The role of alternative splicing coupled to nonsense-mediated mRNA decay in human disease

Detalhes bibliográficos
Autor(a) principal: da Costa, Paulo
Data de Publicação: 2017
Outros Autores: Menezes, Juliane, Romão, Luísa
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10400.18/5111
Resumo: Alternative pre-mRNA splicing (AS) affects gene expression as it generates proteome diversity. Nonsense-mediated mRNA decay (NMD) is a surveillance pathway that recognizes and selectively degrades mRNAs carrying premature translation-termination codons (PTCs), preventing the production of truncated proteins that could result in disease. Several studies have also implicated NMD in the regulation of steady-state levels of physiological mRNAs. In addition, it is known that several regulated AS events do not lead to generation of protein products, as they lead to transcripts that carry PTCs and thus, they are committed to NMD. Indeed, an estimated one-third of naturally occurring, alternatively spliced mRNAs is targeted for NMD, being AS coupled to NMD (AS-NMD) an efficient strategy to regulate gene expression. In this review, we will focus on how AS mechanism operates and how can be coupled to NMD to fine-tune gene expression levels. Furthermore, we will demonstrate the physiological significance of the interplay among AS and NMD in human disease, such as cancer and neurological disorders. The understanding of how AS-NMD orchestrates expression of vital genes is of utmost importance for the advance in diagnosis, prognosis and treatment of many human disorders.
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spelling The role of alternative splicing coupled to nonsense-mediated mRNA decay in human diseaseAS Coupled to NMD (AS-NMD)Alternative Splicing (AS)Human DiseaseNonsense-mediated mRNA Decay (NMD)Post-transcriptional cControl of Gene ExpressionGenómica Funcional e EstruturalExpressão GénicaAlternative pre-mRNA splicing (AS) affects gene expression as it generates proteome diversity. Nonsense-mediated mRNA decay (NMD) is a surveillance pathway that recognizes and selectively degrades mRNAs carrying premature translation-termination codons (PTCs), preventing the production of truncated proteins that could result in disease. Several studies have also implicated NMD in the regulation of steady-state levels of physiological mRNAs. In addition, it is known that several regulated AS events do not lead to generation of protein products, as they lead to transcripts that carry PTCs and thus, they are committed to NMD. Indeed, an estimated one-third of naturally occurring, alternatively spliced mRNAs is targeted for NMD, being AS coupled to NMD (AS-NMD) an efficient strategy to regulate gene expression. In this review, we will focus on how AS mechanism operates and how can be coupled to NMD to fine-tune gene expression levels. Furthermore, we will demonstrate the physiological significance of the interplay among AS and NMD in human disease, such as cancer and neurological disorders. The understanding of how AS-NMD orchestrates expression of vital genes is of utmost importance for the advance in diagnosis, prognosis and treatment of many human disorders.This work was partially supported by Fundação para a Ciência e a Tecnologia (PTFC/BIM-MEC/3749/2014 to LR and UID/MULTI/04046/2013 to BioISI from FCT/MCTES/PIDDAC. Paulo Costa and Juliane Menezes were supported by fellowships from Fundação para a Ciência e a Tecnologia (SFRH/BD/52495/2014 and SFRH/BPD/98360/2013, respectively).ElsevierRepositório Científico do Instituto Nacional de Saúdeda Costa, PauloMenezes, JulianeRomão, Luísa2021-07-23T00:30:12Z2017-102017-10-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10400.18/5111engInt J Biochem Cell Biol. 2017 Oct;91(Pt B):168-175. doi: 10.1016/j.biocel.2017.07.013. Epub 2017 Jul 221357-272510.1016/j.biocel.2017.07.013info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-20T15:40:40ZPortal AgregadorONG
dc.title.none.fl_str_mv The role of alternative splicing coupled to nonsense-mediated mRNA decay in human disease
title The role of alternative splicing coupled to nonsense-mediated mRNA decay in human disease
spellingShingle The role of alternative splicing coupled to nonsense-mediated mRNA decay in human disease
da Costa, Paulo
AS Coupled to NMD (AS-NMD)
Alternative Splicing (AS)
Human Disease
Nonsense-mediated mRNA Decay (NMD)
Post-transcriptional cControl of Gene Expression
Genómica Funcional e Estrutural
Expressão Génica
title_short The role of alternative splicing coupled to nonsense-mediated mRNA decay in human disease
title_full The role of alternative splicing coupled to nonsense-mediated mRNA decay in human disease
title_fullStr The role of alternative splicing coupled to nonsense-mediated mRNA decay in human disease
title_full_unstemmed The role of alternative splicing coupled to nonsense-mediated mRNA decay in human disease
title_sort The role of alternative splicing coupled to nonsense-mediated mRNA decay in human disease
author da Costa, Paulo
author_facet da Costa, Paulo
Menezes, Juliane
Romão, Luísa
author_role author
author2 Menezes, Juliane
Romão, Luísa
author2_role author
author
dc.contributor.none.fl_str_mv Repositório Científico do Instituto Nacional de Saúde
dc.contributor.author.fl_str_mv da Costa, Paulo
Menezes, Juliane
Romão, Luísa
dc.subject.por.fl_str_mv AS Coupled to NMD (AS-NMD)
Alternative Splicing (AS)
Human Disease
Nonsense-mediated mRNA Decay (NMD)
Post-transcriptional cControl of Gene Expression
Genómica Funcional e Estrutural
Expressão Génica
topic AS Coupled to NMD (AS-NMD)
Alternative Splicing (AS)
Human Disease
Nonsense-mediated mRNA Decay (NMD)
Post-transcriptional cControl of Gene Expression
Genómica Funcional e Estrutural
Expressão Génica
description Alternative pre-mRNA splicing (AS) affects gene expression as it generates proteome diversity. Nonsense-mediated mRNA decay (NMD) is a surveillance pathway that recognizes and selectively degrades mRNAs carrying premature translation-termination codons (PTCs), preventing the production of truncated proteins that could result in disease. Several studies have also implicated NMD in the regulation of steady-state levels of physiological mRNAs. In addition, it is known that several regulated AS events do not lead to generation of protein products, as they lead to transcripts that carry PTCs and thus, they are committed to NMD. Indeed, an estimated one-third of naturally occurring, alternatively spliced mRNAs is targeted for NMD, being AS coupled to NMD (AS-NMD) an efficient strategy to regulate gene expression. In this review, we will focus on how AS mechanism operates and how can be coupled to NMD to fine-tune gene expression levels. Furthermore, we will demonstrate the physiological significance of the interplay among AS and NMD in human disease, such as cancer and neurological disorders. The understanding of how AS-NMD orchestrates expression of vital genes is of utmost importance for the advance in diagnosis, prognosis and treatment of many human disorders.
publishDate 2017
dc.date.none.fl_str_mv 2017-10
2017-10-01T00:00:00Z
2021-07-23T00:30:12Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10400.18/5111
url http://hdl.handle.net/10400.18/5111
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Int J Biochem Cell Biol. 2017 Oct;91(Pt B):168-175. doi: 10.1016/j.biocel.2017.07.013. Epub 2017 Jul 22
1357-2725
10.1016/j.biocel.2017.07.013
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Elsevier
publisher.none.fl_str_mv Elsevier
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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