Use of AFLPS to distinguish landraces of pejibaye (Bactris gasipaes) in brazilian Amazonia

Detalhes bibliográficos
Autor(a) principal: Clement,Charles R.
Data de Publicação: 2002
Outros Autores: Sousa,Nelcimar Reis, Rodrigues,Doriane Picanço, Astolfi-Filho,Spártaco, Moreno,Yolanda Núñez, Pascual,Vicente Torres, Rodríguez,Francisco Javier Gallego
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Scientia Agrícola (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-90162002000400019
Resumo: Although the first inhabitants of western Amazonia domesticated pejibaye (Bactris gasipaes Kunth, Palmae) or peach palm for its fruits, today it is widely planted for its heart-of-palm. Like other domesticates, pejibaye presents a complex hierarchy of landraces developed before the conquest of the Americas. The existence of three landraces (Pará, Solimões, Putumayo) was proposed along the Amazonas and Solimões Rivers, Brazil, based on morphological characteristics. There are some questions remaining about the intermediate landrace being an artifact of the morphometric analysis. AFLPs were used to evaluate the relationships among samples of these putative landraces. DNA was extracted from 99 plants representing 13 populations maintained in the Pejibaye Germplasm Bank, Manaus, AM; six primer combinations generated 245 markers via PCR, which were scored in an ABI Prism 310 sequencer and analyzed with GeneScan Software; Jaccard similarities were estimated and a dendrogram was generated with UPGMA. Two groups of plants were observed in the dendrogram instead of three, and were similar at 0.795. Each group contained two subgroups, similar at 0.815. One group (n=41) contained 73% Pará landrace plants, with one subgroup (n=22) containing 91% Pará, and the other (n=19) containing 53% Pará. The other group (n=58) contained 53% Solimões and 40% Putumayo landrace plants, with one subgroup (n=21) containing 52% Solimões and 43% Putumayo, and the other (n=35) containing 57% Solimões and 37% Putumayo. The first group confirmed the Pará landrace. The second group suggested that the Solimões landrace does not exist, but that the Putumayo landrace extends along the Solimões River to Central Amazonia.
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spelling Use of AFLPS to distinguish landraces of pejibaye (Bactris gasipaes) in brazilian Amazoniamolecular markerspopulation differentiationgenetic resourcesgenetic analysisAlthough the first inhabitants of western Amazonia domesticated pejibaye (Bactris gasipaes Kunth, Palmae) or peach palm for its fruits, today it is widely planted for its heart-of-palm. Like other domesticates, pejibaye presents a complex hierarchy of landraces developed before the conquest of the Americas. The existence of three landraces (Pará, Solimões, Putumayo) was proposed along the Amazonas and Solimões Rivers, Brazil, based on morphological characteristics. There are some questions remaining about the intermediate landrace being an artifact of the morphometric analysis. AFLPs were used to evaluate the relationships among samples of these putative landraces. DNA was extracted from 99 plants representing 13 populations maintained in the Pejibaye Germplasm Bank, Manaus, AM; six primer combinations generated 245 markers via PCR, which were scored in an ABI Prism 310 sequencer and analyzed with GeneScan Software; Jaccard similarities were estimated and a dendrogram was generated with UPGMA. Two groups of plants were observed in the dendrogram instead of three, and were similar at 0.795. Each group contained two subgroups, similar at 0.815. One group (n=41) contained 73% Pará landrace plants, with one subgroup (n=22) containing 91% Pará, and the other (n=19) containing 53% Pará. The other group (n=58) contained 53% Solimões and 40% Putumayo landrace plants, with one subgroup (n=21) containing 52% Solimões and 43% Putumayo, and the other (n=35) containing 57% Solimões and 37% Putumayo. The first group confirmed the Pará landrace. The second group suggested that the Solimões landrace does not exist, but that the Putumayo landrace extends along the Solimões River to Central Amazonia.Escola Superior de Agricultura "Luiz de Queiroz"2002-12-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-90162002000400019Scientia Agricola v.59 n.4 2002reponame:Scientia Agrícola (Online)instname:Universidade de São Paulo (USP)instacron:USP10.1590/S0103-90162002000400019info:eu-repo/semantics/openAccessClement,Charles R.Sousa,Nelcimar ReisRodrigues,Doriane PicançoAstolfi-Filho,SpártacoMoreno,Yolanda NúñezPascual,Vicente TorresRodríguez,Francisco Javier Gallegoeng2002-10-16T00:00:00Zoai:scielo:S0103-90162002000400019Revistahttp://revistas.usp.br/sa/indexPUBhttps://old.scielo.br/oai/scielo-oai.phpscientia@usp.br||alleoni@usp.br1678-992X0103-9016opendoar:2002-10-16T00:00Scientia Agrícola (Online) - Universidade de São Paulo (USP)false
dc.title.none.fl_str_mv Use of AFLPS to distinguish landraces of pejibaye (Bactris gasipaes) in brazilian Amazonia
title Use of AFLPS to distinguish landraces of pejibaye (Bactris gasipaes) in brazilian Amazonia
spellingShingle Use of AFLPS to distinguish landraces of pejibaye (Bactris gasipaes) in brazilian Amazonia
Clement,Charles R.
