A predictive score for COVID-19 diagnosis using clinical, laboratory and chest image data

Detalhes bibliográficos
Autor(a) principal: Vieceli,Tarsila
Data de Publicação: 2020
Outros Autores: Oliveira Filho,Cilomar Martins de, Berger,Mariana, Saadi,Marina Petersen, Salvador,Pedro Antonio, Anizelli,Leonardo Bressan, Crivelaro,Pedro Castilhos de Freitas, Butzke,Mauricio, Zappelini,Roberta de Souza, Seligman,Beatriz Graeff dos Santos, Seligman,Renato
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Brazilian Journal of Infectious Diseases
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1413-86702020000400343
Resumo: Abstract Objectives Differential diagnosis of COVID-19 includes a broad range of conditions. Prioritizing containment efforts, protective personal equipment and testing can be challenging. Our aim was to develop a tool to identify patients with higher probability of COVID-19 diagnosis at admission. Methods This cross-sectional study analyzed data from 100 patients admitted with suspected COVID-19. Predictive models of COVID-19 diagnosis were performed based on radiology, clinical and laboratory findings; bootstrapping was performed in order to account for overfitting. Results A total of 29% of patients tested positive for SARS-CoV-2. Variables associated with COVID-19 diagnosis in multivariate analysis were leukocyte count ≤7.7 × 103 mm–3, LDH >273 U/L, and chest radiographic abnormality. A predictive score was built for COVID-19 diagnosis, with an area under ROC curve of 0.847 (95% CI 0.77–0.92), 96% sensitivity and 73.5% specificity. After bootstrapping, the corrected AUC for this model was 0.827 (95% CI 0.75–0.90). Conclusions Considering unavailability of RT-PCR at some centers, as well as its questionable early sensitivity, other tools might be used in order to identify patients who should be prioritized for testing, re-testing and admission to isolated wards. We propose a predictive score that can be easily applied in clinical practice. This score is yet to be validated in larger populations.
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spelling A predictive score for COVID-19 diagnosis using clinical, laboratory and chest image dataDiagnosisCOVID-19SARS-CoV-2Predictive scoreAbstract Objectives Differential diagnosis of COVID-19 includes a broad range of conditions. Prioritizing containment efforts, protective personal equipment and testing can be challenging. Our aim was to develop a tool to identify patients with higher probability of COVID-19 diagnosis at admission. Methods This cross-sectional study analyzed data from 100 patients admitted with suspected COVID-19. Predictive models of COVID-19 diagnosis were performed based on radiology, clinical and laboratory findings; bootstrapping was performed in order to account for overfitting. Results A total of 29% of patients tested positive for SARS-CoV-2. Variables associated with COVID-19 diagnosis in multivariate analysis were leukocyte count ≤7.7 × 103 mm–3, LDH >273 U/L, and chest radiographic abnormality. A predictive score was built for COVID-19 diagnosis, with an area under ROC curve of 0.847 (95% CI 0.77–0.92), 96% sensitivity and 73.5% specificity. After bootstrapping, the corrected AUC for this model was 0.827 (95% CI 0.75–0.90). Conclusions Considering unavailability of RT-PCR at some centers, as well as its questionable early sensitivity, other tools might be used in order to identify patients who should be prioritized for testing, re-testing and admission to isolated wards. We propose a predictive score that can be easily applied in clinical practice. This score is yet to be validated in larger populations.Brazilian Society of Infectious Diseases2020-08-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1413-86702020000400343Brazilian Journal of Infectious Diseases v.24 n.4 2020reponame:Brazilian Journal of Infectious Diseasesinstname:Brazilian Society of Infectious Diseases (BSID)instacron:BSID10.1016/j.bjid.2020.06.009info:eu-repo/semantics/openAccessVieceli,TarsilaOliveira Filho,Cilomar Martins deBerger,MarianaSaadi,Marina PetersenSalvador,Pedro AntonioAnizelli,Leonardo BressanCrivelaro,Pedro Castilhos de FreitasButzke,MauricioZappelini,Roberta de SouzaSeligman,Beatriz Graeff dos SantosSeligman,Renatoeng2020-09-30T00:00:00Zoai:scielo:S1413-86702020000400343Revistahttps://www.bjid.org.br/https://old.scielo.br/oai/scielo-oai.phpbjid@bjid.org.br||lgoldani@ufrgs.br1678-43911413-8670opendoar:2020-09-30T00:00Brazilian Journal of Infectious Diseases - Brazilian Society of Infectious Diseases (BSID)false
