Conventional PCR for detection of Corynespora cassiicola in soybean seeds

Detalhes bibliográficos
Autor(a) principal: Sousa,Marcella Viana de
Data de Publicação: 2016
Outros Autores: Siqueira,Carolina da Silva, Machado,José da Cruz
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Journal of Seed Science
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S2317-15372016000200085
Resumo: Abstract The fungus Corynespora cassiicola, causal agent of target spot in soybeans, can be transmitted by soybean seeds and as of that point cause severe damage. This disease may be diagnosed at an early stage by seed testing, but knowledge in this area is insufficient. Because of that and increased attack by the disease in soybean areas in Brazil, further studies are required. The aim of this study was to evaluate the use of conventional PCR in detecting C. cassiicola in soybean seeds. The GA4-F/GA4-R primers described in the literature were tested for their specificity and sensitivity for detection of C. cassiicola in pure culture and in soybean seeds. Uninoculated and inoculated seed samples were used with different incidence levels - 100%, 10%, 1%, 0.5%, 0.25%, and 0% of preestablished inoculum potentials, P0, P1, P2, and P3. Detection of C. cassiicola in P1 inoculum potential was observed in samples with incidence levels of 10% to 100%. In the P3 potential, detection of the pathogen was successful in samples at the low level of 0.25%.
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spelling Conventional PCR for detection of Corynespora cassiicola in soybean seedsseed pathologytarget spotelectrophoresisAbstract The fungus Corynespora cassiicola, causal agent of target spot in soybeans, can be transmitted by soybean seeds and as of that point cause severe damage. This disease may be diagnosed at an early stage by seed testing, but knowledge in this area is insufficient. Because of that and increased attack by the disease in soybean areas in Brazil, further studies are required. The aim of this study was to evaluate the use of conventional PCR in detecting C. cassiicola in soybean seeds. The GA4-F/GA4-R primers described in the literature were tested for their specificity and sensitivity for detection of C. cassiicola in pure culture and in soybean seeds. Uninoculated and inoculated seed samples were used with different incidence levels - 100%, 10%, 1%, 0.5%, 0.25%, and 0% of preestablished inoculum potentials, P0, P1, P2, and P3. Detection of C. cassiicola in P1 inoculum potential was observed in samples with incidence levels of 10% to 100%. In the P3 potential, detection of the pathogen was successful in samples at the low level of 0.25%.ABRATES - Associação Brasileira de Tecnologia de Sementes2016-06-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S2317-15372016000200085Journal of Seed Science v.38 n.2 2016reponame:Journal of Seed Scienceinstname:Associação Brasileira de Tecnologia de Sementes (ABRATES)instacron:ABRATES10.1590/2317-1545v38n2152049info:eu-repo/semantics/openAccessSousa,Marcella Viana deSiqueira,Carolina da SilvaMachado,José da Cruzeng2016-10-04T00:00:00Zoai:scielo:S2317-15372016000200085Revistahttp://www.scielo.br/scielo.php?script=sci_serial&pid=2317-1537&lng=en&nrm=isohttps://old.scielo.br/oai/scielo-oai.php||abrates@abrates.org.br2317-15452317-1537opendoar:2016-10-04T00:00Journal of Seed Science - Associação Brasileira de Tecnologia de Sementes (ABRATES)false
dc.title.none.fl_str_mv Conventional PCR for detection of Corynespora cassiicola in soybean seeds
title Conventional PCR for detection of Corynespora cassiicola in soybean seeds
spellingShingle Conventional PCR for detection of Corynespora cassiicola in soybean seeds
Sousa,Marcella Viana de
seed pathology
target spot
electrophoresis
title_short Conventional PCR for detection of Corynespora cassiicola in soybean seeds
title_full Conventional PCR for detection of Corynespora cassiicola in soybean seeds
title_fullStr Conventional PCR for detection of Corynespora cassiicola in soybean seeds
title_full_unstemmed Conventional PCR for detection of Corynespora cassiicola in soybean seeds
title_sort Conventional PCR for detection of Corynespora cassiicola in soybean seeds
author Sousa,Marcella Viana de
author_facet Sousa,Marcella Viana de
Siqueira,Carolina da Silva
Machado,José da Cruz
author_role author
author2 Siqueira,Carolina da Silva
Machado,José da Cruz
author2_role author
author
dc.contributor.author.fl_str_mv Sousa,Marcella Viana de
Siqueira,Carolina da Silva
Machado,José da Cruz
dc.subject.por.fl_str_mv seed pathology
target spot
electrophoresis
topic seed pathology
target spot
electrophoresis
description Abstract The fungus Corynespora cassiicola, causal agent of target spot in soybeans, can be transmitted by soybean seeds and as of that point cause severe damage. This disease may be diagnosed at an early stage by seed testing, but knowledge in this area is insufficient. Because of that and increased attack by the disease in soybean areas in Brazil, further studies are required. The aim of this study was to evaluate the use of conventional PCR in detecting C. cassiicola in soybean seeds. The GA4-F/GA4-R primers described in the literature were tested for their specificity and sensitivity for detection of C. cassiicola in pure culture and in soybean seeds. Uninoculated and inoculated seed samples were used with different incidence levels - 100%, 10%, 1%, 0.5%, 0.25%, and 0% of preestablished inoculum potentials, P0, P1, P2, and P3. Detection of C. cassiicola in P1 inoculum potential was observed in samples with incidence levels of 10% to 100%. In the P3 potential, detection of the pathogen was successful in samples at the low level of 0.25%.
publishDate 2016
dc.date.none.fl_str_mv 2016-06-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S2317-15372016000200085
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S2317-15372016000200085
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/2317-1545v38n2152049
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv ABRATES - Associação Brasileira de Tecnologia de Sementes
publisher.none.fl_str_mv ABRATES - Associação Brasileira de Tecnologia de Sementes
dc.source.none.fl_str_mv Journal of Seed Science v.38 n.2 2016
reponame:Journal of Seed Science
instname:Associação Brasileira de Tecnologia de Sementes (ABRATES)
instacron:ABRATES
instname_str Associação Brasileira de Tecnologia de Sementes (ABRATES)
instacron_str ABRATES
institution ABRATES
reponame_str Journal of Seed Science
collection Journal of Seed Science
repository.name.fl_str_mv Journal of Seed Science - Associação Brasileira de Tecnologia de Sementes (ABRATES)
repository.mail.fl_str_mv ||abrates@abrates.org.br
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