Genetic characterization and population structure of Canela-Preta creole chicken

Detalhes bibliográficos
Autor(a) principal: Carvalho, Débora Araújo de
Data de Publicação: 2016
Outros Autores: Bonafe, Cristina Moreira, Rodriguez-Rodriguez, Maria Del Pilar, Almeida, Marcos Jacob de Oliveira, Sarmento, José Lindenberg Rocha, Britto, Fabio Barros, Silva, Martinho de Almeida e
Tipo de documento: Artigo
Idioma: por
Título da fonte: Pesquisa Agropecuária Brasileira (Online)
Texto Completo: https://seer.sct.embrapa.br/index.php/pab/article/view/23879
Resumo: The objective of this work was to genetically characterize and evaluate the population structure of Canela-Preta creole chicken of three breeding stocks belonging to the municipalities of Teresina, Oeiras and Queimada Nova, in the state of Piauí, Brazil. Twelve microsatellite markers and DNA samples from118 chickens were used. After DNA extraction, the microsatellite markers were amplified by polymerase chain reaction (PCR). Statistical analyses of the observed and expected heterozygosity estimates, analysis of molecular variance, principal components analysis, Wright’s F-statistics, and analysis of population structure based on Bayesian analysis were performed. The analyses of genetic differentiation (using Amova) suggested low differentiation between the evaluated nucleuses, indicating this group as genetically unique. The resultsof the F-statistics indicated endogamy trend of the breeding stocks studied. Scatter plot and Bayesian analysis, used to show the structure of Canela-Preta birds, suggested the existence of four genetic groups and revealed that there is gene flow between the breeding stocks analysed. The evaluated microsatellite molecular markers showed to be polymorphic, which shows high variation in the samples and reveals their effectiveness in the study of characterization. The results indicate that Canela-Preta chickens are genetically structured.
id EMBRAPA-4_7f14f7585e720f0789e3c0d233560b2e
oai_identifier_str oai:ojs.seer.sct.embrapa.br:article/23879
network_acronym_str EMBRAPA-4
network_name_str Pesquisa Agropecuária Brasileira (Online)
repository_id_str
spelling Genetic characterization and population structure of Canela-Preta creole chickenGallus gallus, microsatellites, polymorphism, genetic variabilityThe objective of this work was to genetically characterize and evaluate the population structure of Canela-Preta creole chicken of three breeding stocks belonging to the municipalities of Teresina, Oeiras and Queimada Nova, in the state of Piauí, Brazil. Twelve microsatellite markers and DNA samples from118 chickens were used. After DNA extraction, the microsatellite markers were amplified by polymerase chain reaction (PCR). Statistical analyses of the observed and expected heterozygosity estimates, analysis of molecular variance, principal components analysis, Wright’s F-statistics, and analysis of population structure based on Bayesian analysis were performed. The analyses of genetic differentiation (using Amova) suggested low differentiation between the evaluated nucleuses, indicating this group as genetically unique. The resultsof the F-statistics indicated endogamy trend of the breeding stocks studied. Scatter plot and Bayesian analysis, used to show the structure of Canela-Preta birds, suggested the existence of four genetic groups and revealed that there is gene flow between the breeding stocks analysed. The evaluated microsatellite molecular markers showed to be polymorphic, which shows high variation in the samples and reveals their effectiveness in the study of characterization. The results indicate that Canela-Preta chickens are genetically structured.Pesquisa Agropecuaria BrasileiraPesquisa Agropecuária BrasileiraCoordenação de Aperfeiçoamento de Pessoal de Nível Superior (Capes)Fundação de Amparo à Pesquisa do Estado de Minas Gerais (Fapemig)Carvalho, Débora Araújo deBonafe, Cristina MoreiraRodriguez-Rodriguez, Maria Del PilarAlmeida, Marcos Jacob de OliveiraSarmento, José Lindenberg RochaBritto, Fabio BarrosSilva, Martinho de Almeida e2016-12-23info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://seer.sct.embrapa.br/index.php/pab/article/view/23879Pesquisa Agropecuaria Brasileira; v.51, n.11, nov. 2016; 1899-1906Pesquisa Agropecuária Brasileira; v.51, n.11, nov. 2016; 1899-19061678-39210100-104xreponame:Pesquisa Agropecuária Brasileira (Online)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPAporhttps://seer.sct.embrapa.br/index.php/pab/article/view/23879/13634https://seer.sct.embrapa.br/index.php/pab/article/downloadSuppFile/23879/15816Direitos autorais 2016 Pesquisa Agropecuária Brasileirainfo:eu-repo/semantics/openAccess2016-12-23T12:32:40Zoai:ojs.seer.sct.embrapa.br:article/23879Revistahttp://seer.sct.embrapa.br/index.php/pabPRIhttps://old.scielo.br/oai/scielo-oai.phppab@sct.embrapa.br || sct.pab@embrapa.br1678-39210100-204Xopendoar:2016-12-23T12:32:40Pesquisa Agropecuária Brasileira (Online) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Genetic characterization and population structure of Canela-Preta creole chicken
