Phylogenetic diversity patterns reveal contrasting and spatially dependent evolutionary histories in a hyper-diverse montane vegetation complex

Detalhes bibliográficos
Autor(a) principal: Yago Barros de Souza
Data de Publicação: 2021
Tipo de documento: Dissertação
Idioma: eng
Título da fonte: Biblioteca Digital de Teses e Dissertações da USP
Texto Completo: https://doi.org/10.11606/D.59.2021.tde-21062021-161113
Resumo: Old, climatically buffered, infertile landscapes (OCBILs) comprise some of the world\'s most diverse floras. Such floras, according to OCBIL theory, are expected to favour the persistence of old lineages. Nevertheless, recent and fast diversification apparently played a major role in the evolutionary history of a Neotropical OCBIL, the campos rupestres. Here we aimed to elucidate the distribution of concurrent evolutionary processes by assessing fine spatial patterns of phylogenetic diversity and endemism in the campos rupestres. Based on predictions of the OCBIL theory and on the insular nature of this vegetation, we proposed that (1) patterns of phylogenetic overdispersion and paleo-endemism predominate, revealing a flora mainly composed by relatively old lineages. Furthermore, (2) both the taxonomic and the phylogenetic composition should be highly geographically structured if present and past barriers to dispersion have restricted spatial connections between different parts of the campos rupestres. To test those hypotheses, we calculated taxonomic and phylogenetic alpha and beta diversity metrics and conducted categorical analyses of neo- and paleo-endemism (CANAPE) for six campos rupestres\' representative angiosperm groups. Our analyses were based on occurrence data gathered from herbaria databases and on recently published, well-sampled phylogenetic hypotheses. We defined grid cell\'s size according to redundancy values in order to maintain satisfactory sampling rates while preserving spatial resolution. We found that phylogenetic overdispersion predominates in the campos rupestres flora. However, this general pattern is permeated by both lineage- and site-specific phylogenetic clustering, suggesting that recent diversification events depend on particular regional conditions and on the overall maintenance of old lineages across the campos rupestres. CANAPE shows that endemism patterns differ between regions, but paleo-endemism is widespread and particular prominent where phylogenetic overdispersion is more evident. Moreover, although taxonomic composition is highly geographically structured and seems to be influenced by different types of surrounding vegetation, phylogenetic composition indicates past spatial connections that might have been established by different processes. These results highlight the importance of considering the spatial component when investigating diversification patterns and suggest that the flora of old, climatically buffered, infertile landscapes might have been shaped by spatially dependent evolutionary processes.
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spelling info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesis Phylogenetic diversity patterns reveal contrasting and spatially dependent evolutionary histories in a hyper-diverse montane vegetation complex Padrões de diversidade filogenética revelam histórias evolutivas contrastantes e espacialmente dependentes em um complexo vegetacional montanhoso hiper diverso 2021-02-19Leonardo Maurici BorgesSuzette Geertruida Anna FlantuaFernando Augusto de Oliveira e SilveiraRosa Amelia Scherson VicencioYago Barros de SouzaUniversidade de São PauloBiologia ComparadaUSPBR Beta diversity Brazilian Central Plateau Cadeia do Espinhaço Campos rupestres Campos rupestres CANAPE CANAPE Diversidade beta Diversidade beta filogenética Diversidade filogenética Espinhaço Range OCBIL OCBIL Phylobeta diversity Phylogenetic diversity Planalto Central Brasileiro Serra da Canastra Serra da Canastra Old, climatically buffered, infertile landscapes (OCBILs) comprise some of the world\'s most diverse floras. Such floras, according to OCBIL theory, are expected to favour the persistence of old lineages. Nevertheless, recent and fast diversification apparently played a major role in the evolutionary history of a Neotropical OCBIL, the campos rupestres. Here we aimed to elucidate the distribution of concurrent evolutionary processes by assessing fine spatial patterns of phylogenetic diversity and endemism in the campos rupestres. Based on predictions of the OCBIL theory and on the insular nature of this vegetation, we proposed that (1) patterns of phylogenetic overdispersion and paleo-endemism predominate, revealing a flora mainly composed by relatively old lineages. Furthermore, (2) both the taxonomic and the phylogenetic composition should be highly geographically structured if present and past barriers to dispersion have restricted spatial connections between different parts of the campos rupestres. To test those hypotheses, we calculated taxonomic and phylogenetic alpha and beta diversity