Comparison of PCR-based molecular markers for the characterization of Proteus mirabilis clinical isolates
Autor(a) principal: | |
---|---|
Data de Publicação: | 2008 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Brazilian Journal of Infectious Diseases |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1413-86702008000500014 |
Resumo: | Proteus mirabilis is one of the most important pathogens associated with complicated urinary tract infections (acute pyelonephritis, bladder infections, kidney stones) and bacteremia, affecting patients with anatomical abnormalities, immunodeficiency, and long-term urinary catheterization. For epidemiological purposes, various molecular typing methods, such as pulse-field gel electrophoresis (PFGE) or ribotyping, have been developed for this pathogen. However, these methods are labor intensive and time-consuming. We evaluated the discriminatory power of several PCR-based fingerprinting methods (RAPD, ISSR, ERIC-PCR, BOX-PCR and rep-PCR) for P. mirabilis clinical isolates. Typing patterns and clustering analysis indicated that RAPD, BOX-PCR and ERIC-PCR differentiated P. mirabilis strains from Escherichia coli, Hafnia alvei, and Morganella morganii. With the exception of rep-PCR, the methods gave medium to high discriminatory efficiency in P. mirabilis. In general, the results obtained with RAPD, BOX-PCR and ERIC-PCR were in good agreement. We concluded that a combination of ERIC-PCR and BOX-PCR results is a rapid and reliable alternative for discrimination among P. mirabilis clinical isolates, contributing to epidemiological studies. |
id |
BSID-1_d84fdd92ac109c767ad2c634efe64691 |
---|---|
oai_identifier_str |
oai:scielo:S1413-86702008000500014 |
network_acronym_str |
BSID-1 |
network_name_str |
Brazilian Journal of Infectious Diseases |
repository_id_str |
|
spelling |
Comparison of PCR-based molecular markers for the characterization of Proteus mirabilis clinical isolatesProteus mirabilismolecular markersfingerprintingPCRProteus mirabilis is one of the most important pathogens associated with complicated urinary tract infections (acute pyelonephritis, bladder infections, kidney stones) and bacteremia, affecting patients with anatomical abnormalities, immunodeficiency, and long-term urinary catheterization. For epidemiological purposes, various molecular typing methods, such as pulse-field gel electrophoresis (PFGE) or ribotyping, have been developed for this pathogen. However, these methods are labor intensive and time-consuming. We evaluated the discriminatory power of several PCR-based fingerprinting methods (RAPD, ISSR, ERIC-PCR, BOX-PCR and rep-PCR) for P. mirabilis clinical isolates. Typing patterns and clustering analysis indicated that RAPD, BOX-PCR and ERIC-PCR differentiated P. mirabilis strains from Escherichia coli, Hafnia alvei, and Morganella morganii. With the exception of rep-PCR, the methods gave medium to high discriminatory efficiency in P. mirabilis. In general, the results obtained with RAPD, BOX-PCR and ERIC-PCR were in good agreement. We concluded that a combination of ERIC-PCR and BOX-PCR results is a rapid and reliable alternative for discrimination among P. mirabilis clinical isolates, contributing to epidemiological studies.Brazilian Society of Infectious Diseases2008-10-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1413-86702008000500014Brazilian Journal of Infectious Diseases v.12 n.5 2008reponame:Brazilian Journal of Infectious Diseasesinstname:Brazilian Society of Infectious Diseases (BSID)instacron:BSID10.1590/S1413-86702008000500014info:eu-repo/semantics/openAccessMichelim,LessandraMuller,GabrielaZacaria,JucimarDelamare,Ana Paula LongarayCosta,Sérgio Olavo Pinto daEcheverrigaray,Sergioeng2009-02-09T00:00:00Zoai:scielo:S1413-86702008000500014Revistahttps://www.bjid.org.br/https://old.scielo.br/oai/scielo-oai.phpbjid@bjid.org.br||lgoldani@ufrgs.br1678-43911413-8670opendoar:2009-02-09T00:00Brazilian Journal of Infectious Diseases - Brazilian Society of Infectious Diseases (BSID)false |
dc.title.none.fl_str_mv |
