The mitochondrial genome of the phytopathogenic basidiomycete Moniliophthora perniciosa is 109 kb in size and contains a stable integrated plasmid

Detalhes bibliográficos
Autor(a) principal: Formighieri, Eduardo Fernandes
Data de Publicação: 2008
Outros Autores: Tiburcio, Ricardo A, Armas, Eduardo Dutra de, Medrano, Francisco Javier, Shimo, Hugo, Carels, Nicolas, Góes Neto, Aristóteles, Cotomacci, Carolina, Carazzolle, Marcelo Falsarella, Pinto, Naiara Sardinha, Thomazella, Daniela Paula de Toledo, Rincones, Johana, Digiampietri, Luciano, Carraro, Dirce Maria, Espin, Ana Maria Lima de Azeredo, Reis, Sérgio Furtado dos, Deckmann, Ana Carolina, Gramacho, Karina, Gonçalves, Marilda de Souza, Moura Neto, José Pereira de, Barbosa, Luciana Veiga, Meinhardt, Lyndel W, Cascardo, Júlio Cezar de Mattos, Pereira, Gonçalo Amarante Guimarães
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da FIOCRUZ (ARCA)
Texto Completo: https://www.arca.fiocruz.br/handle/icict/19391
Resumo: Gonçalves, Marilda de Souza Fundação Oswaldo Cruz. Centro de Pesquisas Gonçalo Moniz. Salvador, BA, Brasil “Documento produzido em parceria ou por autor vinculado à Fiocruz, mas não consta à informação no documento”. aLaboratório de Genômica e Expressão – Departamento de Genética e Evolução, Instituto de Biologia, Universidade Estadual de Campinas, 13083-970, Campinas – SP, Brazil bLaboratório de Ecotoxicologia, Centro de Energia Nuclear na Agricultura, Universidade de São Paulo, 13400-970, Piracicaba – SP, Brazil cLaboratório de Bioinformatica da Universidade Estadual de Santa Cruz, 45650-000, Ilhéus – BA, Brazil dLaboratório de Pesquisa em Microbiologia (LAPEM), Departamento de Ciências Biológicas, Universidade Estadual de Feira de Santana (UEFS), 44031-460, Feira de Santana – BA, Brazil eInstituto de Computação, Universidade Estadual de Campinas, 13084-971, Campinas – SP, Brazil fLudwig Institute For Cancer Research, 01509-010, São Paulo – SP, Brazil gDepartamento de Genética e Evolução e Laboratório de Genética Animal, Centro de Biologia Molecular e Engenharia Genética – CBMEG, Universidade Estadual de Campinas, 13035-875, Campinas – SP, Brazil hDepartamento de Parasitologia, Instituto de Biologia, Universidade Estadual de Campinas, 13083-970, Campinas – SP, Brazil iCEPLAC/CEPEC/SEFIT, 45600-970, Itabuna – BA, Brazil jLaboratoório de Biologia Molecular – Faculdade de Farmácia, Universidade Federal da Bahia, 40170-290, Salvador – BA, Brazil kLaboratório de Biologia Molecular – Departamento de Biologia Geral, Instituto de Biologia, Universidade Federal da Bahia, 40170-290, Salvador – BA, Brazil lSustainable Perennial Crops Laboratory, USDA-ARS, 10300 Baltimore, Av., BARC-W, Beltsville, MD 20740, USA mDepartamento de Ciências Biológicas, Universidade Estadual de Santa Cruz, 45650-000, Ilhéus – BA, Brazil
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spelling Formighieri, Eduardo FernandesTiburcio, Ricardo AArmas, Eduardo Dutra deMedrano, Francisco JavierShimo, HugoCarels, NicolasGóes Neto, AristótelesCotomacci, CarolinaCarazzolle, Marcelo FalsarellaPinto, Naiara SardinhaThomazella, Daniela Paula de ToledoRincones, JohanaDigiampietri, LucianoCarraro, Dirce MariaEspin, Ana Maria Lima de AzeredoReis, Sérgio Furtado dosDeckmann, Ana CarolinaGramacho, KarinaGonçalves, Marilda de SouzaMoura Neto, José Pereira deBarbosa, Luciana VeigaMeinhardt, Lyndel WCascardo, Júlio Cezar de MattosPereira, Gonçalo Amarante