Characterization of Ectomycorrhizal species through molecular biology tools and morphotyping

Detalhes bibliográficos
Autor(a) principal: Clasen, Bárbara Estevão
Data de Publicação: 2018
Outros Autores: Silveira, Andressa de Oliveira, Baldoni, Daiana Bortoluzzi, Montagner, Daiane Fiuza, Jacques, Rodrigo Josemar Seminoti, Antoniolli, Zaida Inês
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Scientia Agrícola (Online)
Texto Completo: https://www.revistas.usp.br/sa/article/view/142952
Resumo: Mycorrhizae are mutualistic associations between fungi and plant roots. These symbiotic associations are abundant and occur in 75 to 80 % of plants. Ectomycorrhizal fungi are very important in ecosystems, because their mutualistic association with plants of different species helps nutrients and water absorption, as well as protection of the host plant against pathogens and abiotic stresses. Most ectomycorrhizal fungi belong to the Basidiomycota class, such as the following genera: Amanita, Hebeloma, Hysterangium, Laccaria, Lactarius, Rhizopogon, Russula, Scleroderma, Suillus, Tricholoma, among others. Morphological studies on ectomycorrhizae report important results in understanding the species biodiversity. However, the use of molecular biology nowadays is indispensable. Among the various molecular tools available, there is consensus about the use of tools based on sequencing of the Internal Transcribed Spacer (ITS) of fungi rDNA, aiding in species characterization and construction of phylogenetic studies. The ITS region is of easy amplification, it has multicopy nature and enables differentiation between species. The objective of this study was to show that the use of molecular biology tools associated with morphotyping to characterize species of ectomycorrhizae is more effective than when they are used on their own.
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spelling Characterization of Ectomycorrhizal species through molecular biology tools and morphotypingPCRectomycorrhizal fungimolecular identificationmorphotype Mycorrhizae are mutualistic associations between fungi and plant roots. These symbiotic associations are abundant and occur in 75 to 80 % of plants. Ectomycorrhizal fungi are very important in ecosystems, because their mutualistic association with plants of different species helps nutrients and water absorption, as well as protection of the host plant against pathogens and abiotic stresses. Most ectomycorrhizal fungi belong to the Basidiomycota class, such as the following genera: Amanita, Hebeloma, Hysterangium, Laccaria, Lactarius, Rhizopogon, Russula, Scleroderma, Suillus, Tricholoma, among others. Morphological studies on ectomycorrhizae report important results in understanding the species biodiversity. However, the use of molecular biology nowadays is indispensable. Among the various molecular tools available, there is consensus about the use of tools based on sequencing of the Internal Transcribed Spacer (ITS) of fungi rDNA, aiding in species characterization and construction of phylogenetic studies. The ITS region is of easy amplification, it has multicopy nature and enables differentiation between species. The objective of this study was to show that the use of molecular biology tools associated with morphotyping to characterize species of ectomycorrhizae is more effective than when they are used on their own.Universidade de São Paulo. Escola Superior de Agricultura Luiz de Queiroz2018-05-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://www.revistas.usp.br/sa/article/view/14295210.1590/1678-992x-2016-0419Scientia Agricola; v. 75 n. 3 (2018); 246-254Scientia Agricola; Vol. 75 Núm. 3 (2018); 246-254Scientia Agricola; Vol. 75 No. 3 (2018); 246-2541678-992X0103-9016reponame:Scientia Agrícola (Online)instname:Universidade de São Paulo (USP)instacron:USPenghttps://www.revistas.usp.br/sa/article/view/142952/137814Copyright (c) 2018 Scientia Agricolainfo:eu-repo/semantics/openAccessClasen, Bárbara EstevãoSilveira, Andressa de OliveiraBaldoni, Daiana BortoluzziMontagner, Daiane FiuzaJacques, Rodrigo Josemar SeminotiAntoniolli, Zaida Inês2018-02-01T17:04:55Zoai:revistas.usp.br:article/142952Revistahttp://revistas.usp.br/sa/indexPUBhttps://old.scielo.br/oai/scielo-oai.phpscientia@usp.br||alleoni@usp.br1678-992X0103-9016opendoar:2018-02-01T17:04:55Scientia Agrícola (Online) - Universidade de São Paulo (USP)false