molecular markers
population differentiation
genetic resources
genetic analysis
title_short Use of AFLPS to distinguish landraces of pejibaye (Bactris gasipaes) in brazilian Amazonia
title_full Use of AFLPS to distinguish landraces of pejibaye (Bactris gasipaes) in brazilian Amazonia
title_fullStr Use of AFLPS to distinguish landraces of pejibaye (Bactris gasipaes) in brazilian Amazonia
title_full_unstemmed Use of AFLPS to distinguish landraces of pejibaye (Bactris gasipaes) in brazilian Amazonia
title_sort Use of AFLPS to distinguish landraces of pejibaye (Bactris gasipaes) in brazilian Amazonia
author Clement,Charles R.
author_facet Clement,Charles R.
Sousa,Nelcimar Reis
Rodrigues,Doriane Picanço
Astolfi-Filho,Spártaco
Moreno,Yolanda Núñez
Pascual,Vicente Torres
Rodríguez,Francisco Javier Gallego
author_role author
author2 Sousa,Nelcimar Reis
Rodrigues,Doriane Picanço
Astolfi-Filho,Spártaco
Moreno,Yolanda Núñez
Pascual,Vicente Torres
Rodríguez,Francisco Javier Gallego
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Clement,Charles R.
Sousa,Nelcimar Reis
Rodrigues,Doriane Picanço
Astolfi-Filho,Spártaco
Moreno,Yolanda Núñez
Pascual,Vicente Torres
Rodríguez,Francisco Javier Gallego
dc.subject.por.fl_str_mv molecular markers
population differentiation
genetic resources
genetic analysis
topic molecular markers
population differentiation
genetic resources
genetic analysis
description Although the first inhabitants of western Amazonia domesticated pejibaye (Bactris gasipaes Kunth, Palmae) or peach palm for its fruits, today it is widely planted for its heart-of-palm. Like other domesticates, pejibaye presents a complex hierarchy of landraces developed before the conquest of the Americas. The existence of three landraces (Pará, Solimões, Putumayo) was proposed along the Amazonas and Solimões Rivers, Brazil, based on morphological characteristics. There are some questions remaining about the intermediate landrace being an artifact of the morphometric analysis. AFLPs were used to evaluate the relationships among samples of these putative landraces. DNA was extracted from 99 plants representing 13 populations maintained in the Pejibaye Germplasm Bank, Manaus, AM; six primer combinations generated 245 markers via PCR, which were scored in an ABI Prism 310 sequencer and analyzed with GeneScan Software; Jaccard similarities were estimated and a dendrogram was generated with UPGMA. Two groups of plants were observed in the dendrogram instead of three, and were similar at 0.795. Each group contained two subgroups, similar at 0.815. One group (n=41) contained 73% Pará landrace plants, with one subgroup (n=22) containing 91% Pará, and the other (n=19) containing 53% Pará. The other group (n=58) contained 53% Solimões and 40% Putumayo landrace plants, with one subgroup (n=21) containing 52% Solimões and 43% Putumayo, and the other (n=35) containing 57% Solimões and 37% Putumayo. The first group confirmed the Pará landrace. The second group suggested that the Solimões landrace does not exist, but that the Putumayo landrace extends along the Solimões River to Central Amazonia.
publishDate 2002
dc.date.none.fl_str_mv 2002-12-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-90162002000400019
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-90162002000400019
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S0103-90162002000400019
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Escola Superior de Agricultura "Luiz de Queiroz"
publisher.none.fl_str_mv Escola Superior de Agricultura "Luiz de Queiroz"
dc.source.none.fl_str_mv Scientia Agricola v.59 n.4 2002
reponame:Scientia Agrícola (Online)
instname:Universidade de São Paulo (USP)
instacron:USP
instname_str Universidade de São Paulo (USP)
instacron_str USP
institution USP
reponame_str Scientia Agrícola (Online)
collection Scientia Agrícola (Online)
repository.name.fl_str_mv Scientia Agrícola (Online) - Universidade de São Paulo (USP)
repository.mail.fl_str_mv scientia@usp.br||alleoni@usp.br
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