Real-Time Genomic Surveillance during the 2021 Re-Emergence of the Yellow Fever Virus in Rio Grande do Sul State, Brazil
| Autor(a) principal: | |
|---|---|
| Data de Publicação: | 2021 |
| Outros Autores: | , , , , , , , , , , , , , , , , , , , , |
| Tipo de documento: | Artigo |
| Idioma: | eng |
| Título da fonte: | Repositório Institucional da FIOCRUZ (ARCA) |
| Texto Completo: | https://www.arca.fiocruz.br/handle/icict/51118 |
Resumo: | Universidade de Brasília. Instituto de Ciências Biologicas. Departamento de Biologia Celular. Laboratório de Baculovírus. Brasília, DF, Brasil. |
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Andrade, Miguel de S.Campos, Fabrício S.Campos, Aline A. S.Abreu, Filipe Vieira Santos deMelo, Fernando L.Sevá, Anaiá daCardoso, Jader da C.Santos, Edmilson dosBorn, Lucas C.Silva, Cláudia M. D. daMüller, Nicolas F. D.Oliveira, Cirilo H. deSilva, Alex J. J. daSimonini-Teixeira, DaniloValle, Sofía BernalMares-Guia, Maria A. M. M.Albuquerque, George R.Romano, Alessandro P. M.Franco, Ana C.Ribeiro, Bergmann M.Roche, Paulo M.Almeida, Marco A. B. de2022-02-09T17:37:23Z2022-02-09T17:37:23Z2021ANDRADE, Miguel de S. et al. Real-Time Genomic Surveillance during the 2021 Re-Emergence of the Yellow Fever Virus in Rio Grande do Sul State, Brazil. Viruses, v. 13, 1976, p. 1 - 12, Oct. 2021.1999-4915https://www.arca.fiocruz.br/handle/icict/5111810.3390/v13101976engMDPIEpizoóticaPrimatas não humanosAnálise filogenéticaEpizooticPhylogenetic analysisNon-human primatesReal-Time Genomic Surveillance during the 2021 Re-Emergence of the Yellow Fever Virus in Rio Grande do Sul State, Brazilinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleUniversidade de Brasília. Instituto de Ciências Biologicas. Departamento de Biologia Celular. Laboratório de Baculovírus. Brasília, DF, Brasil.Universidade Federal de Tocantins. Campus do Gurupi. Laboratório de Bioinformática e Biotecnologia. Gurupi, TO, Brasil.Departamento Estadual de Saúde do Rio Grande do Sul. Centro Estadual de Vigilância Sanitária. Porto Alegre, RS, Brasil.Instituto Federal do Norte de Minas Gerais. Laboratório de Comportamento de Insetos. Salinas, MG, Brasil.Universidade de Brasília. Instituto de Ciências Biologicas. Departamento de Biologia Celular. Laboratório de Baculovírus. Brasília, DF, Brasil. de Brasília. Instituto de Ciências Biologicas. Departamento de Biologia Celular. Laboratório de Baculovírus. Brasília, DF, Brasil.Universidade Estadual de Santa Cruz. Departamento de Ciências Agrárias e Ambientais. Ilhéus, BA, Brasil.Departamento Estadual de Saúde do Rio Grande do Sul. Centro Estadual de Vigilância Sanitária. Porto Alegre, RS, Brasil.Departamento Estadual de Saúde do Rio Grande do Sul. Centro Estadual de Vigilância Sanitária. Porto Alegre, RS, Brasil.Departamento Estadual de Saúde do Rio Grande do Sul. Centro Estadual de Vigilância Sanitária. Porto Alegre, RS, Brasil.Departamento Estadual de Saúde do Rio Grande do Sul. Centro Estadual de Vigilância Sanitária. Porto Alegre, RS, Brasil.Universidade Federal do Rio Grande do Sul. Instituto de Ciências Básicas da Saúde. Porto Alegre, RS, Brasil.Instituto Federal do Norte de Minas Gerais. Laboratório de Comportamento de Insetos. Salinas, MG, Brasil.Instituto Federal do Norte de Minas Gerais. Laboratório de Comportamento de Insetos. Salinas, MG, Brasil.Universidade Estadual de Santa Cruz. Departamento de Ciências Agrárias e Ambientais. Ilhéus, BA, Brasil.Universidade Estadual de Santa Cruz. Departamento de Ciências Agrárias e Ambientais. Ilhéus, BA, Brasil.Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Flavivírus. Rio de Janeiro, RJ, Brasil.Universidade Estadual de Santa Cruz. Departamento de Ciências Agrárias e Ambientais. Ilhéus, BA, Brasil.Ministério da Saúde. Coordenação Geral de Vigilância de Arbovírus. Brasília, DF, Brasil.Universidade Federal do Rio Grande do Sul. Instituto de Ciências Básicas da Saúde. Porto Alegre, RS, Brasil.Universidade de Brasília. Instituto de Ciências Biologicas. Departamento de Biologia Celular. Laboratório de Baculovírus. Brasília, DF, Brasil.Universidade Federal do Rio Grande do Sul. Instituto de Ciências Básicas da Saúde. Porto Alegre, RS, BrasilDepartamento Estadual de Saúde do Rio Grande do Sul. Centro Estadual de Vigilância Sanitária. Porto Alegre, RS, Brasil.The 2021 re-emergence of yellow fever in non-human primates in the state of Rio Grande do Sul (RS), southernmost Brazil, resulted in the death of many howler monkeys (genus Alouatta) and led the state to declare a Public Health Emergency of State Importance, despite no human cases reported. In this study, near-complete genomes of yellow fever virus (YFV) recovered from the outbreak were sequenced and examined aiming at a better understanding of the phylogenetic relationships and the spatio-temporal dynamics of the virus distribution. Our results suggest that the most likely sequence of events involved the reintroduction of YFV from the state of São Paulo to RS through the states of Paraná and Santa Catarina, by the end of 2020. These findings reinforce the role of genomic surveillance in determining the pathways of distribution of the virus and in providing references for the implementation of preventive measures for populations in high risk areas.info:eu-repo/semantics/openAccessreponame:Repositório Institucional da FIOCRUZ (ARCA)instname:Fundação Oswaldo Cruz (FIOCRUZ)instacron:FIOCRUZLICENSElicense.txtlicense.txttext/plain; charset=utf-82991https://www.arca.fiocruz.br/bitstream/icict/51118/1/license.txt5a560609d32a3863062d77ff32785d58MD51ORIGINALMariaAMM_MaresGuia_etal_IOC_2021.pdfMariaAMM_MaresGuia_etal_IOC_2021.pdfapplication/pdf2422634https://www.arca.fiocruz.br/bitstream/icict/51118/2/MariaAMM_MaresGuia_etal_IOC_2021.pdf2eb0725fce7ee106045c680e5505f0dfMD52icict/511182022-11-29 14:57:39.404oai:www.arca.fiocruz.br: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ório InstitucionalPUBhttps://www.arca.fiocruz.br/oai/requestrepositorio.arca@fiocruz.bropendoar:21352022-11-29T17:57:39Repositório Institucional da FIOCRUZ (ARCA) - 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| dc.title.pt_BR.fl_str_mv |
Real-Time Genomic Surveillance during the 2021 Re-Emergence of the Yellow Fever Virus in Rio Grande do Sul State, Brazil |
| title |
Real-Time Genomic Surveillance during the 2021 Re-Emergence of the Yellow Fever Virus in Rio Grande do Sul State, Brazil |
| spellingShingle |
Real-Time Genomic Surveillance during the 2021 Re-Emergence of the Yellow Fever Virus in Rio Grande do Sul State, Brazil Andrade, Miguel de S. Epizoótica Primatas não humanos Análise filogenética Epizootic Phylogenetic analysis Non-human primates |
| title_short |
Real-Time Genomic Surveillance during the 2021 Re-Emergence of the Yellow Fever Virus in Rio Grande do Sul State, Brazil |
| title_full |
Real-Time Genomic Surveillance during the 2021 Re-Emergence of the Yellow Fever Virus in Rio Grande do Sul State, Brazil |
| title_fullStr |
Real-Time Genomic Surveillance during the 2021 Re-Emergence of the Yellow Fever Virus in Rio Grande do Sul State, Brazil |
| title_full_unstemmed |
