Self-organization map in complex network

Detalhes bibliográficos
Autor(a) principal: Mayra Mercedes Zegarra Pimenta
Data de Publicação: 2018
Tipo de documento: Tese
Idioma: eng
Título da fonte: Biblioteca Digital de Teses e Dissertações da USP
Texto Completo: https://doi.org/10.11606/T.55.2018.tde-30102018-111955
Resumo: The Self-Organization Map (SOM) is an artificial neural network that was proposed as a tool for exploratory analysis in large dimensionality data sets, being used efficiently for data mining. One of the main topics of research in this area is related to data clustering applications. Several algorithms have been developed to perform clustering in data sets. However, the accuracy of these algorithms is data depending. This thesis is mainly dedicated to the investigation of the SOM from two different approaches: (i) data mining and (ii) complex networks. From the data mining point of view, we analyzed how the performance of the algorithm is related to the distribution of data properties. It was verified the accuracy of the algorithm based on the configuration of the parameters. Likewise, this thesis shows a comparative analysis between the SOM network and other clustering methods. The results revealed that in random configuration of parameters the SOM algorithm tends to improve its acuracy when the number of classes is small. It was also observed that when considering the default configurations of the adopted methods, the spectral approach usually outperformed the other clustering algorithms. Regarding the complex networks approach, we observed that the network structure has a fundamental influence of the algorithm accuracy. We evaluated the cases at short and middle learning time scales and three different datasets. Furthermore, we show how different topologies also affect the self-organization of the topographic map of SOM network. The self-organization of the network was studied through the partitioning of the map in groups or communities. It was used four topological measures to quantify the structure of the groups such as: modularity, number of elements per group, number of groups per map, size of the largest group in three network models. In small-world (SW) networks, the groups become denser as time increases. An opposite behavior is found in the assortative networks. Finally, we verified that if some perturbation is included in the system, like a rewiring in a SW network and the deactivation model, the system cannot be organized again. Our results enable a better understanding of SOM in terms of parameters and network structure.
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spelling info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesis Self-organization map in complex network Mapas organizativos em redes complexas 2018-06-25Francisco Aparecido RodriguesJose Hiroki SaitoAntonio Carlos Roque da Silva FilhoGonzalo TraviesoMayra Mercedes Zegarra PimentaUniversidade de São PauloCiências da Computação e Matemática ComputacionalUSPBR Algoritmos de agrupamento Clustering algorithm Complex networks Redes complexas Self-organization map SOM The Self-Organization Map (SOM) is an artificial neural network that was proposed as a tool for exploratory analysis in large dimensionality data sets, being used efficiently for data mining. One of the main topics of research in this area is related to data clustering applications. Several algorithms have been developed to perform clustering in data sets. However, the accuracy of these algorithms is data depending. This thesis is mainly dedicated to the investigation of the SOM from two different approaches: (i) data mining and (ii) complex networks. From the data mining point of view, we analyzed how the performance of the algorithm is related to the distribution of data properties. It was verified the accuracy of the algorithm based on the configuration of the parameters. Likewise, this thesis shows a comparative analysis between the SOM network and other clustering methods. The results revealed that in random configuration of parameters the SOM algorithm tends to improve its acuracy when the number of classes is small. It was also observed that when considering the default configurations of the adopted methods, the spectral approach usually outperformed the other clustering algorithms. Regarding the complex networks approach, we observed that the network structure has a fundamental influence of the algorithm accuracy. We evaluated the cases at short and middle learning time scales and three different datasets. Furthermore, we show how different topologies also affect the self-organization of the topographic map of SOM network. The self-organization of the network was studied through the partitioning of the map in groups or communities. It was used four topological measures to quantify the structure of the groups such as: modularity, number of elements per group, number of groups per map, size of the largest group in three network models. In small-world (SW) networks, the groups become denser as time increases. An opposite behavior is found in the assortative networks. Finally, we verified that if some perturbation is included in the system, like a rewiring in a SW network and the deactivation model, the system cannot be organized again. Our results enable a better understanding of SOM in terms of parameters and network structure. Um Mapa Auto-organizativo (da sigla SOM, Self-organized map, em inglês) é uma rede neural artificial que foi proposta como uma ferramenta para análise exploratória em conjuntos de dados de grande dimensionalidade, sendo utilizada de forma eficiente na mineração de dados. Um dos principais tópicos de pesquisa nesta área está relacionado com as aplicações de agrupamento de dados. Vários algoritmos foram desenvolvidos para realizar agrupamento de dados, tendo cada um destes algoritmos uma acurácia específica para determinados tipos de dados. Esta tese tem por objetivo principal analisar a rede SOM a partir de duas abordagens diferentes: mineração de dados e redes complexas. Pela abordagem de mineração de dados, analisou-se como o desempenho do algoritmo está relacionado à distribuição ou características dos dados. Verificou-se a acurácia do algoritmo com base na configuração dos parâmetros. Da mesma forma, esta tese mostra uma análise comparativa entre a rede SOM e outros métodos de agrupamento. Os resultados revelaram que o uso