Guimarães2017-06-14T16:04:19Z2017-06-14T16:04:19Z2008FORMIGHIERI, E. F. et al. The mitochondrial genome of the phytopathogenic basidiomycete Moniliophthora perniciosa is 109 kb in size and contains a stable integrated plasmid. Mycological Research, v. 112, p. 1136–1152, 2008.0953-7562https://www.arca.fiocruz.br/handle/icict/1939110.1016/j.mycres.2008.04.014Gonçalves, Marilda de Souza Fundação Oswaldo Cruz. Centro de Pesquisas Gonçalo Moniz. Salvador, BA, Brasil “Documento produzido em parceria ou por autor vinculado à Fiocruz, mas não consta à informação no documento”. aLaboratório de Genômica e Expressão – Departamento de Genética e Evolução, Instituto de Biologia, Universidade Estadual de Campinas, 13083-970, Campinas – SP, Brazil bLaboratório de Ecotoxicologia, Centro de Energia Nuclear na Agricultura, Universidade de São Paulo, 13400-970, Piracicaba – SP, Brazil cLaboratório de Bioinformatica da Universidade Estadual de Santa Cruz, 45650-000, Ilhéus – BA, Brazil dLaboratório de Pesquisa em Microbiologia (LAPEM), Departamento de Ciências Biológicas, Universidade Estadual de Feira de Santana (UEFS), 44031-460, Feira de Santana – BA, Brazil eInstituto de Computação, Universidade Estadual de Campinas, 13084-971, Campinas – SP, Brazil fLudwig Institute For Cancer Research, 01509-010, São Paulo – SP, Brazil gDepartamento de Genética e Evolução e Laboratório de Genética Animal, Centro de Biologia Molecular e Engenharia Genética – CBMEG, Universidade Estadual de Campinas, 13035-875, Campinas – SP, Brazil hDepartamento de Parasitologia, Instituto de Biologia, Universidade Estadual de Campinas, 13083-970, Campinas – SP, Brazil iCEPLAC/CEPEC/SEFIT, 45600-970, Itabuna – BA, Brazil jLaboratoório de Biologia Molecular – Faculdade de Farmácia, Universidade Federal da Bahia, 40170-290, Salvador – BA, Brazil kLaboratório de Biologia Molecular – Departamento de Biologia Geral, Instituto de Biologia, Universidade Federal da Bahia, 40170-290, Salvador – BA, Brazil lSustainable Perennial Crops Laboratory, USDA-ARS, 10300 Baltimore, Av., BARC-W, Beltsville, MD 20740, USA mDepartamento de Ciências Biológicas, Universidade Estadual de Santa Cruz, 45650-000, Ilhéus – BA, BrazilBrazilian agencies CNPq (research fellowship to N. C.), Capes, CNPq Regional Genoma Program, SEAGRIm and FAPESP (No. 02/09280-1).Múltipla – ver em NotasWe present here the sequence of the mitochondrial genome of the basidiomycete phytopathogenic hemibiotrophic fungus Moniliophthora perniciosa, causal agent of the Witches' Broom Disease in Theobroma cacao. The DNA is a circular molecule of 109,103 base pairs, with 31.9% GC, and is the largest sequenced so far. This size is due essentially to the presence of numerous non-conserved hypothetical ORFs. It contains the 14 genes coding for proteins involved in the oxidative phosphorylation, the two rRNA genes, one ORF coding for a ribosomal protein (rps3), and a set of 26 tRNA genes that recognize codons for all amino acids. Seven homing endonucleases are located inside introns. Except atp8, all conserved known genes are in the same orientation. Phylogenetic analysis based on the cox genes agrees with the commonly accepted fungal taxonomy. An uncommon feature of this mitochondrial genome is the presence of a region that contains a set of four, relatively small, nested, inverted repeats enclosing two genes coding for polymerases with an invertron-type structure and three conserved hypothetical genes interpreted as the stable integration of a mitochondrial linear plasmid. The integration of this plasmid seems to be a recent evolutionary event that could have implications in fungal biology. 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dc.title.pt_BR.fl_str_mv The mitochondrial genome of the phytopathogenic basidiomycete Moniliophthora perniciosa is 109 kb in size and contains a stable integrated plasmid
