Use of nonradioactive labeling to detect large gene rearrangements in 21-hydroxylase deficiency

Detalhes bibliográficos
Autor(a) principal: Cukier,Priscilla
Data de Publicação: 2004
Outros Autores: Bachega,Tânia A. S. S., Mendonça,Berenice B., Billerbeck,Ana Elisa C.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Revista do Hospital das Clínicas
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0041-87812004000600010
Resumo: PURPOSE: To establish the Southern blotting technique using hybridization with a nonradioactive probe to detect large rearrangements of CYP21A2 in a Brazilian cohort with congenital adrenal hyperplasia due to 21-hydroxylase deficiency (CAH-21OH). METHOD: We studied 42 patients, 2 of them related, comprising 80 non-related alleles. DNA samples were obtained from peripheral blood, digested by restriction enzyme Taq I, submitted to Southern blotting and hybridized with biotin-labeled probes. RESULTS: This method was shown to be reliable with results similar to the radioactive-labeling method. We found CYP21A2 deletion (2.5%), large gene conversion (8.8%), CYP21AP deletion (3.8%), and CYP21A1P duplication (6.3%). These frequencies were similar to those found in our previous study in which a large number of cases were studied. Good hybridization patterns were achieved with a smaller amount of DNA (5 mug), and fragment signs were observed after 5 minutes to 1 hour of exposure. CONCLUSIONS: We established a non-radioactive (biotin) Southern blot/hybridization methodology for CYP21A2 large rearrangements with good results. Despite being more arduous, this technique is faster, requires a smaller amount of DNA, and most importantly, avoids problems with the use of radioactivity.
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spelling Use of nonradioactive labeling to detect large gene rearrangements in 21-hydroxylase deficiencyBiotin labelingLarge rearrangementsSouthern blottingCAH-21OHPURPOSE: To establish the Southern blotting technique using hybridization with a nonradioactive probe to detect large rearrangements of CYP21A2 in a Brazilian cohort with congenital adrenal hyperplasia due to 21-hydroxylase deficiency (CAH-21OH). METHOD: We studied 42 patients, 2 of them related, comprising 80 non-related alleles. DNA samples were obtained from peripheral blood, digested by restriction enzyme Taq I, submitted to Southern blotting and hybridized with biotin-labeled probes. RESULTS: This method was shown to be reliable with results similar to the radioactive-labeling method. We found CYP21A2 deletion (2.5%), large gene conversion (8.8%), CYP21AP deletion (3.8%), and CYP21A1P duplication (6.3%). These frequencies were similar to those found in our previous study in which a large number of cases were studied. Good hybridization patterns were achieved with a smaller amount of DNA (5 mug), and fragment signs were observed after 5 minutes to 1 hour of exposure. CONCLUSIONS: We established a non-radioactive (biotin) Southern blot/hybridization methodology for CYP21A2 large rearrangements with good results. Despite being more arduous, this technique is faster, requires a smaller amount of DNA, and most importantly, avoids problems with the use of radioactivity.Faculdade de Medicina / Universidade de São Paulo - FM/USP2004-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0041-87812004000600010Revista do Hospital das Clínicas v.59 n.6 2004reponame:Revista do Hospital das Clínicasinstname:Universidade de São Paulo (USP)instacron:USP10.1590/S0041-87812004000600010info:eu-repo/semantics/openAccessCukier,PriscillaBachega,Tânia A. S. S.Mendonça,Berenice B.Billerbeck,Ana Elisa C.eng2005-02-10T00:00:00Zoai:scielo:S0041-87812004000600010Revistahttp://www.scielo.br/rhcPUBhttps://old.scielo.br/oai/scielo-oai.php||revista.hc@hcnet.usp.br1678-99030041-8781opendoar:2005-02-10T00:00Revista do Hospital das Clínicas - Universidade de São Paulo (USP)false
dc.title.none.fl_str_mv Use of nonradioactive labeling to detect large gene rearrangements in 21-hydroxylase deficiency
title Use of nonradioactive labeling to detect large gene rearrangements in 21-hydroxylase deficiency
spellingShingle Use of nonradioactive labeling to detect large gene rearrangements in 21-hydroxylase deficiency
Cukier,Priscilla
Biotin labeling
Large rearrangements
Southern blotting
CAH-21OH
title_short Use of nonradioactive labeling to detect large gene rearrangements in 21-hydroxylase deficiency
title_full Use of nonradioactive labeling to detect large gene rearrangements in 21-hydroxylase deficiency
title_fullStr Use of nonradioactive labeling to detect large gene rearrangements in 21-hydroxylase deficiency
title_full_unstemmed Use of nonradioactive labeling to detect large gene rearrangements in 21-hydroxylase deficiency
title_sort Use of nonradioactive labeling to detect large gene rearrangements in 21-hydroxylase deficiency
author Cukier,Priscilla
author_facet Cukier,Priscilla
Bachega,Tânia A. S. S.
Mendonça,Berenice B.
Billerbeck,Ana Elisa C.
author_role author
author2 Bachega,Tânia A. S. S.
Mendonça,Berenice B.
Billerbeck,Ana Elisa C.
author2_role author
author
author
dc.contributor.author.fl_str_mv Cukier,Priscilla
Bachega,Tânia A. S. S.
Mendonça,Berenice B.
Billerbeck,Ana Elisa C.
dc.subject.por.fl_str_mv Biotin labeling
Large rearrangements
Southern blotting
CAH-21OH
topic Biotin labeling
Large rearrangements
Southern blotting
CAH-21OH
description PURPOSE: To establish the Southern blotting technique using hybridization with a nonradioactive probe to detect large rearrangements of CYP21A2 in a Brazilian cohort with congenital adrenal hyperplasia due to 21-hydroxylase deficiency (CAH-21OH). METHOD: We studied 42 patients, 2 of them related, comprising 80 non-related alleles. DNA samples were obtained from peripheral blood, digested by restriction enzyme Taq I, submitted to Southern blotting and hybridized with biotin-labeled probes. RESULTS: This method was shown to be reliable with results similar to the radioactive-labeling method. We found CYP21A2 deletion (2.5%), large gene conversion (8.8%), CYP21AP deletion (3.8%), and CYP21A1P duplication (6.3%). These frequencies were similar to those found in our previous study in which a large number of cases were studied. Good hybridization patterns were achieved with a smaller amount of DNA (5 mug), and fragment signs were observed after 5 minutes to 1 hour of exposure. CONCLUSIONS: We established a non-radioactive (biotin) Southern blot/hybridization methodology for CYP21A2 large rearrangements with good results. Despite being more arduous, this technique is faster, requires a smaller amount of DNA, and most importantly, avoids problems with the use of radioactivity.
publishDate 2004
dc.date.none.fl_str_mv 2004-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0041-87812004000600010
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0041-87812004000600010
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S0041-87812004000600010
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Faculdade de Medicina / Universidade de São Paulo - FM/USP
publisher.none.fl_str_mv Faculdade de Medicina / Universidade de São Paulo - FM/USP
dc.source.none.fl_str_mv Revista do Hospital das Clínicas v.59 n.6 2004
reponame:Revista do Hospital das Clínicas
instname:Universidade de São Paulo (USP)
instacron:USP
instname_str Universidade de São Paulo (USP)
instacron_str USP
institution USP
reponame_str Revista do Hospital das Clínicas
collection Revista do Hospital das Clínicas
repository.name.fl_str_mv Revista do Hospital das Clínicas - Universidade de São Paulo (USP)
repository.mail.fl_str_mv ||revista.hc@hcnet.usp.br
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