Artificial neural networks and linear discriminant analysis in early selection among sugarcane families

Detalhes bibliográficos
Autor(a) principal: Peternelli,Luiz Alexandre
Data de Publicação: 2017
Outros Autores: Moreira,Édimo Fernando Alves, Nascimento,Moysés, Cruz,Cosme Damião
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Crop Breeding and Applied Biotechnology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332017000400299
Resumo: Abstract One of the major challenges in sugarcane breeding programs is an efficient selection of genotypes in the initial phase. The purpose of this study was to compare modelling by artificial neural networks (ANN) and linear discriminant analysis (LDA) as alternatives for the selection of promising sugarcane families based on the indirect traits number of sugarcane stalks (NS), stalk diameter (SD) and stalk height (SH). The analysis focused on two models, a full one with all predictors, and a reduced one, from which the variable SH was excluded. To compare and assess the applied methods, the apparent error rate (AER) and true positive rate (TPR) were used, derived from the confusion matrix. Modeling with ANN and LDA can be used successfully for selection among sugarcane families. The reduced model may be preferable, for having a low AER, high TPR and being easier to obtain in operational terms.
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spelling Artificial neural networks and linear discriminant analysis in early selection among sugarcane familiesPlant breedingartificial intelligencestatistical learningAbstract One of the major challenges in sugarcane breeding programs is an efficient selection of genotypes in the initial phase. The purpose of this study was to compare modelling by artificial neural networks (ANN) and linear discriminant analysis (LDA) as alternatives for the selection of promising sugarcane families based on the indirect traits number of sugarcane stalks (NS), stalk diameter (SD) and stalk height (SH). The analysis focused on two models, a full one with all predictors, and a reduced one, from which the variable SH was excluded. To compare and assess the applied methods, the apparent error rate (AER) and true positive rate (TPR) were used, derived from the confusion matrix. Modeling with ANN and LDA can be used successfully for selection among sugarcane families. The reduced model may be preferable, for having a low AER, high TPR and being easier to obtain in operational terms.Crop Breeding and Applied Biotechnology2017-12-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332017000400299Crop Breeding and Applied Biotechnology v.17 n.4 2017reponame:Crop Breeding and Applied Biotechnologyinstname:Sociedade Brasileira de Melhoramento de Plantasinstacron:CBAB10.1590/1984-70332017v17n4a46info:eu-repo/semantics/openAccessPeternelli,Luiz AlexandreMoreira,Édimo Fernando AlvesNascimento,MoysésCruz,Cosme Damiãoeng2017-11-23T00:00:00Zoai:scielo:S1984-70332017000400299Revistahttps://cbab.sbmp.org.br/#ONGhttps://old.scielo.br/oai/scielo-oai.phpcbabjournal@gmail.com||cbab@ufv.br1984-70331518-7853opendoar:2017-11-23T00:00Crop Breeding and Applied Biotechnology - Sociedade Brasileira de Melhoramento de Plantasfalse
dc.title.none.fl_str_mv Artificial neural networks and linear discriminant analysis in early selection among sugarcane families
title Artificial neural networks and linear discriminant analysis in early selection among sugarcane families
spellingShingle Artificial neural networks and linear discriminant analysis in early selection among sugarcane families
Peternelli,Luiz Alexandre
Plant breeding
artificial intelligence
statistical learning
title_short Artificial neural networks and linear discriminant analysis in early selection among sugarcane families
title_full Artificial neural networks and linear discriminant analysis in early selection among sugarcane families
title_fullStr Artificial neural networks and linear discriminant analysis in early selection among sugarcane families
title_full_unstemmed Artificial neural networks and linear discriminant analysis in early selection among sugarcane families
title_sort Artificial neural networks and linear discriminant analysis in early selection among sugarcane families
author Peternelli,Luiz Alexandre
author_facet Peternelli,Luiz Alexandre
Moreira,Édimo Fernando Alves
Nascimento,Moysés
Cruz,Cosme Damião
author_role author
author2 Moreira,Édimo Fernando Alves
Nascimento,Moysés
Cruz,Cosme Damião
author2_role author
author
author
dc.contributor.author.fl_str_mv Peternelli,Luiz Alexandre
Moreira,Édimo Fernando Alves
Nascimento,Moysés
Cruz,Cosme Damião
dc.subject.por.fl_str_mv Plant breeding
artificial intelligence
statistical learning
topic Plant breeding
artificial intelligence
statistical learning
description Abstract One of the major challenges in sugarcane breeding programs is an efficient selection of genotypes in the initial phase. The purpose of this study was to compare modelling by artificial neural networks (ANN) and linear discriminant analysis (LDA) as alternatives for the selection of promising sugarcane families based on the indirect traits number of sugarcane stalks (NS), stalk diameter (SD) and stalk height (SH). The analysis focused on two models, a full one with all predictors, and a reduced one, from which the variable SH was excluded. To compare and assess the applied methods, the apparent error rate (AER) and true positive rate (TPR) were used, derived from the confusion matrix. Modeling with ANN and LDA can be used successfully for selection among sugarcane families. The reduced model may be preferable, for having a low AER, high TPR and being easier to obtain in operational terms.
publishDate 2017
dc.date.none.fl_str_mv 2017-12-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332017000400299
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332017000400299
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/1984-70332017v17n4a46
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Crop Breeding and Applied Biotechnology
publisher.none.fl_str_mv Crop Breeding and Applied Biotechnology
dc.source.none.fl_str_mv Crop Breeding and Applied Biotechnology v.17 n.4 2017
reponame:Crop Breeding and Applied Biotechnology
instname:Sociedade Brasileira de Melhoramento de Plantas
instacron:CBAB
instname_str Sociedade Brasileira de Melhoramento de Plantas
instacron_str CBAB
institution CBAB
reponame_str Crop Breeding and Applied Biotechnology
collection Crop Breeding and Applied Biotechnology
repository.name.fl_str_mv Crop Breeding and Applied Biotechnology - Sociedade Brasileira de Melhoramento de Plantas
repository.mail.fl_str_mv cbabjournal@gmail.com||cbab@ufv.br
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