Genomic Epidemiology and Lineage Dynamics of SARS-CoV-2 in Bulgaria: Insights from a Three-Year Pandemic Analysis
Autor(a) principal: | |
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Data de Publicação: | 2023 |
Outros Autores: | , , , , , , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da FIOCRUZ (ARCA) |
Texto Completo: | https://www.arca.fiocruz.br/handle/icict/61085 |
Resumo: | Fundação Oswaldo Cruz. Instituto Rene Rachou. Belo Horizonte. MG, Brazil / Sciences and Technologies for Sustainable Development and One Health. Università Campus Bio-Medico di Roma. Rome, Italy / Climate Amplified Diseases and Epidemics. Brazil. |
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Giovanetti, MartaCella, EleonoraIvanov, IvanGrigorova, LyubomiraStoikov, IvanDonchev, DeyanDimitrova, RenetaSlavov, Svetoslav NanevMavian, CarlaFonseca, VagnerScarpa, FabioBorsetti, AlessandraKorsun, NeliTrifonova, IvelinaDobrinov, VeselinKantardjiev, TodorChristova, IvaCiccozzi, MassimoAlexiev, Ivailo2023-11-07T19:20:26Z2023-11-07T19:20:26Z2023GIOVANETTI, Marta et al. Genomic Epidemiology and Lineage Dynamics of SARS-CoV-2 in Bulgaria: Insights from a Three-Year Pandemic Analysis. Viruses, v. 15, n. 9, p. 1-11, 2023.1999-4915https://www.arca.fiocruz.br/handle/icict/6108510.3390/v15091924engMPDIGenomic Epidemiology and Lineage Dynamics of SARS-CoV-2 in Bulgaria: Insights from a Three-Year Pandemic Analysisinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleFundação Oswaldo Cruz. Instituto Rene Rachou. Belo Horizonte. MG, Brazil / Sciences and Technologies for Sustainable Development and One Health. Università Campus Bio-Medico di Roma. Rome, Italy / Climate Amplified Diseases and Epidemics. Brazil.Burnett School of Biomedical Sciences. University of Central Florida. Orlando, FL, USA.National Center of Infectious and Parasitic Diseases. Sofia, Bulgaria.National Center of Infectious and Parasitic Diseases. Sofia, Bulgaria.National Center of Infectious and Parasitic Diseases. Sofia, Bulgaria.National Center of Infectious and Parasitic Diseases. Sofia, Bulgaria.National Center of Infectious and Parasitic Diseases. Sofia, Bulgaria.Butantan Institute. São Paulo, SP, Brazil / Blood Center of Ribeirão Preto. Faculty of Medicine of Ribeirão Preto. University of São Paulo. Ribeirão Preto, SP, Brazil.Emerging Pathogens Institute. Department of Pathology, Immunology and Laboratory Medicine. College of Medicine. University of Florida. Gainesville, FL, USA.Department of Exact and Earth Sciences. University of the State of Bahia. Salvador BA, Brazil / Organização Pan-Americana da Saúde/Organização Mundial da Saúde. Coordenação de Vigilância, Preparação e Resposta à Emergências e Desastres. Brasilia, DF, Brazil.Department of Biomedical Sciences. University of Sassari. Sassari, Italy.National HIV/AIDS Research Center. National Institute of Health. Rome, Italy.National Center of Infectious and Parasitic Diseases. Sofia, Bulgaria.National Center of Infectious and Parasitic Diseases. Sofia, Bulgaria.National Center of Infectious and Parasitic Diseases. Sofia, Bulgaria.National Center of Infectious and Parasitic Diseases. Sofia, Bulgaria.National Center of Infectious and Parasitic Diseases. Sofia, Bulgaria.Unit of Medical Statistics and Molecular Epidemiology. Universita Campus Bio-Medico di Roma. Rome, Italy.National Center of Infectious and Parasitic Diseases. Sofia, Bulgaria.The COVID-19 pandemic caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has brought about significant challenges worldwide. In this study, we present a comprehensive analysis of the genomic epidemiology and lineage dynamics of SARS-CoV-2 in Bulgaria over a three-year period. Through extensive genomic sequencing and data analysis, we investigated the evolution of the virus, the emergence of variants of concern (VOCs), and their impact on the country's pandemic trajectory. We also assessed the relationship between viral diversity and COVID-19 morbidity and mortality in Bulgaria. Our findings shed light on the temporal and spatial distribution of SARS-CoV-2 lineages and provide crucial insights into the dynamics of the pandemic in the country. The interplay between international travel and viral transmission plays a significant role in the emergence and dissemination of different SARS-CoV-2 variants. The observed proportions of exportation to various continents provide insights into the potential pathways through which these lineages spread globally. Understanding the genomic epidemiology of SARS-CoV-2 in Bulgaria is essential for formulating targeted public health strategies, enhancing vaccination efforts, and effectively managing future outbreaks.BulgariaSARS-CoV-2EpidemiologyGenomic surveillanceViral evolutionCOVID-19info:eu-repo/semantics/openAccessreponame:Repositório Institucional da FIOCRUZ (ARCA)instname:Fundação