dc.title.none.fl_str_mv Characterization of Ectomycorrhizal species through molecular biology tools and morphotyping
title Characterization of Ectomycorrhizal species through molecular biology tools and morphotyping
spellingShingle Characterization of Ectomycorrhizal species through molecular biology tools and morphotyping
Clasen, Bárbara Estevão
PCR
ectomycorrhizal fungi
molecular identification
morphotype
title_short Characterization of Ectomycorrhizal species through molecular biology tools and morphotyping
title_full Characterization of Ectomycorrhizal species through molecular biology tools and morphotyping
title_fullStr Characterization of Ectomycorrhizal species through molecular biology tools and morphotyping
title_full_unstemmed Characterization of Ectomycorrhizal species through molecular biology tools and morphotyping
title_sort Characterization of Ectomycorrhizal species through molecular biology tools and morphotyping
author Clasen, Bárbara Estevão
author_facet Clasen, Bárbara Estevão
Silveira, Andressa de Oliveira
Baldoni, Daiana Bortoluzzi
Montagner, Daiane Fiuza
Jacques, Rodrigo Josemar Seminoti
Antoniolli, Zaida Inês
author_role author
author2 Silveira, Andressa de Oliveira
Baldoni, Daiana Bortoluzzi
Montagner, Daiane Fiuza
Jacques, Rodrigo Josemar Seminoti
Antoniolli, Zaida Inês
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Clasen, Bárbara Estevão
Silveira, Andressa de Oliveira
Baldoni, Daiana Bortoluzzi
Montagner, Daiane Fiuza
Jacques, Rodrigo Josemar Seminoti
Antoniolli, Zaida Inês
dc.subject.por.fl_str_mv PCR
ectomycorrhizal fungi
molecular identification
morphotype
topic PCR
ectomycorrhizal fungi
molecular identification
morphotype
description Mycorrhizae are mutualistic associations between fungi and plant roots. These symbiotic associations are abundant and occur in 75 to 80 % of plants. Ectomycorrhizal fungi are very important in ecosystems, because their mutualistic association with plants of different species helps nutrients and water absorption, as well as protection of the host plant against pathogens and abiotic stresses. Most ectomycorrhizal fungi belong to the Basidiomycota class, such as the following genera: Amanita, Hebeloma, Hysterangium, Laccaria, Lactarius, Rhizopogon, Russula, Scleroderma, Suillus, Tricholoma, among others. Morphological studies on ectomycorrhizae report important results in understanding the species biodiversity. However, the use of molecular biology nowadays is indispensable. Among the various molecular tools available, there is consensus about the use of tools based on sequencing of the Internal Transcribed Spacer (ITS) of fungi rDNA, aiding in species characterization and construction of phylogenetic studies. The ITS region is of easy amplification, it has multicopy nature and enables differentiation between species. The objective of this study was to show that the use of molecular biology tools associated with morphotyping to characterize species of ectomycorrhizae is more effective than when they are used on their own.
publishDate 2018
dc.date.none.fl_str_mv 2018-05-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://www.revistas.usp.br/sa/article/view/142952
10.1590/1678-992x-2016-0419
url https://www.revistas.usp.br/sa/article/view/142952
identifier_str_mv 10.1590/1678-992x-2016-0419
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv https://www.revistas.usp.br/sa/article/view/142952/137814
dc.rights.driver.fl_str_mv Copyright (c) 2018 Scientia Agricola
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Copyright (c) 2018 Scientia Agricola
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade de São Paulo. Escola Superior de Agricultura Luiz de Queiroz
publisher.none.fl_str_mv Universidade de São Paulo. Escola Superior de Agricultura Luiz de Queiroz
dc.source.none.fl_str_mv Scientia Agricola; v. 75 n. 3 (2018); 246-254
Scientia Agricola; Vol. 75 Núm. 3 (2018); 246-254
Scientia Agricola; Vol. 75 No. 3 (2018); 246-254
1678-992X
0103-9016
reponame:Scientia Agrícola (Online)
instname:Universidade de São Paulo (USP)
instacron:USP
instname_str Universidade de São Paulo (USP)
instacron_str USP
institution USP
reponame_str Scientia Agrícola (Online)
collection Scientia Agrícola (Online)
repository.name.fl_str_mv Scientia Agrícola (Online) - Universidade de São Paulo (USP)
repository.mail.fl_str_mv scientia@usp.br||alleoni@usp.br
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