Real-Time Genomic Surveillance during the 2021 Re-Emergence of the Yellow Fever Virus in Rio Grande do Sul State, Brazil |
| title_sort |
Real-Time Genomic Surveillance during the 2021 Re-Emergence of the Yellow Fever Virus in Rio Grande do Sul State, Brazil |
| author |
Andrade, Miguel de S. |
| author_facet |
Andrade, Miguel de S. Campos, Fabrício S. Campos, Aline A. S. Abreu, Filipe Vieira Santos de Melo, Fernando L. Sevá, Anaiá da Cardoso, Jader da C. Santos, Edmilson dos Born, Lucas C. Silva, Cláudia M. D. da Müller, Nicolas F. D. Oliveira, Cirilo H. de Silva, Alex J. J. da Simonini-Teixeira, Danilo Valle, Sofía Bernal Mares-Guia, Maria A. M. M. Albuquerque, George R. Romano, Alessandro P. M. Franco, Ana C. Ribeiro, Bergmann M. Roche, Paulo M. Almeida, Marco A. B. de |
| author_role |
author |
| author2 |
Campos, Fabrício S. Campos, Aline A. S. Abreu, Filipe Vieira Santos de Melo, Fernando L. Sevá, Anaiá da Cardoso, Jader da C. Santos, Edmilson dos Born, Lucas C. Silva, Cláudia M. D. da Müller, Nicolas F. D. Oliveira, Cirilo H. de Silva, Alex J. J. da Simonini-Teixeira, Danilo Valle, Sofía Bernal Mares-Guia, Maria A. M. M. Albuquerque, George R. Romano, Alessandro P. M. Franco, Ana C. Ribeiro, Bergmann M. Roche, Paulo M. Almeida, Marco A. B. de |
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author author author author author author author author author author author author author author author author author author author author author |
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Andrade, Miguel de S. Campos, Fabrício S. Campos, Aline A. S. Abreu, Filipe Vieira Santos de Melo, Fernando L. Sevá, Anaiá da Cardoso, Jader da C. Santos, Edmilson dos Born, Lucas C. Silva, Cláudia M. D. da Müller, Nicolas F. D. Oliveira, Cirilo H. de Silva, Alex J. J. da Simonini-Teixeira, Danilo Valle, Sofía Bernal Mares-Guia, Maria A. M. M. Albuquerque, George R. Romano, Alessandro P. M. Franco, Ana C. Ribeiro, Bergmann M. Roche, Paulo M. Almeida, Marco A. B. de |
| dc.subject.other.pt_BR.fl_str_mv |
Epizoótica Primatas não humanos Análise filogenética |
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Epizoótica Primatas não humanos Análise filogenética Epizootic Phylogenetic analysis Non-human primates |
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Epizootic Phylogenetic analysis Non-human primates |
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Universidade de Brasília. Instituto de Ciências Biologicas. Departamento de Biologia Celular. Laboratório de Baculovírus. Brasília, DF, Brasil. |
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2021 |
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2021 |
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2022-02-09T17:37:23Z |
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2022-02-09T17:37:23Z |
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ANDRADE, Miguel de S. et al. Real-Time Genomic Surveillance during the 2021 Re-Emergence of the Yellow Fever Virus in Rio Grande do Sul State, Brazil. Viruses, v. 13, 1976, p. 1 - 12, Oct. 2021. |
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1999-4915 |
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10.3390/v13101976 |
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ANDRADE, Miguel de S. et al. Real-Time Genomic Surveillance during the 2021 Re-Emergence of the Yellow Fever Virus in Rio Grande do Sul State, Brazil. Viruses, v. 13, 1976, p. 1 - 12, Oct. 2021. 1999-4915 10.3390/v13101976 |
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