metrics and conducted categorical analyses of neo- and paleo-endemism (CANAPE) for six campos rupestres\' representative angiosperm groups. Our analyses were based on occurrence data gathered from herbaria databases and on recently published, well-sampled phylogenetic hypotheses. We defined grid cell\'s size according to redundancy values in order to maintain satisfactory sampling rates while preserving spatial resolution. We found that phylogenetic overdispersion predominates in the campos rupestres flora. However, this general pattern is permeated by both lineage- and site-specific phylogenetic clustering, suggesting that recent diversification events depend on particular regional conditions and on the overall maintenance of old lineages across the campos rupestres. CANAPE shows that endemism patterns differ between regions, but paleo-endemism is widespread and particular prominent where phylogenetic overdispersion is more evident. Moreover, although taxonomic composition is highly geographically structured and seems to be influenced by different types of surrounding vegetation, phylogenetic composition indicates past spatial connections that might have been established by different processes. These results highlight the importance of considering the spatial component when investigating diversification patterns and suggest that the flora of old, climatically buffered, infertile landscapes might have been shaped by spatially dependent evolutionary processes. Paisagens antigas, climaticamente tamponadas e inférteis (OCBILs) compreendem algumas das floras mais diversas do mundo. De acordo com a teoria OCBIL, espera-se que tais floras favoreçam a persistência de linhagens antigas. No entanto, eventos rápidos de diversificação recente aparentemente desempenharam um papel importante na história evolutiva de uma OCBIL neotropical, os campos rupestres. Aqui pretendemos elucidar a distribuição de processos evolutivos concorrentes avaliando padrões espaciais de diversidade filogenética e endemismo nos campos rupestres. Com base nas previsões da teoria OCBIL e na natureza insular dos campos rupestres, propomos que (1) padrões de dispersão filogenética e paleo endemismo predominam, revelando uma flora composta principalmente por linhagens relativamente antigas. Além disso, (2) tanto a composição taxonômica quanto a composição filogenética devem ser altamente estruturadas geograficamente se barreiras à dispersão restringiram conexões espaciais entre as diferentes partes dos campos rupestres. Para testar essas hipóteses, calculamos métricas de diversidade alfa e beta taxonômicas e filogenéticas e conduzimos análises categóricas de neo e paleo endemismo (CANAPE) para seis grupos de angiospermas representativos nos campos rupestres. Nossas análises foram baseadas em dados de ocorrência coletados em bancos de dados de herbários e em hipóteses filogenéticas recentemente publicadas e bem amostradas. Definimos o tamanho de quadrículas espaciais de acordo com valores de redundância para manter taxas de amostragem satisfatórias preservando a resolução espacial. Nossos resultados demonstram que dispersão filogenética predomina na flora dos campos rupestres. No entanto, esse padrão geral é permeado por agregação filogenética específica de linhagem e local, sugerindo que eventos de diversificação recentes dependem de condições regionais particulares e da manutenção geral de linhagens antigas nos campos rupestres. Padrões de endemismo diferem entre as regiões, mas paleo endemismo é generalizado e particularmente proeminente onde dispersão filogenética é mais evidente. Além disso, embora a composição taxonômica da flora seja altamente estruturada geograficamente e pareça ser influenciada por diferentes tipos de vegetação circundante, a composição filogenética dos campos rupestres indica conexões espaciais que podem ter sido estabelecidas no passado por diferentes processos. Esses resultados destacam a importância de se considerar o componente espacial ao investigar padrões de diversificação e sugerem que as floras de paisagens antigas, climaticamente tamponadas e inférteis podem ter sido moldadas por processos evolutivos espacialmente dependentes. https://doi.org/10.11606/D.59.2021.tde-21062021-161113info:eu-repo/semantics/openAccessengreponame:Biblioteca Digital de Teses e Dissertações da USPinstname:Universidade de São Paulo (USP)instacron:USP2023-12-21T19:47:03Zoai:teses.usp.br:tde-21062021-161113Biblioteca Digital de Teses e Dissertaçõeshttp://www.teses.usp.br/PUBhttp://www.teses.usp.br/cgi-bin/mtd2br.plvirginia@if.usp.br|| atendimento@aguia.usp.br||virginia@if.usp.bropendoar:27212023-12-22T13:05:18.887990Biblioteca Digital de Teses e Dissertações da USP - Universidade de São Paulo (USP)false
dc.title.en.fl_str_mv Phylogenetic diversity patterns reveal contrasting and spatially dependent evolutionary histories in a hyper-diverse montane vegetation complex
dc.title.alternative.pt.fl_str_mv Padrões de diversidade filogenética revelam histórias evolutivas contrastantes e espacialmente dependentes em um complexo vegetacional montanhoso hiper diverso
