PCR-based detection of Helicobacter spp. in animal facilities of a University in Rio de Janeiro, Brazil
Autor(a) principal: | |
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Data de Publicação: | 2020 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Anais da Academia Brasileira de Ciências (Online) |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0001-37652020000700801 |
Resumo: | Abstract Pathogenic microbial detection and control in laboratory animal facilities is essential to guarantee animal welfare, data validity and reproducibility. Helicobacter spp. are known to affect mice health, what may interfere with experimental outcomes. This study aimed to screen for Helicobacter spp. in mice from animal facilities in Rio de Janeiro, Brazil using a PCR-based method. Primers designed to specifically identify Helicobacter spp. were used to amplify feces or intestine DNA extracted of mice from four different animal facilities. The expected 375 base pairs (bp) amplicon was purified, sequenced and a similarity of 95% was observed when compared to deposited sequences of H. hepaticus and H. bilis. In our screening, Helicobacter spp. was detected in ~59% of fecal and ~70% of intestine samples. Our study is the first to screen for Helicobacter spp. in mouse facilities of a Rio de Janeiro University using a low cost, rapid molecular diagnostic test. Although Helicobacter spp. screening is not mandatory according to Brazilian animal welfare regulation it is recommended by institutional animal health monitoring programs guidelines worldwide, including ARRIVE, AAALAC and FELASA. |
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PCR-based detection of Helicobacter spp. in animal facilities of a University in Rio de Janeiro, BrazilDiagnosticscreeninglaboratory miceHelicobacterAbstract Pathogenic microbial detection and control in laboratory animal facilities is essential to guarantee animal welfare, data validity and reproducibility. Helicobacter spp. are known to affect mice health, what may interfere with experimental outcomes. This study aimed to screen for Helicobacter spp. in mice from animal facilities in Rio de Janeiro, Brazil using a PCR-based method. Primers designed to specifically identify Helicobacter spp. were used to amplify feces or intestine DNA extracted of mice from four different animal facilities. The expected 375 base pairs (bp) amplicon was purified, sequenced and a similarity of 95% was observed when compared to deposited sequences of H. hepaticus and H. bilis. In our screening, Helicobacter spp. was detected in ~59% of fecal and ~70% of intestine samples. Our study is the first to screen for Helicobacter spp. in mouse facilities of a Rio de Janeiro University using a low cost, rapid molecular diagnostic test. Although Helicobacter spp. screening is not mandatory according to Brazilian animal welfare regulation it is recommended by institutional animal health monitoring programs guidelines worldwide, including ARRIVE, AAALAC and FELASA.Academia Brasileira de Ciências2020-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0001-37652020000700801Anais da Academia Brasileira de Ciências v.92 n.4 2020reponame:Anais da Academia Brasileira de Ciências (Online)instname:Academia Brasileira de Ciências (ABC)instacron:ABC10.1590/0001-3765202020191517info:eu-repo/semantics/openAccessMATOS-RODRIGUES,GABRIEL E.MASSERON,CAROLINNE C.SILVA,FABIO J. MOREIRA DAFRAJBLAT,MARCELMOREIRA,LILIAN O.MARTINS,RODRIGO A.P.eng2020-08-20T00:00:00Zoai:scielo:S0001-37652020000700801Revistahttp://www.scielo.br/aabchttps://old.scielo.br/oai/scielo-oai.php||aabc@abc.org.br1678-26900001-3765opendoar:2020-08-20T00:00Anais da Academia Brasileira de Ciências (Online) - Academia Brasileira de Ciências (ABC)false |
dc.title.none.fl_str_mv |
PCR-based detection of Helicobacter spp. in animal facilities of a University in Rio de Janeiro, Brazil |
title |
PCR-based detection of Helicobacter spp. in animal facilities of a University in Rio de Janeiro, Brazil |
spellingShingle |
