The effects of trace elements, cations, and environmental conditions on protocatechuate 3,4-dioxygenase activity

Detalhes bibliográficos
Autor(a) principal: Silva, Andréa Scaramal da
Data de Publicação: 2013
Outros Autores: Jacques, Rodrigo Josemar Seminoti, Andreazza, Robson, Bento, Fátima Menezes, Camargo, Flávio Anastácio de Oliveira
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Scientia Agrícola (Online)
Texto Completo: https://www.revistas.usp.br/sa/article/view/52985
Resumo: Phenanthracene is a highly toxic organic compound capable of contaminating water and soils, and biodegradation is an important tool for remediating polluted environments. This study aimed to evaluate the effects of trace elements, cations, and environmental conditions on the activity of the protocatechol 3,4-dioxygenase (P3,4O) enzyme produced by the isolate Leifsonia sp. in cell-free and immobilized extracts. The isolate was grown in Luria Bertani broth medium (LB) amended with 250 mg L-1 of phenanthrene. Various levels of pH (4.0-9.0), temperature (5-80 °C), time (0-90 min), trace elements (Cu2+, Hg2+ and Fe3+), and cations (Mg2+, Mn2+, K+ and NH4+) were tested to determine which conditions optimized enzyme activity. In general, the immobilized extract exhibited higher enzyme activity than the cell-free extract in the presence of trace elements and cations. Adding iron yielded the highest relative activity for both cell-free and immobilized extracts, with values of 16 and 99 %, respectively. Copper also increased enzyme activity for both cell-free and immobilized extracts, with values of 8 and 44 %, respectively. Enzyme activity in the phosphate buffer was high across a wide range of pH, reaching 80 % in the pH range between 6.5 and 8.0. The optimum temperatures for enzyme activity differed for cell-free and immobilized extracts, with maximum enzyme activity observed at 35 ºC for the cell-free extract and at 55 ºC for the immobilized extract. The cell-free extract of the P3,4O enzyme exhibited high activity only during the first 3 min of incubation, when it showed 50 % relative activity, and dropped to 0 % after 60 min of incubation. By contrast, activity in the immobilized extract was maintained during 90 min of incubation. This isolate has important characteristics for phenanthrene biodegradation, producing high quantities of the P3,4O enzyme that forms part of the most important pathway for PAH biodegradation.
id USP-18_775594a79d6ac97c49014e038200653b
oai_identifier_str oai:revistas.usp.br:article/52985
network_acronym_str USP-18
network_name_str Scientia Agrícola (Online)
repository_id_str
spelling The effects of trace elements, cations, and environmental conditions on protocatechuate 3,4-dioxygenase activity enzyme activityenzyme immobilizationbiodegradationwaste treatment Phenanthracene is a highly toxic organic compound capable of contaminating water and soils, and biodegradation is an important tool for remediating polluted environments. This study aimed to evaluate the effects of trace elements, cations, and environmental conditions on the activity of the protocatechol 3,4-dioxygenase (P3,4O) enzyme produced by the isolate Leifsonia sp. in cell-free and immobilized extracts. The isolate was grown in Luria Bertani broth medium (LB) amended with 250 mg L-1 of phenanthrene. Various levels of pH (4.0-9.0), temperature (5-80 °C), time (0-90 min), trace elements (Cu2+, Hg2+ and Fe3+), and cations (Mg2+, Mn2+, K+ and NH4+) were tested to determine which conditions optimized enzyme activity. In general, the immobilized extract exhibited higher enzyme activity than the cell-free extract in the presence of trace elements and cations. Adding iron yielded the highest relative activity for both cell-free and immobilized extracts, with values of 16 and 99 %, respectively. Copper also increased enzyme activity for both cell-free and immobilized extracts, with values of 8 and 44 %, respectively. Enzyme activity in the phosphate buffer was high across a wide range of pH, reaching 80 % in the pH range between 6.5 and 8.0. The optimum temperatures for enzyme activity differed for cell-free and immobilized extracts, with maximum enzyme activity observed at 35 ºC for the cell-free extract and at 55 ºC for the immobilized extract. The cell-free extract of the P3,4O enzyme exhibited high activity only during the first 3 min of incubation, when it showed 50 % relative activity, and dropped to 0 % after 60 min of incubation. By contrast, activity in the immobilized extract was maintained during 90 min of incubation. This isolate has important characteristics for phenanthrene biodegradation, producing high quantities of the P3,4O enzyme that forms part of the most important pathway for PAH biodegradation. Universidade de São Paulo. Escola Superior de Agricultura Luiz de Queiroz2013-04-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://www.revistas.usp.br/sa/article/view/5298510.1590/S0103-90162013000200002Scientia Agricola; v. 70 n. 2 (2013); 68-73Scientia Agricola; Vol. 70 Núm. 2 (2013); 68-73Scientia Agricola; Vol. 70 No. 2 (2013); 68-731678-992X0103-9016reponame:Scientia Agrícola (Online)instname:Universidade de São Paulo (USP)instacron:USPenghttps://www.revistas.usp.br/sa/article/view/52985/57041Copyright (c) 2015 Scientia Agricolainfo:eu-repo/semantics/openAccessSilva, Andréa Scaramal daJacques, Rodrigo Josemar SeminotiAndreazza, RobsonBento, Fátima MenezesCamargo, Flávio Anastácio de Oliveira2015-07-07T19:19:11Zoai:revistas.usp.br:article/52985Revistahttp://revistas.usp.br/sa/indexPUBhttps://old.scielo.br/oai/scielo-oai.phpscientia@usp.br||alleoni@usp.br1678-992X0103-9016opendoar:2015-07-07T19:19:11Scientia Agrícola (Online) - Universidade de São Paulo (USP)false