Comparison of PCR-based molecular markers for the characterization of Proteus mirabilis clinical isolates |
title |
Comparison of PCR-based molecular markers for the characterization of Proteus mirabilis clinical isolates |
spellingShingle |
Comparison of PCR-based molecular markers for the characterization of Proteus mirabilis clinical isolates Michelim,Lessandra Proteus mirabilis molecular markers fingerprinting PCR |
title_short |
Comparison of PCR-based molecular markers for the characterization of Proteus mirabilis clinical isolates |
title_full |
Comparison of PCR-based molecular markers for the characterization of Proteus mirabilis clinical isolates |
title_fullStr |
Comparison of PCR-based molecular markers for the characterization of Proteus mirabilis clinical isolates |
title_full_unstemmed |
Comparison of PCR-based molecular markers for the characterization of Proteus mirabilis clinical isolates |
title_sort |
Comparison of PCR-based molecular markers for the characterization of Proteus mirabilis clinical isolates |
author |
Michelim,Lessandra |
author_facet |
Michelim,Lessandra Muller,Gabriela Zacaria,Jucimar Delamare,Ana Paula Longaray Costa,Sérgio Olavo Pinto da Echeverrigaray,Sergio |
author_role |
author |
author2 |
Muller,Gabriela Zacaria,Jucimar Delamare,Ana Paula Longaray Costa,Sérgio Olavo Pinto da Echeverrigaray,Sergio |
author2_role |
author author author author author |
dc.contributor.author.fl_str_mv |
Michelim,Lessandra Muller,Gabriela Zacaria,Jucimar Delamare,Ana Paula Longaray Costa,Sérgio Olavo Pinto da Echeverrigaray,Sergio |
dc.subject.por.fl_str_mv |
Proteus mirabilis molecular markers fingerprinting PCR |
topic |
Proteus mirabilis molecular markers fingerprinting PCR |
description |
Proteus mirabilis is one of the most important pathogens associated with complicated urinary tract infections (acute pyelonephritis, bladder infections, kidney stones) and bacteremia, affecting patients with anatomical abnormalities, immunodeficiency, and long-term urinary catheterization. For epidemiological purposes, various molecular typing methods, such as pulse-field gel electrophoresis (PFGE) or ribotyping, have been developed for this pathogen. However, these methods are labor intensive and time-consuming. We evaluated the discriminatory power of several PCR-based fingerprinting methods (RAPD, ISSR, ERIC-PCR, BOX-PCR and rep-PCR) for P. mirabilis clinical isolates. Typing patterns and clustering analysis indicated that RAPD, BOX-PCR and ERIC-PCR differentiated P. mirabilis strains from Escherichia coli, Hafnia alvei, and Morganella morganii. With the exception of rep-PCR, the methods gave medium to high discriminatory efficiency in P. mirabilis. In general, the results obtained with RAPD, BOX-PCR and ERIC-PCR were in good agreement. We concluded that a combination of ERIC-PCR and BOX-PCR results is a rapid and reliable alternative for discrimination among P. mirabilis clinical isolates, contributing to epidemiological studies. |
publishDate |
2008 |
dc.date.none.fl_str_mv |
2008-10-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1413-86702008000500014 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1413-86702008000500014 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.1590/S1413-86702008000500014 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Brazilian Society of Infectious Diseases |
publisher.none.fl_str_mv |
Brazilian Society of Infectious Diseases |
dc.source.none.fl_str_mv |
Brazilian Journal of Infectious Diseases v.12 n.5 2008 reponame:Brazilian Journal of Infectious Diseases instname:Brazilian Society of Infectious Diseases (BSID) instacron:BSID |
instname_str |
Brazilian Society of Infectious Diseases (BSID) |
instacron_str |
BSID |
institution |
BSID |
reponame_str |
Brazilian Journal of Infectious Diseases |
collection |
Brazilian Journal of Infectious Diseases |
repository.name.fl_str_mv |
Brazilian Journal of Infectious Diseases - Brazilian Society of Infectious Diseases (BSID) |
repository.mail.fl_str_mv |
bjid@bjid.org.br||lgoldani@ufrgs.br |
_version_ |
1754209240624398336 |