de valores aleatórios nos parâmetros de configuração do algoritmo SOM tende a melhorar sua acurácia quando o número de classes é baixo. Observou-se também que, ao considerar as configurações padrão dos métodos adotados, a abordagem espectral usualmente superou os demais algoritmos de agrupamento. Pela abordagem de redes complexas, esta tese mostra que, se considerarmos outro tipo de topologia de rede, além do modelo regular geralmente utilizado, haverá um impacto na acurácia da rede. Esta tese mostra que o impacto na acurácia é geralmente observado em escalas de tempo de aprendizado curto e médio. Esse comportamento foi observado usando três conjuntos de dados diferentes. Além disso, esta tese mostra como diferentes topologias também afetam a auto-organização do mapa topográfico da rede SOM. A auto-organização da rede foi estudada por meio do particionamento do mapa em grupos ou comunidades. Foram utilizadas quatro medidas topológicas para quantificar a estrutura dos grupos em três modelos distintos de rede: modularidade, número de elementos por grupo, número de grupos por mapa, tamanho do maior grupo. Em redes de pequeno mundo, os grupos se tornam mais densos à medida que o tempo aumenta. Um comportamento oposto a isso é encontrado nas redes assortativas. Apesar da modularidade, tem um alto valor em ambos os casos. https://doi.org/10.11606/T.55.2018.tde-30102018-111955info:eu-repo/semantics/openAccessengreponame:Biblioteca Digital de Teses e Dissertações da USPinstname:Universidade de São Paulo (USP)instacron:USP2023-12-21T20:27:47Zoai:teses.usp.br:tde-30102018-111955Biblioteca Digital de Teses e Dissertaçõeshttp://www.teses.usp.br/PUBhttp://www.teses.usp.br/cgi-bin/mtd2br.plvirginia@if.usp.br|| atendimento@aguia.usp.br||virginia@if.usp.bropendoar:27212023-12-22T13:33:12.120665Biblioteca Digital de Teses e Dissertações da USP - Universidade de São Paulo (USP)false
dc.title.en.fl_str_mv Self-organization map in complex network
dc.title.alternative.pt.fl_str_mv Mapas organizativos em redes complexas
title Self-organization map in complex network
spellingShingle Self-organization map in complex network
Mayra Mercedes Zegarra Pimenta
title_short Self-organization map in complex network
title_full Self-organization map in complex network
title_fullStr Self-organization map in complex network
title_full_unstemmed Self-organization map in complex network
title_sort Self-organization map in complex network
author Mayra Mercedes Zegarra Pimenta
author_facet Mayra Mercedes Zegarra Pimenta
author_role author
dc.contributor.advisor1.fl_str_mv Francisco Aparecido Rodrigues
dc.contributor.referee1.fl_str_mv Jose Hiroki Saito
dc.contributor.referee2.fl_str_mv Antonio Carlos Roque da Silva Filho
dc.contributor.referee3.fl_str_mv Gonzalo Travieso
dc.contributor.author.fl_str_mv Mayra Mercedes Zegarra Pimenta
contributor_str_mv Francisco Aparecido Rodrigues
Jose Hiroki Saito
Antonio Carlos Roque da Silva Filho
Gonzalo Travieso
description The Self-Organization Map (SOM) is an artificial neural network that was proposed as a tool for exploratory analysis in large dimensionality data sets, being used efficiently for data mining. One of the main topics of research in this area is related to data clustering applications. Several algorithms have been developed to perform clustering in data sets. However, the accuracy of these algorithms is data depending. This thesis is mainly dedicated to the investigation of the SOM from two different approaches: (i) data mining and (ii) complex networks. From the data mining point of view, we analyzed how the performance of the algorithm is related to the distribution of data properties. It was verified the accuracy of the algorithm based on the configuration of the parameters. Likewise, this thesis shows a comparative analysis between the SOM network and other clustering methods. The results revealed that in random configuration of parameters the SOM algorithm tends to improve its acuracy when the number of classes is small. It was also observed that when considering the default configurations of the adopted methods, the spectral approach usually outperformed the other clustering algorithms. Regarding the complex networks approach, we observed that the network structure has a fundamental influence of the algorithm accuracy. We evaluated the cases at short and middle learning time scales and three different datasets. Furthermore, we show how different topologies also affect the self-organization of the topographic map of SOM network. The self-organization of the network was studied through the partitioning of the map in groups or communities. It was used four topological measures to quantify the structure of the groups such as: modularity, number of elements per group, number of groups per map, size of the largest group in three network models. In small-world (SW) networks, the groups become denser as time increases. An opposite behavior is found in the assortative networks. Finally, we verified that if some perturbation is included in the system, like a rewiring in a SW network and the deactivation model, the system cannot be organized again. Our results enable a better understanding of SOM in terms of parameters and network structure.
publishDate 2018
dc.date.issued.fl_str_mv 2018-06-25
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/doctoralThesis
format doctoralThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://doi.org/10.11606/T.55.2018.tde-30102018-111955
url https://doi.org/10.11606/T.55.2018.tde-30102018-111955
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Universidade de São Paulo
dc.publisher.program.fl_str_mv Ciências da Computação e Matemática Computacional
dc.publisher.initials.fl_str_mv USP
dc.publisher.country.fl_str_mv BR
publisher.none.fl_str_mv Universidade de São Paulo
dc.source.none.fl_str_mv reponame:Biblioteca Digital de Teses e Dissertações da USP
instname:Universidade de São Paulo (USP)
instacron:USP
instname_str Universidade de São Paulo (USP)
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reponame_str Biblioteca Digital de Teses e Dissertações da USP
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repository.name.fl_str_mv Biblioteca Digital de Teses e Dissertações da USP - Universidade de São Paulo (USP)
repository.mail.fl_str_mv virginia@if.usp.br|| atendimento@aguia.usp.br||virginia@if.usp.br
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