title The mitochondrial genome of the phytopathogenic basidiomycete Moniliophthora perniciosa is 109 kb in size and contains a stable integrated plasmid
spellingShingle The mitochondrial genome of the phytopathogenic basidiomycete Moniliophthora perniciosa is 109 kb in size and contains a stable integrated plasmid
Formighieri, Eduardo Fernandes
Basidiomycota
Uso de códon
Crinipellis perniciosa
Genômica
Marasmiaceae
Doença das vassouras das bruxas
Basidiomycota
Codon usage
Crinipellis perniciosa
Genomics
Marasmiaceae
Witches’ broom disease
title_short The mitochondrial genome of the phytopathogenic basidiomycete Moniliophthora perniciosa is 109 kb in size and contains a stable integrated plasmid
title_full The mitochondrial genome of the phytopathogenic basidiomycete Moniliophthora perniciosa is 109 kb in size and contains a stable integrated plasmid
title_fullStr The mitochondrial genome of the phytopathogenic basidiomycete Moniliophthora perniciosa is 109 kb in size and contains a stable integrated plasmid
title_full_unstemmed The mitochondrial genome of the phytopathogenic basidiomycete Moniliophthora perniciosa is 109 kb in size and contains a stable integrated plasmid
title_sort The mitochondrial genome of the phytopathogenic basidiomycete Moniliophthora perniciosa is 109 kb in size and contains a stable integrated plasmid
author Formighieri, Eduardo Fernandes
author_facet Formighieri, Eduardo Fernandes
Tiburcio, Ricardo A
Armas, Eduardo Dutra de
Medrano, Francisco Javier
Shimo, Hugo
Carels, Nicolas
Góes Neto, Aristóteles
Cotomacci, Carolina
Carazzolle, Marcelo Falsarella
Pinto, Naiara Sardinha
Thomazella, Daniela Paula de Toledo
Rincones, Johana
Digiampietri, Luciano
Carraro, Dirce Maria
Espin, Ana Maria Lima de Azeredo
Reis, Sérgio Furtado dos
Deckmann, Ana Carolina
Gramacho, Karina
Gonçalves, Marilda de Souza
Moura Neto, José Pereira de
Barbosa, Luciana Veiga
Meinhardt, Lyndel W
Cascardo, Júlio Cezar de Mattos
Pereira, Gonçalo Amarante Guimarães
author_role author
author2 Tiburcio, Ricardo A
Armas, Eduardo Dutra de
Medrano, Francisco Javier
Shimo, Hugo
Carels, Nicolas
Góes Neto, Aristóteles
Cotomacci, Carolina
Carazzolle, Marcelo Falsarella
Pinto, Naiara Sardinha
Thomazella, Daniela Paula de Toledo
Rincones, Johana
Digiampietri, Luciano
Carraro, Dirce Maria
Espin, Ana Maria Lima de Azeredo
Reis, Sérgio Furtado dos
Deckmann, Ana Carolina
Gramacho, Karina
Gonçalves, Marilda de Souza
Moura Neto, José Pereira de
Barbosa, Luciana Veiga
Meinhardt, Lyndel W
Cascardo, Júlio Cezar de Mattos
Pereira, Gonçalo Amarante Guimarães
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Formighieri, Eduardo Fernandes
Tiburcio, Ricardo A
Armas, Eduardo Dutra de
Medrano, Francisco Javier
Shimo, Hugo
Carels, Nicolas
Góes Neto, Aristóteles
Cotomacci, Carolina
Carazzolle, Marcelo Falsarella
Pinto, Naiara Sardinha
Thomazella, Daniela Paula de Toledo
Rincones, Johana
Digiampietri, Luciano
Carraro, Dirce Maria
Espin, Ana Maria Lima de Azeredo
Reis, Sérgio Furtado dos
Deckmann, Ana Carolina
Gramacho, Karina
Gonçalves, Marilda de Souza
Moura Neto, José Pereira de
