Genetic diversity assessed by microsatellite markers in the amphicarpic species Trifolium polymorphum Poir.

Detalhes bibliográficos
Autor(a) principal: CONTERATO,IONARA F.
Data de Publicação: 2018
Outros Autores: SCHIFINO-WITTMANN,MARIA TERESA, GUERRA,DIVANILDE, BÜTTOW,MIRIAM V., AGNOL,MIGUEL DALL’, DAHMER,NAIR
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Anais da Academia Brasileira de Ciências (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0001-37652018000401685
Resumo: ABSTRACT Trifolium polymorphum Poir. is an amphicarpic forage legume from southern Brazil, Uruguay, Argentina, Paraguay and Chile. Information on the genetic diversity of natural populations in natural grasslands in southern Brazil is limited. In order to increase the knowledge about this species, an analysis of the genetic diversity was carried out in 10 natural populations of T. polymorphum with the use of 20 microsatellite markers. The expected heterozygosity in T. polymorphum populations ranged from 0.40 to 0.43, with a mean of 0.42. A total of 193 alleles were detected with a mean of 9.3 alleles per locus and polymorphic information content (PIC) for these markers of 0.62 to 0.89 with a mean of 0.84.The grouping based on the Jaccard’s coefficient of similarity classified populations, regardless of their regions of origin, into two groups with a mean similarity coefficient of 0.32, reflecting the high genetic variability of the populations, especially those located in the Campanha phytogeographic region. This information on diversity can be used to plan future germplasm collection strategies for conservation purposes and also for the breeding of the species.
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spelling Genetic diversity assessed by microsatellite markers in the amphicarpic species Trifolium polymorphum Poir.genetic variabilitymicrosatellitesnatural grasslandsPampa biomeABSTRACT Trifolium polymorphum Poir. is an amphicarpic forage legume from southern Brazil, Uruguay, Argentina, Paraguay and Chile. Information on the genetic diversity of natural populations in natural grasslands in southern Brazil is limited. In order to increase the knowledge about this species, an analysis of the genetic diversity was carried out in 10 natural populations of T. polymorphum with the use of 20 microsatellite markers. The expected heterozygosity in T. polymorphum populations ranged from 0.40 to 0.43, with a mean of 0.42. A total of 193 alleles were detected with a mean of 9.3 alleles per locus and polymorphic information content (PIC) for these markers of 0.62 to 0.89 with a mean of 0.84.The grouping based on the Jaccard’s coefficient of similarity classified populations, regardless of their regions of origin, into two groups with a mean similarity coefficient of 0.32, reflecting the high genetic variability of the populations, especially those located in the Campanha phytogeographic region. This information on diversity can be used to plan future germplasm collection strategies for conservation purposes and also for the breeding of the species.Academia Brasileira de Ciências2018-04-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0001-37652018000401685Anais da Academia Brasileira de Ciências v.90 n.2 2018reponame:Anais da Academia Brasileira de Ciências (Online)instname:Academia Brasileira de Ciências (ABC)instacron:ABC10.1590/0001-3765201820170784info:eu-repo/semantics/openAccessCONTERATO,IONARA F.SCHIFINO-WITTMANN,MARIA TERESAGUERRA,DIVANILDEBÜTTOW,MIRIAM V.AGNOL,MIGUEL DALL’DAHMER,NAIReng2018-06-08T00:00:00Zoai:scielo:S0001-37652018000401685Revistahttp://www.scielo.br/aabchttps://old.scielo.br/oai/scielo-oai.php||aabc@abc.org.br1678-26900001-3765opendoar:2018-06-08T00:00Anais da Academia Brasileira de Ciências (Online) - Academia Brasileira de Ciências (ABC)false
dc.title.none.fl_str_mv Genetic diversity assessed by microsatellite markers in the amphicarpic species Trifolium polymorphum Poir.
title Genetic diversity assessed by microsatellite markers in the amphicarpic species Trifolium polymorphum Poir.
spellingShingle Genetic diversity assessed by microsatellite markers in the amphicarpic species Trifolium polymorphum Poir.
CONTERATO,IONARA F.
genetic variability
microsatellites
natural grasslands
Pampa biome
title_short Genetic diversity assessed by microsatellite markers in the amphicarpic species Trifolium polymorphum Poir.
title_full Genetic diversity assessed by microsatellite markers in the amphicarpic species Trifolium polymorphum Poir.
title_fullStr Genetic diversity assessed by microsatellite markers in the amphicarpic species Trifolium polymorphum Poir.
title_full_unstemmed Genetic diversity assessed by microsatellite markers in the amphicarpic species Trifolium polymorphum Poir.
title_sort Genetic diversity assessed by microsatellite markers in the amphicarpic species Trifolium polymorphum Poir.
author CONTERATO,IONARA F.
author_facet CONTERATO,IONARA F.
SCHIFINO-WITTMANN,MARIA TERESA
GUERRA,DIVANILDE
BÜTTOW,MIRIAM V.
AGNOL,MIGUEL DALL’
DAHMER,NAIR
author_role author
author2 SCHIFINO-WITTMANN,MARIA TERESA
GUERRA,DIVANILDE
BÜTTOW,MIRIAM V.
AGNOL,MIGUEL DALL’
DAHMER,NAIR
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv CONTERATO,IONARA F.
SCHIFINO-WITTMANN,MARIA TERESA
GUERRA,DIVANILDE
BÜTTOW,MIRIAM V.
AGNOL,MIGUEL DALL’
DAHMER,NAIR
dc.subject.por.fl_str_mv genetic variability
microsatellites
natural grasslands
Pampa biome
topic genetic variability
microsatellites
natural grasslands
Pampa biome
description ABSTRACT Trifolium polymorphum Poir. is an amphicarpic forage legume from southern Brazil, Uruguay, Argentina, Paraguay and Chile. Information on the genetic diversity of natural populations in natural grasslands in southern Brazil is limited. In order to increase the knowledge about this species, an analysis of the genetic diversity was carried out in 10 natural populations of T. polymorphum with the use of 20 microsatellite markers. The expected heterozygosity in T. polymorphum populations ranged from 0.40 to 0.43, with a mean of 0.42. A total of 193 alleles were detected with a mean of 9.3 alleles per locus and polymorphic information content (PIC) for these markers of 0.62 to 0.89 with a mean of 0.84.The grouping based on the Jaccard’s coefficient of similarity classified populations, regardless of their regions of origin, into two groups with a mean similarity coefficient of 0.32, reflecting the high genetic variability of the populations, especially those located in the Campanha phytogeographic region. This information on diversity can be used to plan future germplasm collection strategies for conservation purposes and also for the breeding of the species.
publishDate 2018
dc.date.none.fl_str_mv 2018-04-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0001-37652018000401685
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dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/0001-3765201820170784
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.publisher.none.fl_str_mv Academia Brasileira de Ciências
publisher.none.fl_str_mv Academia Brasileira de Ciências
dc.source.none.fl_str_mv Anais da Academia Brasileira de Ciências v.90 n.2 2018
reponame:Anais da Academia Brasileira de Ciências (Online)
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