Real-Time Genomic Surveillance during the 2021 Re-Emergence of the Yellow Fever Virus in Rio Grande do Sul State, Brazil

Detalhes bibliográficos
Autor(a) principal: Andrade, Miguel de S.
Data de Publicação: 2021
Outros Autores: Campos, Fabrício S., Campos, Aline A. S., Abreu, Filipe Vieira Santos de, Melo, Fernando L., Sevá, Anaiá da, Cardoso, Jader da C., Santos, Edmilson dos, Born, Lucas C., Silva, Cláudia M. D. da, Müller, Nicolas F. D., Oliveira, Cirilo H. de, Silva, Alex J. J. da, Simonini-Teixeira, Danilo, Valle, Sofía Bernal, Mares-Guia, Maria A. M. M., Albuquerque, George R., Romano, Alessandro P. M., Franco, Ana C., Ribeiro, Bergmann M., Roche, Paulo M., Almeida, Marco A. B. de
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da FIOCRUZ (ARCA)
Texto Completo: https://www.arca.fiocruz.br/handle/icict/51118
Resumo: Universidade de Brasília. Instituto de Ciências Biologicas. Departamento de Biologia Celular. Laboratório de Baculovírus. Brasília, DF, Brasil.
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spelling Andrade, Miguel de S.Campos, Fabrício S.Campos, Aline A. S.Abreu, Filipe Vieira Santos deMelo, Fernando L.Sevá, Anaiá daCardoso, Jader da C.Santos, Edmilson dosBorn, Lucas C.Silva, Cláudia M. D. daMüller, Nicolas F. D.Oliveira, Cirilo H. deSilva, Alex J. J. daSimonini-Teixeira, DaniloValle, Sofía BernalMares-Guia, Maria A. M. M.Albuquerque, George R.Romano, Alessandro P. M.Franco, Ana C.Ribeiro, Bergmann M.Roche, Paulo M.Almeida, Marco A. B. de2022-02-09T17:37:23Z2022-02-09T17:37:23Z2021ANDRADE, Miguel de S. et al. Real-Time Genomic Surveillance during the 2021 Re-Emergence of the Yellow Fever Virus in Rio Grande do Sul State, Brazil. Viruses, v. 13, 1976, p. 1 - 12, Oct. 2021.1999-4915https://www.arca.fiocruz.br/handle/icict/5111810.3390/v13101976engMDPIEpizoóticaPrimatas não humanosAnálise filogenéticaEpizooticPhylogenetic analysisNon-human primatesReal-Time Genomic Surveillance during the 2021 Re-Emergence of the Yellow Fever Virus in Rio Grande do Sul State, Brazilinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleUniversidade de Brasília. Instituto de Ciências Biologicas. Departamento de Biologia Celular. Laboratório de Baculovírus. Brasília, DF, Brasil.Universidade Federal de Tocantins. Campus do Gurupi. Laboratório de Bioinformática e Biotecnologia. Gurupi, TO, Brasil.Departamento Estadual de Saúde do Rio Grande do Sul. Centro Estadual de Vigilância Sanitária. Porto Alegre, RS, Brasil.Instituto Federal do Norte de Minas Gerais. Laboratório de Comportamento de Insetos. Salinas, MG, Brasil.Universidade de Brasília. Instituto de Ciências Biologicas. Departamento de Biologia Celular. Laboratório de Baculovírus. Brasília, DF, Brasil. de Brasília. Instituto de Ciências Biologicas. Departamento de Biologia Celular. Laboratório de Baculovírus. Brasília, DF, Brasil.Universidade Estadual de Santa Cruz. Departamento de Ciências Agrárias e Ambientais. Ilhéus, BA, Brasil.Departamento Estadual de Saúde do Rio Grande do Sul. Centro Estadual de Vigilância Sanitária. Porto Alegre, RS, Brasil.Departamento Estadual de Saúde do Rio Grande do Sul. Centro Estadual de Vigilância Sanitária. Porto Alegre, RS, Brasil.Departamento Estadual de Saúde do Rio Grande do Sul. Centro Estadual de Vigilância Sanitária. Porto Alegre, RS, Brasil.Departamento Estadual de Saúde do Rio Grande do Sul. Centro Estadual de Vigilância Sanitária. Porto Alegre, RS, Brasil.Universidade Federal do Rio Grande do Sul. Instituto de Ciências Básicas da Saúde. Porto Alegre, RS, Brasil.Instituto Federal do Norte de Minas Gerais. Laboratório de Comportamento de Insetos. Salinas, MG, Brasil.Instituto Federal do Norte de Minas Gerais. Laboratório de Comportamento de Insetos. Salinas, MG, Brasil.Universidade Estadual de Santa Cruz. Departamento de Ciências Agrárias e Ambientais. Ilhéus, BA, Brasil.Universidade Estadual de Santa Cruz. Departamento de Ciências Agrárias e Ambientais. Ilhéus, BA, Brasil.Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Flavivírus. Rio de Janeiro, RJ, Brasil.Universidade Estadual de Santa Cruz. Departamento de Ciências Agrárias e Ambientais. Ilhéus, BA, Brasil.Ministério da Saúde. Coordenação Geral de Vigilância de Arbovírus. Brasília, DF, Brasil.Universidade Federal do Rio Grande do Sul. Instituto de Ciências Básicas da Saúde. Porto Alegre, RS, Brasil.Universidade de Brasília. Instituto de Ciências Biologicas. Departamento de Biologia Celular. Laboratório de Baculovírus. Brasília, DF, Brasil.Universidade Federal do Rio Grande do Sul. Instituto de Ciências Básicas da Saúde. Porto Alegre, RS, BrasilDepartamento Estadual de Saúde do Rio Grande do Sul. Centro Estadual de Vigilância Sanitária. Porto Alegre, RS, Brasil.The 2021 re-emergence of yellow fever in non-human primates in the state of Rio Grande do Sul (RS), southernmost Brazil, resulted in the death of many howler monkeys (genus Alouatta) and led the state to declare a Public Health Emergency of State Importance, despite no human cases reported. In this study, near-complete genomes of yellow fever virus (YFV) recovered from the outbreak were sequenced and examined aiming at a better understanding of the phylogenetic relationships and the spatio-temporal dynamics of the virus distribution. Our results suggest that the most likely sequence of events involved the reintroduction of YFV from the state of São Paulo to RS through the states of Paraná and Santa Catarina, by the end of 2020. These findings reinforce the role of genomic surveillance in determining the pathways of distribution of the virus and in providing references for the implementation of preventive measures for populations in high risk areas.info:eu-repo/semantics/openAccessreponame:Repositório Institucional da FIOCRUZ (ARCA)instname:Fundação Oswaldo Cruz (FIOCRUZ)instacron:FIOCRUZLICENSElicense.txtlicense.txttext/plain; charset=utf-82991https://www.arca.fiocruz.br/bitstream/icict/51118/1/license.txt5a560609d32a3863062d77ff32785d58MD51ORIGINALMariaAMM_MaresGuia_etal_IOC_2021.pdfMariaAMM_MaresGuia_etal_IOC_2021.pdfapplication/pdf2422634https://www.arca.fiocruz.br/bitstream/icict/51118/2/MariaAMM_MaresGuia_etal_IOC_2021.pdf2eb0725fce7ee106045c680e5505f0dfMD52icict/511182022-11-29 14:57:39.404oai:www.arca.fiocruz.br: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ório InstitucionalPUBhttps://www.arca.fiocruz.br/oai/requestrepositorio.arca@fiocruz.bropendoar:21352022-11-29T17:57:39Repositório Institucional da FIOCRUZ (ARCA) - 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dc.title.pt_BR.fl_str_mv Real-Time Genomic Surveillance during the 2021 Re-Emergence of the Yellow Fever Virus in Rio Grande do Sul State, Brazil
title Real-Time Genomic Surveillance during the 2021 Re-Emergence of the Yellow Fever Virus in Rio Grande do Sul State, Brazil
spellingShingle Real-Time Genomic Surveillance during the 2021 Re-Emergence of the Yellow Fever Virus in Rio Grande do Sul State, Brazil
Andrade, Miguel de S.
Epizoótica
Primatas não humanos
Análise filogenética
Epizootic
Phylogenetic analysis
Non-human primates
title_short Real-Time Genomic Surveillance during the 2021 Re-Emergence of the Yellow Fever Virus in Rio Grande do Sul State, Brazil
title_full Real-Time Genomic Surveillance during the 2021 Re-Emergence of the Yellow Fever Virus in Rio Grande do Sul State, Brazil
title_fullStr Real-Time Genomic Surveillance during the 2021 Re-Emergence of the Yellow Fever Virus in Rio Grande do Sul State, Brazil
title_full_unstemmed Real-Time Genomic Surveillance during the 2021 Re-Emergence of the Yellow Fever Virus in Rio Grande do Sul State, Brazil
title_sort Real-Time Genomic Surveillance during the 2021 Re-Emergence of the Yellow Fever Virus in Rio Grande do Sul State, Brazil
author Andrade, Miguel de S.
author_facet Andrade, Miguel de S.
