Comparison of PCR-based molecular markers for the characterization of Proteus mirabilis clinical isolates

Detalhes bibliográficos
Autor(a) principal: Michelim,Lessandra
Data de Publicação: 2008
Outros Autores: Muller,Gabriela, Zacaria,Jucimar, Delamare,Ana Paula Longaray, Costa,Sérgio Olavo Pinto da, Echeverrigaray,Sergio
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Brazilian Journal of Infectious Diseases
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1413-86702008000500014
Resumo: Proteus mirabilis is one of the most important pathogens associated with complicated urinary tract infections (acute pyelonephritis, bladder infections, kidney stones) and bacteremia, affecting patients with anatomical abnormalities, immunodeficiency, and long-term urinary catheterization. For epidemiological purposes, various molecular typing methods, such as pulse-field gel electrophoresis (PFGE) or ribotyping, have been developed for this pathogen. However, these methods are labor intensive and time-consuming. We evaluated the discriminatory power of several PCR-based fingerprinting methods (RAPD, ISSR, ERIC-PCR, BOX-PCR and rep-PCR) for P. mirabilis clinical isolates. Typing patterns and clustering analysis indicated that RAPD, BOX-PCR and ERIC-PCR differentiated P. mirabilis strains from Escherichia coli, Hafnia alvei, and Morganella morganii. With the exception of rep-PCR, the methods gave medium to high discriminatory efficiency in P. mirabilis. In general, the results obtained with RAPD, BOX-PCR and ERIC-PCR were in good agreement. We concluded that a combination of ERIC-PCR and BOX-PCR results is a rapid and reliable alternative for discrimination among P. mirabilis clinical isolates, contributing to epidemiological studies.
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spelling Comparison of PCR-based molecular markers for the characterization of Proteus mirabilis clinical isolatesProteus mirabilismolecular markersfingerprintingPCRProteus mirabilis is one of the most important pathogens associated with complicated urinary tract infections (acute pyelonephritis, bladder infections, kidney stones) and bacteremia, affecting patients with anatomical abnormalities, immunodeficiency, and long-term urinary catheterization. For epidemiological purposes, various molecular typing methods, such as pulse-field gel electrophoresis (PFGE) or ribotyping, have been developed for this pathogen. However, these methods are labor intensive and time-consuming. We evaluated the discriminatory power of several PCR-based fingerprinting methods (RAPD, ISSR, ERIC-PCR, BOX-PCR and rep-PCR) for P. mirabilis clinical isolates. Typing patterns and clustering analysis indicated that RAPD, BOX-PCR and ERIC-PCR differentiated P. mirabilis strains from Escherichia coli, Hafnia alvei, and Morganella morganii. With the exception of rep-PCR, the methods gave medium to high discriminatory efficiency in P. mirabilis. In general, the results obtained with RAPD, BOX-PCR and ERIC-PCR were in good agreement. We concluded that a combination of ERIC-PCR and BOX-PCR results is a rapid and reliable alternative for discrimination among P. mirabilis clinical isolates, contributing to epidemiological studies.Brazilian Society of Infectious Diseases2008-10-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1413-86702008000500014Brazilian Journal of Infectious Diseases v.12 n.5 2008reponame:Brazilian Journal of Infectious Diseasesinstname:Brazilian Society of Infectious Diseases (BSID)instacron:BSID10.1590/S1413-86702008000500014info:eu-repo/semantics/openAccessMichelim,LessandraMuller,GabrielaZacaria,JucimarDelamare,Ana Paula LongarayCosta,Sérgio Olavo Pinto daEcheverrigaray,Sergioeng2009-02-09T00:00:00Zoai:scielo:S1413-86702008000500014Revistahttps://www.bjid.org.br/https://old.scielo.br/oai/scielo-oai.phpbjid@bjid.org.br||lgoldani@ufrgs.br1678-43911413-8670opendoar:2009-02-09T00:00Brazilian Journal of Infectious Diseases - Brazilian Society of Infectious Diseases (BSID)false
