Detection of caliciviruses associated with acute infantile gastroenteritis in Salvador, an urban center in Northeast Brazil

Detalhes bibliográficos
Autor(a) principal: Xavier, M. P. T. P.
Data de Publicação: 2009
Outros Autores: Oliveira, S. A., Ferreira, M. S. R., Victoria, M., Miranda, V., Silva, M. F. M., Strina, A., Barreto, M. L., Miagostovich, Marize Pereira, Leite, José Paulo Gagliardi
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da FIOCRUZ (ARCA)
Texto Completo: https://www.arca.fiocruz.br/handle/icict/27976
Resumo: Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Virologia. Rio de Janeiro, RJ. Brasil.
id CRUZ_60670b633f547cfc3bca8970d7b8ba22
oai_identifier_str oai:www.arca.fiocruz.br:icict/27976
network_acronym_str CRUZ
network_name_str Repositório Institucional da FIOCRUZ (ARCA)
repository_id_str 2135
spelling Xavier, M. P. T. P.Oliveira, S. A.Ferreira, M. S. R.Victoria, M.Miranda, V.Silva, M. F. M.Strina, A.Barreto, M. L.Miagostovich, Marize PereiraLeite, José Paulo Gagliardi2018-08-07T13:40:38Z2018-08-07T13:40:38Z2009XAVIER, M. P. T. P. et al. Detection of caliciviruses associated with acute infantile gastroenteritis in Salvador, an urban center in Northeast Brazil. 438 Braz J Med Biol Res 42(5) 2009 M.P.T.P. Xavier et al. www.bjournal.com.br Brazilian Journal of Medical and Biological Research, v.42, p 438-444, 2009.0100-879Xhttps://www.arca.fiocruz.br/handle/icict/279761414-431XengAssociação Brasileira de Divulgação CientíficaInfecções por CaliciviridaeSapovirusMamastrovirusRotavirus AGastroenteriteGenótipoCalicivirusSapovirusAstrovirusRotavirus AGastroenteritisGenotypesDetection of caliciviruses associated with acute infantile gastroenteritis in Salvador, an urban center in Northeast Brazilinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleFundação Oswaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Virologia. Rio de Janeiro, RJ. Brasil.Universidade Federal Fluminense. Hospital Universitário Antonio Pedro. Niterói, RJ, Brasil.Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Virologia Comparada. Rio de Janeiro, RJ. Brasil.Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Virologia Comparada. Rio de Janeiro, RJ. Brasil.Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Virologia Comparada. Rio de Janeiro, RJ. Brasil.Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Virologia Comparada. Rio de Janeiro, RJ. Brasil.Universidade Federal da Bahia. Instituto de Saúde Coletiva. Salvador, BA, Brasil.Universidade Federal da Bahia. Instituto de Saúde Coletiva. Salvador, BA, Brasil.Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Virologia Comparda. Rio de Janeiro, RJ. Brasil.Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Virologia Comparada. Rio de Janeiro, RJ. Brasil.Acute gastroenteritis caused by viruses is one of the leading causes of infantile morbidity. The aim of the present study was to investigate the presence of human caliciviruses of the genera norovirus and sapovirus in children up to 3 years of age with acute gastroenteritis from low-income communities in the city of Salvador, Brazil. This study is an extension of previous work carried out to establish the profile of the most prevalent enteric pathogens present in these communities. In this report, 139 fecal samples, collected from July 2001 to January 2002 were analyzed by RT-PCR and 13 (9%) were positive for human caliciviruses. By sequencing, seven isolates were characterized as norovirus genogroup GII and one as sapovirus genotype GII/1. Sequencing of the previously detected group-A rotaviruses and human astroviruses was also performed and revealed the circulation of rotavirus group A genotypes G1P[8] and G9P[8], and human astrovirus genotypes 6, 7, and 8. No mixed infection was observed. Community-based studies provide geographically representative information on disease burden. However, there are only a few reports in developing countries concerning the genotypes of the most important gastroenteric viruses detected in such communities. The present findings demonstrate the wide diversity of genotypes of the most important viruses responsible for acute gastroenteritis circulating in low-income communities.info:eu-repo/semantics/openAccessreponame:Repositório Institucional da FIOCRUZ (ARCA)instname:Fundação Oswaldo Cruz (FIOCRUZ)instacron:FIOCRUZLICENSElicense.txtlicense.txttext/plain; charset=utf-82991https://www.arca.fiocruz.br/bitstream/icict/27976/1/license.txt5a560609d32a3863062d77ff32785d58MD51ORIGINALMPTP_Xavier_etal_IOC_2009.pdfMPTP_Xavier_etal_IOC_2009.pdfapplication/pdf113630https://www.arca.fiocruz.br/bitstream/icict/27976/2/MPTP_Xavier_etal_IOC_2009.pdfefdf0338c77e1e262330bceba84e0b2bMD52TEXTMPTP_Xavier_etal_IOC_2009.pdf.txtMPTP_Xavier_etal_IOC_2009.pdf.txtExtracted texttext/plain28566https://www.arca.fiocruz.br/bitstream/icict/27976/3/MPTP_Xavier_etal_IOC_2009.pdf.txtb5b087f877bc7797e8750020f259f7a1MD53icict/279762018-08-15 03:52:43.3oai:www.arca.fiocruz.br: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ório InstitucionalPUBhttps://www.arca.fiocruz.br/oai/requestrepositorio.arca@fiocruz.bropendoar:21352018-08-15T06:52:43Repositório Institucional da FIOCRUZ (ARCA) - Fundação Oswaldo Cruz (FIOCRUZ)false
dc.title.pt_BR.fl_str_mv Detection of caliciviruses associated with acute infantile gastroenteritis in Salvador, an urban center in Northeast Brazil
title Detection of caliciviruses associated with acute infantile gastroenteritis in Salvador, an urban center in Northeast Brazil
spellingShingle Detection of caliciviruses associated with acute infantile gastroenteritis in Salvador, an urban center in Northeast Brazil
Xavier, M. P. T. P.