title Phylogenetic diversity patterns reveal contrasting and spatially dependent evolutionary histories in a hyper-diverse montane vegetation complex
spellingShingle Phylogenetic diversity patterns reveal contrasting and spatially dependent evolutionary histories in a hyper-diverse montane vegetation complex
Yago Barros de Souza
title_short Phylogenetic diversity patterns reveal contrasting and spatially dependent evolutionary histories in a hyper-diverse montane vegetation complex
title_full Phylogenetic diversity patterns reveal contrasting and spatially dependent evolutionary histories in a hyper-diverse montane vegetation complex
title_fullStr Phylogenetic diversity patterns reveal contrasting and spatially dependent evolutionary histories in a hyper-diverse montane vegetation complex
title_full_unstemmed Phylogenetic diversity patterns reveal contrasting and spatially dependent evolutionary histories in a hyper-diverse montane vegetation complex
title_sort Phylogenetic diversity patterns reveal contrasting and spatially dependent evolutionary histories in a hyper-diverse montane vegetation complex
author Yago Barros de Souza
author_facet Yago Barros de Souza
author_role author
dc.contributor.advisor1.fl_str_mv Leonardo Maurici Borges
dc.contributor.referee1.fl_str_mv Suzette Geertruida Anna Flantua
dc.contributor.referee2.fl_str_mv Fernando Augusto de Oliveira e Silveira
dc.contributor.referee3.fl_str_mv Rosa Amelia Scherson Vicencio
dc.contributor.author.fl_str_mv Yago Barros de Souza
contributor_str_mv Leonardo Maurici Borges
Suzette Geertruida Anna Flantua
Fernando Augusto de Oliveira e Silveira
Rosa Amelia Scherson Vicencio
description Old, climatically buffered, infertile landscapes (OCBILs) comprise some of the world\'s most diverse floras. Such floras, according to OCBIL theory, are expected to favour the persistence of old lineages. Nevertheless, recent and fast diversification apparently played a major role in the evolutionary history of a Neotropical OCBIL, the campos rupestres. Here we aimed to elucidate the distribution of concurrent evolutionary processes by assessing fine spatial patterns of phylogenetic diversity and endemism in the campos rupestres. Based on predictions of the OCBIL theory and on the insular nature of this vegetation, we proposed that (1) patterns of phylogenetic overdispersion and paleo-endemism predominate, revealing a flora mainly composed by relatively old lineages. Furthermore, (2) both the taxonomic and the phylogenetic composition should be highly geographically structured if present and past barriers to dispersion have restricted spatial connections between different parts of the campos rupestres. To test those hypotheses, we calculated taxonomic and phylogenetic alpha and beta diversity metrics and conducted categorical analyses of neo- and paleo-endemism (CANAPE) for six campos rupestres\' representative angiosperm groups. Our analyses were based on occurrence data gathered from herbaria databases and on recently published, well-sampled phylogenetic hypotheses. We defined grid cell\'s size according to redundancy values in order to maintain satisfactory sampling rates while preserving spatial resolution. We found that phylogenetic overdispersion predominates in the campos rupestres flora. However, this general pattern is permeated by both lineage- and site-specific phylogenetic clustering, suggesting that recent diversification events depend on particular regional conditions and on the overall maintenance of old lineages across the campos rupestres. CANAPE shows that endemism patterns differ between regions, but paleo-endemism is widespread and particular prominent where phylogenetic overdispersion is more evident. Moreover, although taxonomic composition is highly geographically structured and seems to be influenced by different types of surrounding vegetation, phylogenetic composition indicates past spatial connections that might have been established by different processes. These results highlight the importance of considering the spatial component when investigating diversification patterns and suggest that the flora of old, climatically buffered, infertile landscapes might have been shaped by spatially dependent evolutionary processes.
publishDate 2021
dc.date.issued.fl_str_mv 2021-02-19
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
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dc.identifier.uri.fl_str_mv https://doi.org/10.11606/D.59.2021.tde-21062021-161113
url https://doi.org/10.11606/D.59.2021.tde-21062021-161113
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.publisher.none.fl_str_mv Universidade de São Paulo
dc.publisher.program.fl_str_mv Biologia Comparada
dc.publisher.initials.fl_str_mv USP
dc.publisher.country.fl_str_mv BR
publisher.none.fl_str_mv Universidade de São Paulo
dc.source.none.fl_str_mv reponame:Biblioteca Digital de Teses e Dissertações da USP
instname:Universidade de São Paulo (USP)
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