Campos, Fabrício S.
Campos, Aline A. S.
Abreu, Filipe Vieira Santos de
Melo, Fernando L.
Sevá, Anaiá da
Cardoso, Jader da C.
Santos, Edmilson dos
Born, Lucas C.
Silva, Cláudia M. D. da
Müller, Nicolas F. D.
Oliveira, Cirilo H. de
Silva, Alex J. J. da
Simonini-Teixeira, Danilo
Valle, Sofía Bernal
Mares-Guia, Maria A. M. M.
Albuquerque, George R.
Romano, Alessandro P. M.
Franco, Ana C.
Ribeiro, Bergmann M.
Roche, Paulo M.
Almeida, Marco A. B. de
author_role author
author2 Campos, Fabrício S.
Campos, Aline A. S.
Abreu, Filipe Vieira Santos de
Melo, Fernando L.
Sevá, Anaiá da
Cardoso, Jader da C.
Santos, Edmilson dos
Born, Lucas C.
Silva, Cláudia M. D. da
Müller, Nicolas F. D.
Oliveira, Cirilo H. de
Silva, Alex J. J. da
Simonini-Teixeira, Danilo
Valle, Sofía Bernal
Mares-Guia, Maria A. M. M.
Albuquerque, George R.
Romano, Alessandro P. M.
Franco, Ana C.
Ribeiro, Bergmann M.
Roche, Paulo M.
Almeida, Marco A. B. de
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Andrade, Miguel de S.
Campos, Fabrício S.
Campos, Aline A. S.
Abreu, Filipe Vieira Santos de
Melo, Fernando L.
Sevá, Anaiá da
Cardoso, Jader da C.
Santos, Edmilson dos
Born, Lucas C.
Silva, Cláudia M. D. da
Müller, Nicolas F. D.
Oliveira, Cirilo H. de
Silva, Alex J. J. da
Simonini-Teixeira, Danilo
Valle, Sofía Bernal
Mares-Guia, Maria A. M. M.
Albuquerque, George R.
Romano, Alessandro P. M.
Franco, Ana C.
Ribeiro, Bergmann M.
Roche, Paulo M.
Almeida, Marco A. B. de
dc.subject.other.pt_BR.fl_str_mv Epizoótica
Primatas não humanos
Análise filogenética
topic Epizoótica
Primatas não humanos
Análise filogenética
Epizootic
Phylogenetic analysis
Non-human primates
dc.subject.en.pt_BR.fl_str_mv Epizootic
Phylogenetic analysis
Non-human primates
description Universidade de Brasília. Instituto de Ciências Biologicas. Departamento de Biologia Celular. Laboratório de Baculovírus. Brasília, DF, Brasil.
publishDate 2021
dc.date.issued.fl_str_mv 2021
dc.date.accessioned.fl_str_mv 2022-02-09T17:37:23Z
dc.date.available.fl_str_mv 2022-02-09T17:37:23Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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status_str publishedVersion
dc.identifier.citation.fl_str_mv ANDRADE, Miguel de S. et al. Real-Time Genomic Surveillance during the 2021 Re-Emergence of the Yellow Fever Virus in Rio Grande do Sul State, Brazil. Viruses, v. 13, 1976, p. 1 - 12, Oct. 2021.
dc.identifier.uri.fl_str_mv https://www.arca.fiocruz.br/handle/icict/51118
dc.identifier.issn.pt_BR.fl_str_mv 1999-4915
dc.identifier.doi.none.fl_str_mv 10.3390/v13101976
identifier_str_mv ANDRADE, Miguel de S. et al. Real-Time Genomic Surveillance during the 2021 Re-Emergence of the Yellow Fever Virus in Rio Grande do Sul State, Brazil. Viruses, v. 13, 1976, p. 1 - 12, Oct. 2021.
1999-4915
10.3390/v13101976
url https://www.arca.fiocruz.br/handle/icict/51118
dc.language.iso.fl_str_mv eng
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dc.publisher.none.fl_str_mv MDPI
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https://www.arca.fiocruz.br/bitstream/icict/51118/2/MariaAMM_MaresGuia_etal_IOC_2021.pdf
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