dc.title.none.fl_str_mv A predictive score for COVID-19 diagnosis using clinical, laboratory and chest image data
title A predictive score for COVID-19 diagnosis using clinical, laboratory and chest image data
spellingShingle A predictive score for COVID-19 diagnosis using clinical, laboratory and chest image data
Vieceli,Tarsila
Diagnosis
COVID-19
SARS-CoV-2
Predictive score
title_short A predictive score for COVID-19 diagnosis using clinical, laboratory and chest image data
title_full A predictive score for COVID-19 diagnosis using clinical, laboratory and chest image data
title_fullStr A predictive score for COVID-19 diagnosis using clinical, laboratory and chest image data
title_full_unstemmed A predictive score for COVID-19 diagnosis using clinical, laboratory and chest image data
title_sort A predictive score for COVID-19 diagnosis using clinical, laboratory and chest image data
author Vieceli,Tarsila
author_facet Vieceli,Tarsila
Oliveira Filho,Cilomar Martins de
Berger,Mariana
Saadi,Marina Petersen
Salvador,Pedro Antonio
Anizelli,Leonardo Bressan
Crivelaro,Pedro Castilhos de Freitas
Butzke,Mauricio
Zappelini,Roberta de Souza
Seligman,Beatriz Graeff dos Santos
Seligman,Renato
author_role author
author2 Oliveira Filho,Cilomar Martins de
Berger,Mariana
Saadi,Marina Petersen
Salvador,Pedro Antonio
Anizelli,Leonardo Bressan
Crivelaro,Pedro Castilhos de Freitas
Butzke,Mauricio
Zappelini,Roberta de Souza
Seligman,Beatriz Graeff dos Santos
Seligman,Renato
author2_role author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Vieceli,Tarsila
Oliveira Filho,Cilomar Martins de
Berger,Mariana
Saadi,Marina Petersen
Salvador,Pedro Antonio
Anizelli,Leonardo Bressan
Crivelaro,Pedro Castilhos de Freitas
Butzke,Mauricio
Zappelini,Roberta de Souza
Seligman,Beatriz Graeff dos Santos
Seligman,Renato
dc.subject.por.fl_str_mv Diagnosis
COVID-19
SARS-CoV-2
Predictive score
topic Diagnosis
COVID-19
SARS-CoV-2
Predictive score
description Abstract Objectives Differential diagnosis of COVID-19 includes a broad range of conditions. Prioritizing containment efforts, protective personal equipment and testing can be challenging. Our aim was to develop a tool to identify patients with higher probability of COVID-19 diagnosis at admission. Methods This cross-sectional study analyzed data from 100 patients admitted with suspected COVID-19. Predictive models of COVID-19 diagnosis were performed based on radiology, clinical and laboratory findings; bootstrapping was performed in order to account for overfitting. Results A total of 29% of patients tested positive for SARS-CoV-2. Variables associated with COVID-19 diagnosis in multivariate analysis were leukocyte count ≤7.7 × 103 mm–3, LDH >273 U/L, and chest radiographic abnormality. A predictive score was built for COVID-19 diagnosis, with an area under ROC curve of 0.847 (95% CI 0.77–0.92), 96% sensitivity and 73.5% specificity. After bootstrapping, the corrected AUC for this model was 0.827 (95% CI 0.75–0.90). Conclusions Considering unavailability of RT-PCR at some centers, as well as its questionable early sensitivity, other tools might be used in order to identify patients who should be prioritized for testing, re-testing and admission to isolated wards. We propose a predictive score that can be easily applied in clinical practice. This score is yet to be validated in larger populations.
publishDate 2020
dc.date.none.fl_str_mv 2020-08-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1413-86702020000400343
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1413-86702020000400343
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1016/j.bjid.2020.06.009
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Brazilian Society of Infectious Diseases
publisher.none.fl_str_mv Brazilian Society of Infectious Diseases
dc.source.none.fl_str_mv Brazilian Journal of Infectious Diseases v.24 n.4 2020
reponame:Brazilian Journal of Infectious Diseases
instname:Brazilian Society of Infectious Diseases (BSID)
instacron:BSID
instname_str Brazilian Society of Infectious Diseases (BSID)
instacron_str BSID
institution BSID
reponame_str Brazilian Journal of Infectious Diseases
collection Brazilian Journal of Infectious Diseases
repository.name.fl_str_mv Brazilian Journal of Infectious Diseases - Brazilian Society of Infectious Diseases (BSID)
repository.mail.fl_str_mv bjid@bjid.org.br||lgoldani@ufrgs.br
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