Infecções por Caliciviridae
Sapovirus
Mamastrovirus
Rotavirus A
Gastroenterite
Genótipo
Calicivirus
Sapovirus
Astrovirus
Rotavirus A
Gastroenteritis
Genotypes
title_short Detection of caliciviruses associated with acute infantile gastroenteritis in Salvador, an urban center in Northeast Brazil
title_full Detection of caliciviruses associated with acute infantile gastroenteritis in Salvador, an urban center in Northeast Brazil
title_fullStr Detection of caliciviruses associated with acute infantile gastroenteritis in Salvador, an urban center in Northeast Brazil
title_full_unstemmed Detection of caliciviruses associated with acute infantile gastroenteritis in Salvador, an urban center in Northeast Brazil
title_sort Detection of caliciviruses associated with acute infantile gastroenteritis in Salvador, an urban center in Northeast Brazil
author Xavier, M. P. T. P.
author_facet Xavier, M. P. T. P.
Oliveira, S. A.
Ferreira, M. S. R.
Victoria, M.
Miranda, V.
Silva, M. F. M.
Strina, A.
Barreto, M. L.
Miagostovich, Marize Pereira
Leite, José Paulo Gagliardi
author_role author
author2 Oliveira, S. A.
Ferreira, M. S. R.
Victoria, M.
Miranda, V.
Silva, M. F. M.
Strina, A.
Barreto, M. L.
Miagostovich, Marize Pereira
Leite, José Paulo Gagliardi
author2_role author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Xavier, M. P. T. P.
Oliveira, S. A.
Ferreira, M. S. R.
Victoria, M.
Miranda, V.
Silva, M. F. M.
Strina, A.
Barreto, M. L.
Miagostovich, Marize Pereira
Leite, José Paulo Gagliardi
dc.subject.other.pt_BR.fl_str_mv Infecções por Caliciviridae
Sapovirus
Mamastrovirus
Rotavirus A
Gastroenterite
Genótipo
topic Infecções por Caliciviridae
Sapovirus
Mamastrovirus
Rotavirus A
Gastroenterite
Genótipo
Calicivirus
Sapovirus
Astrovirus
Rotavirus A
Gastroenteritis
Genotypes
dc.subject.en.pt_BR.fl_str_mv Calicivirus
Sapovirus
Astrovirus
Rotavirus A
Gastroenteritis
Genotypes
description Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Virologia. Rio de Janeiro, RJ. Brasil.
publishDate 2009
dc.date.issued.fl_str_mv 2009
dc.date.accessioned.fl_str_mv 2018-08-07T13:40:38Z
dc.date.available.fl_str_mv 2018-08-07T13:40:38Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.citation.fl_str_mv XAVIER, M. P. T. P. et al. Detection of caliciviruses associated with acute infantile gastroenteritis in Salvador, an urban center in Northeast Brazil. 438 Braz J Med Biol Res 42(5) 2009 M.P.T.P. Xavier et al. www.bjournal.com.br Brazilian Journal of Medical and Biological Research, v.42, p 438-444, 2009.
dc.identifier.uri.fl_str_mv https://www.arca.fiocruz.br/handle/icict/27976
dc.identifier.issn.pt_BR.fl_str_mv 0100-879X
dc.identifier.eissn.none.fl_str_mv 1414-431X
identifier_str_mv XAVIER, M. P. T. P. et al. Detection of caliciviruses associated with acute infantile gastroenteritis in Salvador, an urban center in Northeast Brazil. 438 Braz J Med Biol Res 42(5) 2009 M.P.T.P. Xavier et al. www.bjournal.com.br Brazilian Journal of Medical and Biological Research, v.42, p 438-444, 2009.
0100-879X
1414-431X
url https://www.arca.fiocruz.br/handle/icict/27976
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Associação Brasileira de Divulgação Científica
publisher.none.fl_str_mv Associação Brasileira de Divulgação Científica
dc.source.none.fl_str_mv reponame:Repositório Institucional da FIOCRUZ (ARCA)
instname:Fundação Oswaldo Cruz (FIOCRUZ)
instacron:FIOCRUZ
instname_str Fundação Oswaldo Cruz (FIOCRUZ)
instacron_str FIOCRUZ
institution FIOCRUZ
reponame_str Repositório Institucional da FIOCRUZ (ARCA)
collection Repositório Institucional da FIOCRUZ (ARCA)
bitstream.url.fl_str_mv https://www.arca.fiocruz.br/bitstream/icict/27976/1/license.txt
https://www.arca.fiocruz.br/bitstream/icict/27976/2/MPTP_Xavier_etal_IOC_2009.pdf
https://www.arca.fiocruz.br/bitstream/icict/27976/3/MPTP_Xavier_etal_IOC_2009.pdf.txt
bitstream.checksum.fl_str_mv 5a560609d32a3863062d77ff32785d58
efdf0338c77e1e262330bceba84e0b2b
b5b087f877bc7797e8750020f259f7a1
bitstream.checksumAlgorithm.fl_str_mv MD5
MD5
MD5
repository.name.fl_str_mv Repositório Institucional da FIOCRUZ (ARCA) - Fundação Oswaldo Cruz (FIOCRUZ)
repository.mail.fl_str_mv repositorio.arca@fiocruz.br
_version_ 1798324839014989824