculentaITS barcodephylogenysoil-borne diseasesABSTRACT: Although root rot is one of the major diseases affecting Brazilian cassava (Manihot esculenta Crantz.), little is known about the diversity of root rot pathogens. In this study, diseased plants exhibiting root rot symptoms were collected from cassava-producing regions in five Brazilian states: Bahia, Sergipe, Paraíba, Maranhão, Tocantins, and Paraná. Seventy isolates were obtained and assigned to species complexes based on rDNA's ITS (internal transcribed spacer of the ribosomal DNA) region (ITS1, ITS2 and 5.8S). A total of seven species complexes was found belonging to the genus Fusarium (56/74), followed by Lasiodiplodia (8/74), Neoscytalidium (6/74), and Diaporthe/Phomopsis complex (2/74), Phytophthora, and Corallomycetella (1/74 each). These species were distributed differently according to sample locations and states, but overall, the F. solani species complex (FSSC) was the most prevalent. A number of phylogenetic lineages had not been previously reported as being associated with cassava-root rot disease, such as: F. graminearum (FGSC), F. incarnatum-equiseti (FIESC) and F. chlamydosporum (FCSC) complexes, and a phylogenetic lineage most closely related to P. phaseolorum. Results suggest the need to improve knowledge of the species associated with cassava, including multilocus phylogeny for a more specific characterization, and differences in the resistance background associated with these species, as a strategy to incorporate resistance to multiple pathogens in cassava breeding programs.Escola Superior de Agricultura "Luiz de Queiroz"2017-02-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-90162017000100060Scientia Agricola v.74 n.1 2017reponame:Scientia Agrícola (Online)instname:Universidade de São Paulo (USP)instacron:USP10.1590/0103-9016-2015-0366info:eu-repo/semantics/openAccessBoas,Sandielle Araújo VilasOliveira,Saulo Alves Santos deBragança,Carlos Augusto DóreaRamos,Juliana BarrosOliveira,Eder Jorge deeng2016-11-29T00:00:00Zoai:scielo:S0103-90162017000100060Revistahttp://revistas.usp.br/sa/indexPUBhttps://old.scielo.br/oai/scielo-oai.phpscientia@usp.br||alleoni@usp.br1678-992X0103-9016opendoar:2016-11-29T00:00Scientia Agrícola (Online) - Universidade de São Paulo (USP)false
dc.title.none.fl_str_mv Survey of fungi associated with cassava root rot from different producing regions in Brazil
title Survey of fungi associated with cassava root rot from different producing regions in Brazil
spellingShingle Survey of fungi associated with cassava root rot from different producing regions in Brazil
Boas,Sandielle Araújo Vilas
Manihot esculenta
ITS barcode
phylogeny
soil-borne diseases
title_short Survey of fungi associated with cassava root rot from different producing regions in Brazil
title_full Survey of fungi associated with cassava root rot from different producing regions in Brazil
title_fullStr Survey of fungi associated with cassava root rot from different producing regions in Brazil
title_full_unstemmed Survey of fungi associated with cassava root rot from different producing regions in Brazil
title_sort Survey of fungi associated with cassava root rot from different producing regions in Brazil
author Boas,Sandielle Araújo Vilas
author_facet Boas,Sandielle Araújo Vilas
Oliveira,Saulo Alves Santos de
Bragança,Carlos Augusto Dórea
Ramos,Juliana Barros
Oliveira,Eder Jorge de
author_role author
author2 Oliveira,Saulo Alves Santos de
Bragança,Carlos Augusto Dórea
Ramos,Juliana Barros
Oliveira,Eder Jorge de
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Boas,Sandielle Araújo Vilas
Oliveira,Saulo Alves Santos de
Bragança,Carlos Augusto Dórea
Ramos,Juliana Barros
Oliveira,Eder Jorge de
dc.subject.por.fl_str_mv Manihot esculenta
ITS barcode
phylogeny
soil-borne diseases
topic Manihot esculenta
ITS barcode
phylogeny
soil-borne diseases
description ABSTRACT: Although root rot is one of the major diseases affecting Brazilian cassava (Manihot esculenta Crantz.), little is known about the diversity of root rot pathogens. In this study, diseased plants exhibiting root rot symptoms were collected from cassava-producing regions in five Brazilian states: Bahia, Sergipe, Paraíba, Maranhão, Tocantins, and Paraná. Seventy isolates were obtained and assigned to species complexes based on rDNA's ITS (internal transcribed spacer of the ribosomal DNA) region (ITS1, ITS2 and 5.8S). A total of seven species complexes was found belonging to the genus Fusarium (56/74), followed by Lasiodiplodia (8/74), Neoscytalidium (6/74), and Diaporthe/Phomopsis complex (2/74), Phytophthora, and Corallomycetella (1/74 each). These species were distributed differently according to sample locations and states, but overall, the F. solani species complex (FSSC) was the most prevalent. A number of phylogenetic lineages had not been previously reported as being associated with cassava-root rot disease, such as: F. graminearum (FGSC), F. incarnatum-equiseti (FIESC) and F. chlamydosporum (FCSC) complexes, and a phylogenetic lineage most closely related to P. phaseolorum. Results suggest the need to improve knowledge of the species associated with cassava, including multilocus phylogeny for a more specific characterization, and differences in the resistance background associated with these species, as a strategy to incorporate resistance to multiple pathogens in cassava breeding programs.
publishDate 2017
dc.date.none.fl_str_mv 2017-02-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-90162017000100060
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-90162017000100060
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/0103-9016-2015-0366
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Escola Superior de Agricultura "Luiz de Queiroz"
publisher.none.fl_str_mv Escola Superior de Agricultura "Luiz de Queiroz"
dc.source.none.fl_str_mv Scientia Agricola v.74 n.1 2017
reponame:Scientia Agrícola (Online)
instname:Universidade de São Paulo (USP)
instacron:USP
instname_str Universidade de São Paulo (USP)
instacron_str USP
institution USP
reponame_str Scientia Agrícola (Online)
collection Scientia Agrícola (Online)
repository.name.fl_str_mv Scientia Agrícola (Online) - Universidade de São Paulo (USP)
repository.mail.fl_str_mv scientia@usp.br||alleoni@usp.br
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