Oswaldo Cruz (FIOCRUZ)instacron:FIOCRUZLICENSElicense.txtlicense.txttext/plain; charset=utf-82991https://www.arca.fiocruz.br/bitstream/icict/61085/1/license.txt5a560609d32a3863062d77ff32785d58MD51ORIGINALGenomic Epidemiology and Lineage Dynamics of SARS-CoV-2 in Bulgaria_ Insights from a Three-Year Pandemic Analysis.pdfGenomic Epidemiology and Lineage Dynamics of SARS-CoV-2 in Bulgaria_ Insights from a Three-Year Pandemic Analysis.pdfapplication/pdf3163094https://www.arca.fiocruz.br/bitstream/icict/61085/2/Genomic%20Epidemiology%20and%20Lineage%20Dynamics%20of%20SARS-CoV-2%20in%20Bulgaria_%20Insights%20from%20a%20Three-Year%20Pandemic%20Analysis.pdf3b919500125350ae4f69750a77c178fbMD52icict/610852023-11-07 19:17:17.278oai:www.arca.fiocruz.br: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ório 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dc.title.en_US.fl_str_mv |
Genomic Epidemiology and Lineage Dynamics of SARS-CoV-2 in Bulgaria: Insights from a Three-Year Pandemic Analysis |
title |
Genomic Epidemiology and Lineage Dynamics of SARS-CoV-2 in Bulgaria: Insights from a Three-Year Pandemic Analysis |
spellingShingle |
Genomic Epidemiology and Lineage Dynamics of SARS-CoV-2 in Bulgaria: Insights from a Three-Year Pandemic Analysis Giovanetti, Marta Bulgaria SARS-CoV-2 Epidemiology Genomic surveillance Viral evolution COVID-19 |
title_short |
Genomic Epidemiology and Lineage Dynamics of SARS-CoV-2 in Bulgaria: Insights from a Three-Year Pandemic Analysis |
title_full |
Genomic Epidemiology and Lineage Dynamics of SARS-CoV-2 in Bulgaria: Insights from a Three-Year Pandemic Analysis |
title_fullStr |
Genomic Epidemiology and Lineage Dynamics of SARS-CoV-2 in Bulgaria: Insights from a Three-Year Pandemic Analysis |
title_full_unstemmed |
Genomic Epidemiology and Lineage Dynamics of SARS-CoV-2 in Bulgaria: Insights from a Three-Year Pandemic Analysis |
title_sort |
Genomic Epidemiology and Lineage Dynamics of SARS-CoV-2 in Bulgaria: Insights from a Three-Year Pandemic Analysis |
author |
Giovanetti, Marta |
author_facet |
Giovanetti, Marta Cella, Eleonora Ivanov, Ivan Grigorova, Lyubomira Stoikov, Ivan Donchev, Deyan Dimitrova, Reneta Slavov, Svetoslav Nanev Mavian, Carla Fonseca, Vagner Scarpa, Fabio Borsetti, Alessandra Korsun, Neli Trifonova, Ivelina Dobrinov, Veselin Kantardjiev, Todor Christova, Iva Ciccozzi, Massimo Alexiev, Ivailo |
author_role |
author |
author2 |
Cella, Eleonora Ivanov, Ivan Grigorova, Lyubomira Stoikov, Ivan Donchev, Deyan Dimitrova, Reneta Slavov, Svetoslav Nanev Mavian, Carla Fonseca, Vagner Scarpa, Fabio Borsetti, Alessandra Korsun, Neli Trifonova, Ivelina Dobrinov, Veselin Kantardjiev, Todor Christova, Iva Ciccozzi, Massimo Alexiev, Ivailo |
author2_role |
author author author author author author author author author author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Giovanetti, Marta Cella, Eleonora Ivanov, Ivan Grigorova, Lyubomira Stoikov, Ivan Donchev, Deyan Dimitrova, Reneta Slavov, Svetoslav Nanev Mavian, Carla Fonseca, Vagner Scarpa, Fabio Borsetti, Alessandra Korsun, Neli Trifonova, Ivelina Dobrinov, Veselin Kantardjiev, Todor Christova, Iva Ciccozzi, Massimo Alexiev, Ivailo |
dc.subject.en.en_US.fl_str_mv |
Bulgaria SARS-CoV-2 Epidemiology Genomic surveillance Viral evolution |
topic |
Bulgaria SARS-CoV-2 Epidemiology Genomic surveillance Viral evolution COVID-19 |
dc.subject.en.none.fl_str_mv |
COVID-19 |
description |
Fundação Oswaldo Cruz. Instituto Rene Rachou. Belo Horizonte. MG, Brazil / Sciences and Technologies for Sustainable Development and One Health. Università Campus Bio-Medico di Roma. Rome, Italy / Climate Amplified Diseases and Epidemics. Brazil. |
publishDate |
2023 |
dc.date.accessioned.fl_str_mv |
2023-11-07T19:20:26Z |
dc.date.available.fl_str_mv |
2023-11-07T19:20:26Z |
dc.date.issued.fl_str_mv |
2023 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.citation.fl_str_mv |
GIOVANETTI, Marta et al. Genomic Epidemiology and Lineage Dynamics of SARS-CoV-2 in Bulgaria: Insights from a Three-Year Pandemic Analysis. Viruses, v. 15, n. 9, p. 1-11, 2023. |
dc.identifier.uri.fl_str_mv |
https://www.arca.fiocruz.br/handle/icict/61085 |
dc.identifier.issn.en_US.fl_str_mv |
1999-4915 |
dc.identifier.doi.none.fl_str_mv |
10.3390/v15091924 |
identifier_str_mv |
GIOVANETTI, Marta et al. Genomic Epidemiology and Lineage Dynamics of SARS-CoV-2 in Bulgaria: Insights from a Three-Year Pandemic Analysis. Viruses, v. 15, n. 9, p. 1-11, 2023. 1999-4915 10.3390/v15091924 |
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https://www.arca.fiocruz.br/handle/icict/61085 |
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eng |
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eng |
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MPDI |
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