Bayesian estimation of genotypic and phenotypic correlations from crop variety trials
Autor(a) principal: | |
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Data de Publicação: | 2016 |
Outros Autores: | , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Crop Breeding and Applied Biotechnology |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332016000100014 |
Resumo: | Abstract Genotypic and phenotypic correlations are necessary for constructing indirect selection indices. Bayesian analysis, therefore, was applied to obtain posterior distributions of the correlations, and the estimates were compared with those under a frequentist approach. Three a priori distributions for standard deviation components based on uniform distribution, positive values from t- distribution, and positive values from normal distribution were examined, while a priori distribution for correlation was taken as a uniform distribution. The prior based on uniform was best found using the deviation information criterion. Data from sorghum genotypes evaluated in complete blocks in 2010-2011 in Northern Kordofan, Sudan, resulted in a posterior mean of 0.48 for genotypic correlation between seed yield and seed weight with posterior standard deviation of 0.24. Due to a wider inference base and the fact that it makes use of prior information, we recommend the Bayesian approach in estimation of genotypic correlations. |
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Crop Breeding and Applied Biotechnology |
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Bayesian estimation of genotypic and phenotypic correlations from crop variety trialsBayesian estimationgenotypic and phenotypic correlationsheritabilityR2WinBUGSAbstract Genotypic and phenotypic correlations are necessary for constructing indirect selection indices. Bayesian analysis, therefore, was applied to obtain posterior distributions of the correlations, and the estimates were compared with those under a frequentist approach. Three a priori distributions for standard deviation components based on uniform distribution, positive values from t- distribution, and positive values from normal distribution were examined, while a priori distribution for correlation was taken as a uniform distribution. The prior based on uniform was best found using the deviation information criterion. Data from sorghum genotypes evaluated in complete blocks in 2010-2011 in Northern Kordofan, Sudan, resulted in a posterior mean of 0.48 for genotypic correlation between seed yield and seed weight with posterior standard deviation of 0.24. Due to a wider inference base and the fact that it makes use of prior information, we recommend the Bayesian approach in estimation of genotypic correlations.Crop Breeding and Applied Biotechnology2016-03-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332016000100014Crop Breeding and Applied Biotechnology v.16 n.1 2016reponame:Crop Breeding and Applied Biotechnologyinstname:Sociedade Brasileira de Melhoramento de Plantasinstacron:CBAB10.1590/1984-70332016v16n1a3info:eu-repo/semantics/openAccessOmer,Siraj OsmanAbdalla,Abdel Wahab HMohammed,Mohammed H.Singh,Murarieng2016-04-19T00:00:00Zoai:scielo:S1984-70332016000100014Revistahttps://cbab.sbmp.org.br/#ONGhttps://old.scielo.br/oai/scielo-oai.phpcbabjournal@gmail.com||cbab@ufv.br1984-70331518-7853opendoar:2016-04-19T00:00Crop Breeding and Applied Biotechnology - Sociedade Brasileira de Melhoramento de Plantasfalse |
dc.title.none.fl_str_mv |
Bayesian estimation of genotypic and phenotypic correlations from crop variety trials |
title |
Bayesian estimation of genotypic and phenotypic correlations from crop variety trials |
spellingShingle |
Bayesian estimation of genotypic and phenotypic correlations from crop variety trials Omer,Siraj Osman Bayesian estimation genotypic and phenotypic correlations heritability R2WinBUGS |
title_short |
Bayesian estimation of genotypic and phenotypic correlations from crop variety trials |
title_full |
Bayesian estimation of genotypic and phenotypic correlations from crop variety trials |
title_fullStr |
Bayesian estimation of genotypic and phenotypic correlations from crop variety trials |
title_full_unstemmed |
Bayesian estimation of genotypic and phenotypic correlations from crop variety trials |
title_sort |
Bayesian estimation of genotypic and phenotypic correlations from crop variety trials |
author |
Omer,Siraj Osman |
author_facet |
Omer,Siraj Osman Abdalla,Abdel Wahab H Mohammed,Mohammed H. Singh,Murari |
author_role |
author |
author2 |
Abdalla,Abdel Wahab H Mohammed,Mohammed H. Singh,Murari |
author2_role |
author author author |
dc.contributor.author.fl_str_mv |
Omer,Siraj Osman Abdalla,Abdel Wahab H Mohammed,Mohammed H. Singh,Murari |
dc.subject.por.fl_str_mv |
Bayesian estimation genotypic and phenotypic correlations heritability R2WinBUGS |
topic |
Bayesian estimation genotypic and phenotypic correlations heritability R2WinBUGS |
description |
Abstract Genotypic and phenotypic correlations are necessary for constructing indirect selection indices. Bayesian analysis, therefore, was applied to obtain posterior distributions of the correlations, and the estimates were compared with those under a frequentist approach. Three a priori distributions for standard deviation components based on uniform distribution, positive values from t- distribution, and positive values from normal distribution were examined, while a priori distribution for correlation was taken as a uniform distribution. The prior based on uniform was best found using the deviation information criterion. Data from sorghum genotypes evaluated in complete blocks in 2010-2011 in Northern Kordofan, Sudan, resulted in a posterior mean of 0.48 for genotypic correlation between seed yield and seed weight with posterior standard deviation of 0.24. Due to a wider inference base and the fact that it makes use of prior information, we recommend the Bayesian approach in estimation of genotypic correlations. |
publishDate |
2016 |
dc.date.none.fl_str_mv |
2016-03-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332016000100014 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332016000100014 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.1590/1984-70332016v16n1a3 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Crop Breeding and Applied Biotechnology |
publisher.none.fl_str_mv |
Crop Breeding and Applied Biotechnology |
dc.source.none.fl_str_mv |
Crop Breeding and Applied Biotechnology v.16 n.1 2016 reponame:Crop Breeding and Applied Biotechnology instname:Sociedade Brasileira de Melhoramento de Plantas instacron:CBAB |
instname_str |
Sociedade Brasileira de Melhoramento de Plantas |
instacron_str |
CBAB |
institution |
CBAB |
reponame_str |
Crop Breeding and Applied Biotechnology |
collection |
Crop Breeding and Applied Biotechnology |
repository.name.fl_str_mv |
Crop Breeding and Applied Biotechnology - Sociedade Brasileira de Melhoramento de Plantas |
repository.mail.fl_str_mv |
cbabjournal@gmail.com||cbab@ufv.br |
_version_ |
1754209187096690688 |