PCR-based detection of Helicobacter spp. in animal facilities of a University in Rio de Janeiro, Brazil

Detalhes bibliográficos
Autor(a) principal: MATOS-RODRIGUES,GABRIEL E.
Data de Publicação: 2020
Outros Autores: MASSERON,CAROLINNE C., SILVA,FABIO J. MOREIRA DA, FRAJBLAT,MARCEL, MOREIRA,LILIAN O., MARTINS,RODRIGO A.P.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Anais da Academia Brasileira de Ciências (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0001-37652020000700801
Resumo: Abstract Pathogenic microbial detection and control in laboratory animal facilities is essential to guarantee animal welfare, data validity and reproducibility. Helicobacter spp. are known to affect mice health, what may interfere with experimental outcomes. This study aimed to screen for Helicobacter spp. in mice from animal facilities in Rio de Janeiro, Brazil using a PCR-based method. Primers designed to specifically identify Helicobacter spp. were used to amplify feces or intestine DNA extracted of mice from four different animal facilities. The expected 375 base pairs (bp) amplicon was purified, sequenced and a similarity of 95% was observed when compared to deposited sequences of H. hepaticus and H. bilis. In our screening, Helicobacter spp. was detected in ~59% of fecal and ~70% of intestine samples. Our study is the first to screen for Helicobacter spp. in mouse facilities of a Rio de Janeiro University using a low cost, rapid molecular diagnostic test. Although Helicobacter spp. screening is not mandatory according to Brazilian animal welfare regulation it is recommended by institutional animal health monitoring programs guidelines worldwide, including ARRIVE, AAALAC and FELASA.
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spelling PCR-based detection of Helicobacter spp. in animal facilities of a University in Rio de Janeiro, BrazilDiagnosticscreeninglaboratory miceHelicobacterAbstract Pathogenic microbial detection and control in laboratory animal facilities is essential to guarantee animal welfare, data validity and reproducibility. Helicobacter spp. are known to affect mice health, what may interfere with experimental outcomes. This study aimed to screen for Helicobacter spp. in mice from animal facilities in Rio de Janeiro, Brazil using a PCR-based method. Primers designed to specifically identify Helicobacter spp. were used to amplify feces or intestine DNA extracted of mice from four different animal facilities. The expected 375 base pairs (bp) amplicon was purified, sequenced and a similarity of 95% was observed when compared to deposited sequences of H. hepaticus and H. bilis. In our screening, Helicobacter spp. was detected in ~59% of fecal and ~70% of intestine samples. Our study is the first to screen for Helicobacter spp. in mouse facilities of a Rio de Janeiro University using a low cost, rapid molecular diagnostic test. Although Helicobacter spp. screening is not mandatory according to Brazilian animal welfare regulation it is recommended by institutional animal health monitoring programs guidelines worldwide, including ARRIVE, AAALAC and FELASA.Academia Brasileira de Ciências2020-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0001-37652020000700801Anais da Academia Brasileira de Ciências v.92 n.4 2020reponame:Anais da Academia Brasileira de Ciências (Online)instname:Academia Brasileira de Ciências (ABC)instacron:ABC10.1590/0001-3765202020191517info:eu-repo/semantics/openAccessMATOS-RODRIGUES,GABRIEL E.MASSERON,CAROLINNE C.SILVA,FABIO J. MOREIRA DAFRAJBLAT,MARCELMOREIRA,LILIAN O.MARTINS,RODRIGO A.P.eng2020-08-20T00:00:00Zoai:scielo:S0001-37652020000700801Revistahttp://www.scielo.br/aabchttps://old.scielo.br/oai/scielo-oai.php||aabc@abc.org.br1678-26900001-3765opendoar:2020-08-20T00:00Anais da Academia Brasileira de Ciências (Online) - Academia Brasileira de Ciências (ABC)false
dc.title.none.fl_str_mv PCR-based detection of Helicobacter spp. in animal facilities of a University in Rio de Janeiro, Brazil
title PCR-based detection of Helicobacter spp. in animal facilities of a University in Rio de Janeiro, Brazil
spellingShingle PCR-based detection of Helicobacter spp. in animal facilities of a University in Rio de Janeiro, Brazil
MATOS-RODRIGUES,GABRIEL E.
Diagnostic
screening
laboratory mice
Helicobacter
title_short PCR-based detection of Helicobacter spp. in animal facilities of a University in Rio de Janeiro, Brazil
title_full PCR-based detection of Helicobacter spp. in animal facilities of a University in Rio de Janeiro, Brazil
title_fullStr PCR-based detection of Helicobacter spp. in animal facilities of a University in Rio de Janeiro, Brazil
title_full_unstemmed PCR-based detection of Helicobacter spp. in animal facilities of a University in Rio de Janeiro, Brazil
title_sort PCR-based detection of Helicobacter spp. in animal facilities of a University in Rio de Janeiro, Brazil
author MATOS-RODRIGUES,GABRIEL E.
author_facet MATOS-RODRIGUES,GABRIEL E.
MASSERON,CAROLINNE C.
SILVA,FABIO J. MOREIRA DA
FRAJBLAT,MARCEL
MOREIRA,LILIAN O.
MARTINS,RODRIGO A.P.
author_role author
author2 MASSERON,CAROLINNE C.
SILVA,FABIO J. MOREIRA DA
FRAJBLAT,MARCEL
MOREIRA,LILIAN O.
MARTINS,RODRIGO A.P.
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv MATOS-RODRIGUES,GABRIEL E.
MASSERON,CAROLINNE C.
SILVA,FABIO J. MOREIRA DA
FRAJBLAT,MARCEL
MOREIRA,LILIAN O.
MARTINS,RODRIGO A.P.
dc.subject.por.fl_str_mv Diagnostic
screening
laboratory mice
Helicobacter
topic Diagnostic
screening
laboratory mice
Helicobacter
description Abstract Pathogenic microbial detection and control in laboratory animal facilities is essential to guarantee animal welfare, data validity and reproducibility. Helicobacter spp. are known to affect mice health, what may interfere with experimental outcomes. This study aimed to screen for Helicobacter spp. in mice from animal facilities in Rio de Janeiro, Brazil using a PCR-based method. Primers designed to specifically identify Helicobacter spp. were used to amplify feces or intestine DNA extracted of mice from four different animal facilities. The expected 375 base pairs (bp) amplicon was purified, sequenced and a similarity of 95% was observed when compared to deposited sequences of H. hepaticus and H. bilis. In our screening, Helicobacter spp. was detected in ~59% of fecal and ~70% of intestine samples. Our study is the first to screen for Helicobacter spp. in mouse facilities of a Rio de Janeiro University using a low cost, rapid molecular diagnostic test. Although Helicobacter spp. screening is not mandatory according to Brazilian animal welfare regulation it is recommended by institutional animal health monitoring programs guidelines worldwide, including ARRIVE, AAALAC and FELASA.
publishDate 2020
dc.date.none.fl_str_mv 2020-01-01
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dc.language.iso.fl_str_mv eng
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dc.relation.none.fl_str_mv 10.1590/0001-3765202020191517
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dc.publisher.none.fl_str_mv Academia Brasileira de Ciências
publisher.none.fl_str_mv Academia Brasileira de Ciências
dc.source.none.fl_str_mv Anais da Academia Brasileira de Ciências v.92 n.4 2020
reponame:Anais da Academia Brasileira de Ciências (Online)
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