PCR-based detection of Helicobacter spp. in animal facilities of a University in Rio de Janeiro, Brazil MATOS-RODRIGUES,GABRIEL E. Diagnostic screening laboratory mice Helicobacter |
title_short |
PCR-based detection of Helicobacter spp. in animal facilities of a University in Rio de Janeiro, Brazil |
title_full |
PCR-based detection of Helicobacter spp. in animal facilities of a University in Rio de Janeiro, Brazil |
title_fullStr |
PCR-based detection of Helicobacter spp. in animal facilities of a University in Rio de Janeiro, Brazil |
title_full_unstemmed |
PCR-based detection of Helicobacter spp. in animal facilities of a University in Rio de Janeiro, Brazil |
title_sort |
PCR-based detection of Helicobacter spp. in animal facilities of a University in Rio de Janeiro, Brazil |
author |
MATOS-RODRIGUES,GABRIEL E. |
author_facet |
MATOS-RODRIGUES,GABRIEL E. MASSERON,CAROLINNE C. SILVA,FABIO J. MOREIRA DA FRAJBLAT,MARCEL MOREIRA,LILIAN O. MARTINS,RODRIGO A.P. |
author_role |
author |
author2 |
MASSERON,CAROLINNE C. SILVA,FABIO J. MOREIRA DA FRAJBLAT,MARCEL MOREIRA,LILIAN O. MARTINS,RODRIGO A.P. |
author2_role |
author author author author author |
dc.contributor.author.fl_str_mv |
MATOS-RODRIGUES,GABRIEL E. MASSERON,CAROLINNE C. SILVA,FABIO J. MOREIRA DA FRAJBLAT,MARCEL MOREIRA,LILIAN O. MARTINS,RODRIGO A.P. |
dc.subject.por.fl_str_mv |
Diagnostic screening laboratory mice Helicobacter |
topic |
Diagnostic screening laboratory mice Helicobacter |
description |
Abstract Pathogenic microbial detection and control in laboratory animal facilities is essential to guarantee animal welfare, data validity and reproducibility. Helicobacter spp. are known to affect mice health, what may interfere with experimental outcomes. This study aimed to screen for Helicobacter spp. in mice from animal facilities in Rio de Janeiro, Brazil using a PCR-based method. Primers designed to specifically identify Helicobacter spp. were used to amplify feces or intestine DNA extracted of mice from four different animal facilities. The expected 375 base pairs (bp) amplicon was purified, sequenced and a similarity of 95% was observed when compared to deposited sequences of H. hepaticus and H. bilis. In our screening, Helicobacter spp. was detected in ~59% of fecal and ~70% of intestine samples. Our study is the first to screen for Helicobacter spp. in mouse facilities of a Rio de Janeiro University using a low cost, rapid molecular diagnostic test. Although Helicobacter spp. screening is not mandatory according to Brazilian animal welfare regulation it is recommended by institutional animal health monitoring programs guidelines worldwide, including ARRIVE, AAALAC and FELASA. |
publishDate |
2020 |
dc.date.none.fl_str_mv |
2020-01-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0001-37652020000700801 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0001-37652020000700801 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.1590/0001-3765202020191517 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Academia Brasileira de Ciências |
publisher.none.fl_str_mv |
Academia Brasileira de Ciências |
dc.source.none.fl_str_mv |
Anais da Academia Brasileira de Ciências v.92 n.4 2020 reponame:Anais da Academia Brasileira de Ciências (Online) instname:Academia Brasileira de Ciências (ABC) instacron:ABC |
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Academia Brasileira de Ciências (ABC) |
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ABC |
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ABC |
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Anais da Academia Brasileira de Ciências (Online) |
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Anais da Academia Brasileira de Ciências (Online) |
repository.name.fl_str_mv |
Anais da Academia Brasileira de Ciências (Online) - Academia Brasileira de Ciências (ABC) |
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||aabc@abc.org.br |
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1754302869366898688 |