Barbosa, Luciana Veiga
Meinhardt, Lyndel W
Cascardo, Júlio Cezar de Mattos
Pereira, Gonçalo Amarante Guimarães
dc.subject.other.pt_BR.fl_str_mv Basidiomycota
Uso de códon
Crinipellis perniciosa
Genômica
Marasmiaceae
Doença das vassouras das bruxas
topic Basidiomycota
Uso de códon
Crinipellis perniciosa
Genômica
Marasmiaceae
Doença das vassouras das bruxas
Basidiomycota
Codon usage
Crinipellis perniciosa
Genomics
Marasmiaceae
Witches’ broom disease
dc.subject.en.pt_BR.fl_str_mv Basidiomycota
Codon usage
Crinipellis perniciosa
Genomics
Marasmiaceae
Witches’ broom disease
description Gonçalves, Marilda de Souza Fundação Oswaldo Cruz. Centro de Pesquisas Gonçalo Moniz. Salvador, BA, Brasil “Documento produzido em parceria ou por autor vinculado à Fiocruz, mas não consta à informação no documento”. aLaboratório de Genômica e Expressão – Departamento de Genética e Evolução, Instituto de Biologia, Universidade Estadual de Campinas, 13083-970, Campinas – SP, Brazil bLaboratório de Ecotoxicologia, Centro de Energia Nuclear na Agricultura, Universidade de São Paulo, 13400-970, Piracicaba – SP, Brazil cLaboratório de Bioinformatica da Universidade Estadual de Santa Cruz, 45650-000, Ilhéus – BA, Brazil dLaboratório de Pesquisa em Microbiologia (LAPEM), Departamento de Ciências Biológicas, Universidade Estadual de Feira de Santana (UEFS), 44031-460, Feira de Santana – BA, Brazil eInstituto de Computação, Universidade Estadual de Campinas, 13084-971, Campinas – SP, Brazil fLudwig Institute For Cancer Research, 01509-010, São Paulo – SP, Brazil gDepartamento de Genética e Evolução e Laboratório de Genética Animal, Centro de Biologia Molecular e Engenharia Genética – CBMEG, Universidade Estadual de Campinas, 13035-875, Campinas – SP, Brazil hDepartamento de Parasitologia, Instituto de Biologia, Universidade Estadual de Campinas, 13083-970, Campinas – SP, Brazil iCEPLAC/CEPEC/SEFIT, 45600-970, Itabuna – BA, Brazil jLaboratoório de Biologia Molecular – Faculdade de Farmácia, Universidade Federal da Bahia, 40170-290, Salvador – BA, Brazil kLaboratório de Biologia Molecular – Departamento de Biologia Geral, Instituto de Biologia, Universidade Federal da Bahia, 40170-290, Salvador – BA, Brazil lSustainable Perennial Crops Laboratory, USDA-ARS, 10300 Baltimore, Av., BARC-W, Beltsville, MD 20740, USA mDepartamento de Ciências Biológicas, Universidade Estadual de Santa Cruz, 45650-000, Ilhéus – BA, Brazil
publishDate 2008
dc.date.issued.fl_str_mv 2008
dc.date.accessioned.fl_str_mv 2017-06-14T16:04:19Z
dc.date.available.fl_str_mv 2017-06-14T16:04:19Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.citation.fl_str_mv FORMIGHIERI, E. F. et al. The mitochondrial genome of the phytopathogenic basidiomycete Moniliophthora perniciosa is 109 kb in size and contains a stable integrated plasmid. Mycological Research, v. 112, p. 1136–1152, 2008.
dc.identifier.uri.fl_str_mv https://www.arca.fiocruz.br/handle/icict/19391
dc.identifier.issn.pt_BR.fl_str_mv 0953-7562
dc.identifier.doi.none.fl_str_mv 10.1016/j.mycres.2008.04.014
identifier_str_mv FORMIGHIERI, E. F. et al. The mitochondrial genome of the phytopathogenic basidiomycete Moniliophthora perniciosa is 109 kb in size and contains a stable integrated plasmid. Mycological Research, v. 112, p. 1136–1152, 2008.
0953-7562
10.1016/j.mycres.2008.04.014
url https://www.arca.fiocruz.br/handle/icict/19391
dc.language.iso.fl_str_mv eng
language eng
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