title Genetic characterization and population structure of Canela-Preta creole chicken
spellingShingle Genetic characterization and population structure of Canela-Preta creole chicken
Carvalho, Débora Araújo de
Gallus gallus, microsatellites, polymorphism, genetic variability
title_short Genetic characterization and population structure of Canela-Preta creole chicken
title_full Genetic characterization and population structure of Canela-Preta creole chicken
title_fullStr Genetic characterization and population structure of Canela-Preta creole chicken
title_full_unstemmed Genetic characterization and population structure of Canela-Preta creole chicken
title_sort Genetic characterization and population structure of Canela-Preta creole chicken
author Carvalho, Débora Araújo de
author_facet Carvalho, Débora Araújo de
Bonafe, Cristina Moreira
Rodriguez-Rodriguez, Maria Del Pilar
Almeida, Marcos Jacob de Oliveira
Sarmento, José Lindenberg Rocha
Britto, Fabio Barros
Silva, Martinho de Almeida e
author_role author
author2 Bonafe, Cristina Moreira
Rodriguez-Rodriguez, Maria Del Pilar
Almeida, Marcos Jacob de Oliveira
Sarmento, José Lindenberg Rocha
Britto, Fabio Barros
Silva, Martinho de Almeida e
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (Capes)
Fundação de Amparo à Pesquisa do Estado de Minas Gerais (Fapemig)
dc.contributor.author.fl_str_mv Carvalho, Débora Araújo de
Bonafe, Cristina Moreira
Rodriguez-Rodriguez, Maria Del Pilar
Almeida, Marcos Jacob de Oliveira
Sarmento, José Lindenberg Rocha
Britto, Fabio Barros
Silva, Martinho de Almeida e
dc.subject.por.fl_str_mv Gallus gallus, microsatellites, polymorphism, genetic variability
topic Gallus gallus, microsatellites, polymorphism, genetic variability
description The objective of this work was to genetically characterize and evaluate the population structure of Canela-Preta creole chicken of three breeding stocks belonging to the municipalities of Teresina, Oeiras and Queimada Nova, in the state of Piauí, Brazil. Twelve microsatellite markers and DNA samples from118 chickens were used. After DNA extraction, the microsatellite markers were amplified by polymerase chain reaction (PCR). Statistical analyses of the observed and expected heterozygosity estimates, analysis of molecular variance, principal components analysis, Wright’s F-statistics, and analysis of population structure based on Bayesian analysis were performed. The analyses of genetic differentiation (using Amova) suggested low differentiation between the evaluated nucleuses, indicating this group as genetically unique. The resultsof the F-statistics indicated endogamy trend of the breeding stocks studied. Scatter plot and Bayesian analysis, used to show the structure of Canela-Preta birds, suggested the existence of four genetic groups and revealed that there is gene flow between the breeding stocks analysed. The evaluated microsatellite molecular markers showed to be polymorphic, which shows high variation in the samples and reveals their effectiveness in the study of characterization. The results indicate that Canela-Preta chickens are genetically structured.
publishDate 2016
dc.date.none.fl_str_mv 2016-12-23
dc.type.none.fl_str_mv
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://seer.sct.embrapa.br/index.php/pab/article/view/23879
url https://seer.sct.embrapa.br/index.php/pab/article/view/23879
dc.language.iso.fl_str_mv por
language por
dc.relation.none.fl_str_mv https://seer.sct.embrapa.br/index.php/pab/article/view/23879/13634
https://seer.sct.embrapa.br/index.php/pab/article/downloadSuppFile/23879/15816
dc.rights.driver.fl_str_mv Direitos autorais 2016 Pesquisa Agropecuária Brasileira
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Direitos autorais 2016 Pesquisa Agropecuária Brasileira
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Pesquisa Agropecuaria Brasileira
Pesquisa Agropecuária Brasileira
publisher.none.fl_str_mv Pesquisa Agropecuaria Brasileira
Pesquisa Agropecuária Brasileira
dc.source.none.fl_str_mv Pesquisa Agropecuaria Brasileira; v.51, n.11, nov. 2016; 1899-1906
Pesquisa Agropecuária Brasileira; v.51, n.11, nov. 2016; 1899-1906
1678-3921
0100-104x
reponame:Pesquisa Agropecuária Brasileira (Online)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Pesquisa Agropecuária Brasileira (Online)
collection Pesquisa Agropecuária Brasileira (Online)
repository.name.fl_str_mv Pesquisa Agropecuária Brasileira (Online) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv pab@sct.embrapa.br || sct.pab@embrapa.br
_version_ 1793416678601654272