dc.title.none.fl_str_mv Comparison of PCR-based molecular markers for the characterization of Proteus mirabilis clinical isolates
title Comparison of PCR-based molecular markers for the characterization of Proteus mirabilis clinical isolates
spellingShingle Comparison of PCR-based molecular markers for the characterization of Proteus mirabilis clinical isolates
Michelim,Lessandra
Proteus mirabilis
molecular markers
fingerprinting
PCR
title_short Comparison of PCR-based molecular markers for the characterization of Proteus mirabilis clinical isolates
title_full Comparison of PCR-based molecular markers for the characterization of Proteus mirabilis clinical isolates
title_fullStr Comparison of PCR-based molecular markers for the characterization of Proteus mirabilis clinical isolates
title_full_unstemmed Comparison of PCR-based molecular markers for the characterization of Proteus mirabilis clinical isolates
title_sort Comparison of PCR-based molecular markers for the characterization of Proteus mirabilis clinical isolates
author Michelim,Lessandra
author_facet Michelim,Lessandra
Muller,Gabriela
Zacaria,Jucimar
Delamare,Ana Paula Longaray
Costa,Sérgio Olavo Pinto da
Echeverrigaray,Sergio
author_role author
author2 Muller,Gabriela
Zacaria,Jucimar
Delamare,Ana Paula Longaray
Costa,Sérgio Olavo Pinto da
Echeverrigaray,Sergio
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Michelim,Lessandra
Muller,Gabriela
Zacaria,Jucimar
Delamare,Ana Paula Longaray
Costa,Sérgio Olavo Pinto da
Echeverrigaray,Sergio
dc.subject.por.fl_str_mv Proteus mirabilis
molecular markers
fingerprinting
PCR
topic Proteus mirabilis
molecular markers
fingerprinting
PCR
description Proteus mirabilis is one of the most important pathogens associated with complicated urinary tract infections (acute pyelonephritis, bladder infections, kidney stones) and bacteremia, affecting patients with anatomical abnormalities, immunodeficiency, and long-term urinary catheterization. For epidemiological purposes, various molecular typing methods, such as pulse-field gel electrophoresis (PFGE) or ribotyping, have been developed for this pathogen. However, these methods are labor intensive and time-consuming. We evaluated the discriminatory power of several PCR-based fingerprinting methods (RAPD, ISSR, ERIC-PCR, BOX-PCR and rep-PCR) for P. mirabilis clinical isolates. Typing patterns and clustering analysis indicated that RAPD, BOX-PCR and ERIC-PCR differentiated P. mirabilis strains from Escherichia coli, Hafnia alvei, and Morganella morganii. With the exception of rep-PCR, the methods gave medium to high discriminatory efficiency in P. mirabilis. In general, the results obtained with RAPD, BOX-PCR and ERIC-PCR were in good agreement. We concluded that a combination of ERIC-PCR and BOX-PCR results is a rapid and reliable alternative for discrimination among P. mirabilis clinical isolates, contributing to epidemiological studies.
publishDate 2008
dc.date.none.fl_str_mv 2008-10-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1413-86702008000500014
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1413-86702008000500014
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S1413-86702008000500014
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Brazilian Society of Infectious Diseases
publisher.none.fl_str_mv Brazilian Society of Infectious Diseases
dc.source.none.fl_str_mv Brazilian Journal of Infectious Diseases v.12 n.5 2008
reponame:Brazilian Journal of Infectious Diseases
instname:Brazilian Society of Infectious Diseases (BSID)
instacron:BSID
instname_str Brazilian Society of Infectious Diseases (BSID)
instacron_str BSID
institution BSID
reponame_str Brazilian Journal of Infectious Diseases
collection Brazilian Journal of Infectious Diseases
repository.name.fl_str_mv Brazilian Journal of Infectious Diseases - Brazilian Society of Infectious Diseases (BSID)
repository.mail.fl_str_mv bjid@bjid.org.br||lgoldani@ufrgs.br
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