dc.title.none.fl_str_mv The effects of trace elements, cations, and environmental conditions on protocatechuate 3,4-dioxygenase activity
title The effects of trace elements, cations, and environmental conditions on protocatechuate 3,4-dioxygenase activity
spellingShingle The effects of trace elements, cations, and environmental conditions on protocatechuate 3,4-dioxygenase activity
Silva, Andréa Scaramal da
enzyme activity
enzyme immobilization
biodegradation
waste treatment
title_short The effects of trace elements, cations, and environmental conditions on protocatechuate 3,4-dioxygenase activity
title_full The effects of trace elements, cations, and environmental conditions on protocatechuate 3,4-dioxygenase activity
title_fullStr The effects of trace elements, cations, and environmental conditions on protocatechuate 3,4-dioxygenase activity
title_full_unstemmed The effects of trace elements, cations, and environmental conditions on protocatechuate 3,4-dioxygenase activity
title_sort The effects of trace elements, cations, and environmental conditions on protocatechuate 3,4-dioxygenase activity
author Silva, Andréa Scaramal da
author_facet Silva, Andréa Scaramal da
Jacques, Rodrigo Josemar Seminoti
Andreazza, Robson
Bento, Fátima Menezes
Camargo, Flávio Anastácio de Oliveira
author_role author
author2 Jacques, Rodrigo Josemar Seminoti
Andreazza, Robson
Bento, Fátima Menezes
Camargo, Flávio Anastácio de Oliveira
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Silva, Andréa Scaramal da
Jacques, Rodrigo Josemar Seminoti
Andreazza, Robson
Bento, Fátima Menezes
Camargo, Flávio Anastácio de Oliveira
dc.subject.por.fl_str_mv enzyme activity
enzyme immobilization
biodegradation
waste treatment
topic enzyme activity
enzyme immobilization
biodegradation
waste treatment
description Phenanthracene is a highly toxic organic compound capable of contaminating water and soils, and biodegradation is an important tool for remediating polluted environments. This study aimed to evaluate the effects of trace elements, cations, and environmental conditions on the activity of the protocatechol 3,4-dioxygenase (P3,4O) enzyme produced by the isolate Leifsonia sp. in cell-free and immobilized extracts. The isolate was grown in Luria Bertani broth medium (LB) amended with 250 mg L-1 of phenanthrene. Various levels of pH (4.0-9.0), temperature (5-80 °C), time (0-90 min), trace elements (Cu2+, Hg2+ and Fe3+), and cations (Mg2+, Mn2+, K+ and NH4+) were tested to determine which conditions optimized enzyme activity. In general, the immobilized extract exhibited higher enzyme activity than the cell-free extract in the presence of trace elements and cations. Adding iron yielded the highest relative activity for both cell-free and immobilized extracts, with values of 16 and 99 %, respectively. Copper also increased enzyme activity for both cell-free and immobilized extracts, with values of 8 and 44 %, respectively. Enzyme activity in the phosphate buffer was high across a wide range of pH, reaching 80 % in the pH range between 6.5 and 8.0. The optimum temperatures for enzyme activity differed for cell-free and immobilized extracts, with maximum enzyme activity observed at 35 ºC for the cell-free extract and at 55 ºC for the immobilized extract. The cell-free extract of the P3,4O enzyme exhibited high activity only during the first 3 min of incubation, when it showed 50 % relative activity, and dropped to 0 % after 60 min of incubation. By contrast, activity in the immobilized extract was maintained during 90 min of incubation. This isolate has important characteristics for phenanthrene biodegradation, producing high quantities of the P3,4O enzyme that forms part of the most important pathway for PAH biodegradation.
publishDate 2013
dc.date.none.fl_str_mv 2013-04-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://www.revistas.usp.br/sa/article/view/52985
10.1590/S0103-90162013000200002
url https://www.revistas.usp.br/sa/article/view/52985
identifier_str_mv 10.1590/S0103-90162013000200002
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv https://www.revistas.usp.br/sa/article/view/52985/57041
dc.rights.driver.fl_str_mv Copyright (c) 2015 Scientia Agricola
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Copyright (c) 2015 Scientia Agricola
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade de São Paulo. Escola Superior de Agricultura Luiz de Queiroz
publisher.none.fl_str_mv Universidade de São Paulo. Escola Superior de Agricultura Luiz de Queiroz
dc.source.none.fl_str_mv Scientia Agricola; v. 70 n. 2 (2013); 68-73
Scientia Agricola; Vol. 70 Núm. 2 (2013); 68-73
Scientia Agricola; Vol. 70 No. 2 (2013); 68-73
1678-992X
0103-9016
reponame:Scientia Agrícola (Online)
instname:Universidade de São Paulo (USP)
instacron:USP
instname_str Universidade de São Paulo (USP)
instacron_str USP
institution USP
reponame_str Scientia Agrícola (Online)
collection Scientia Agrícola (Online)
repository.name.fl_str_mv Scientia Agrícola (Online) - Universidade de São Paulo (USP)
repository.mail.fl_str_mv scientia@usp.br||alleoni@usp.br
_version_ 1800222791931265024