Short report: Introduction of chikungunya virus ECSA genotype into the Brazilian Midwest and its dispersion through the Americas
| Autor(a) principal: | |
|---|---|
| Data de Publicação: | 2021 |
| Outros Autores: | , , , , , , , , , , , , , , , , , , , , |
| Tipo de documento: | Artigo |
| Idioma: | eng |
| Título da fonte: | Repositório Institucional da FIOCRUZ (ARCA) |
| Texto Completo: | https://www.arca.fiocruz.br/handle/icict/48761 |
Resumo: | Laboratório Central de Saúde Pública do Estado de Mato Grosso. Cuiaba, MT, Brasil. |
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Oliveira, Elaine Cristina deFonseca, VagnerXavier, JoilsonAdelino, Talita Émile RibeiroClaro, Inga MoralesFabri, AllisonMacario, Eduardo MarquesViniski, Ana ElisaSouza, Claudio Luis CamposCosta, Evanil Sebastiana Gomes daSousa, Claudia Soares deDuarte, Flávia Guimarães DiasMedeiros, Arnaldo Correia deMelo, Carlos Frederico Campelo de Albuquerque eCunha, Rivaldo VenancioMoura, Noely Fabiana Oliveira deFilippis, Ana Maria Bispo deOliveira, Tulio deLourenço, JoséAbreu, Andre Luiz deAlcantara, Luis Carlos JuniorGiovanetti, Marta2021-08-26T13:28:24Z2021-08-26T13:28:24Z2021OLIVEIRA, Elaine Cristina de et al. Short report: Introduction of chikungunya virus ECSA genotype into the Brazilian Midwest and its dispersion through the Americas. Plos NeglTrop Dis, v. 15, n. 4, e0009290, Apr. 2021.1935-2727https://www.arca.fiocruz.br/handle/icict/4876110.1371/journal.pntd.00092901935-2735engPublic Library of ScienceChikungunyaGenótipovirus ECSADispersão atráves AméricaChikungunya virus ECSAGenotypeBrazilian MidwestDispersionThrough AmericaShort report: Introduction of chikungunya virus ECSA genotype into the Brazilian Midwest and its dispersion through the Americasinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleLaboratório Central de Saúde Pública do Estado de Mato Grosso. Cuiaba, MT, Brasil.Universidade Federal de Minas Gerais. Laboratóio de Genética Celular e Molecular. Belo Horizonte, MG, Brasil / KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), College of Health Sciences, University of KwaZuluNatal, Durban 4001, South Africa / Ministério da Saúde. Secretaria de Vigilância em Saúde. Coordenação Geral dos Laboratórios de Saúde Pública. Brasíllia, DF, BrasilUniversidade Federal de Minas Gerais. Laboratóio de Genética Celular e Molecular. Belo Horizonte, MG, Brasil.Universidade de São Paulo. Faculdade de Medicina. Instituto de Medicina Tropical. São Paulo, SP, Brasil.Universidade de São Paulo. Faculdade de Medicina. Instituto de Medicina Tropical. São Paulo, SP, Brasil.Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Flavivírus. Rio de Janeiro, RJ, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Brasília, DF, Brasil.Laboratório Central de Saúde Pública do Estado de Mato Grosso. Cuiaba, MT, Brasil.Laboratório Central de Saúde Pública do Estado de Mato Grosso. Cuiaba, MT, Brasil.Secretaria de Saúde de Cuiaba. MT Brasil.Secretaria de Saúde de Cuiaba. MT Brasil.Secretaria de Saúde de Cuiaba. MT Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Brasília, DF, Brasil.Organização Pan-Americana da Saúde/ Organização Mundial da Saúde. Brasília, DF, Brasil.Fundação Oswaldo Cruz. Bio-Manguinhos. Rio de Janeiro, RJ, Brasil.Ministério da Saúde.. Coordenação Geral de Arboviroses. Brasíllia, DF, Brasil.Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Flavivírus. Rio de Janeiro, RJ, Brasil.KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), College of Health Sciences, University of KwaZuluNatal. Durban 4001, South AfricaUniversity of Oxford. Department of Zoology. Oxford, UK.Ministério da Saúde.Coordenação Geral dos Laboratórios de Saúde Pública / Secretaria de Vigilância em Saúde. Brasília, DF, Brasil.Universidade Federal de Minas Gerais. Laboratóio de Genética Celular e Molecular. Belo Horizonte, MG, Brasil / Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Flavivírus. Rio de Janeiro, RJ, Brasil..Universidade Federal de Minas Gerais. Laboratóio de Genética Celular e Molecular. Belo Horizonte, MG, Brasil / Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Flavivírus. Rio de Janeiro, RJ, Brasil.Since introduction into Brazil in 2014, chikungunya virus (CHIKV) has presented sustained transmission, although much is unknown about its circulation in the midwestern states. Here, we analyze 24 novel partial and near complete CHIKV genomes from Cuiaba, an urban metropolis located in the Brazilian midwestern state of Mato Grosso (MT). Nanopore technology was used for sequencing CHIKV complete genomes. Phylogenetic and epidemiological approaches were used to explore the recent spatio-temporal evolution and spread of the CHIKV-ECSA genotype in Midwest Brazil as well as in the Americas. Epidemiological data revealed a reduction in the number of reported cases over 2018– 2020, likely as a consequence of a gradual accumulation of herd-immunity. Phylogeo graphic reconstructions revealed that at least two independent introductions of the ECSA lineage occurred in MT from a dispersion event originating in the northeastern region and suggest that the midwestern Brazilian region appears to have acted as a source of virus transmission towards Paraguay, a bordering South American country. Since introduction into Brazil in 2014, chikungunya virus (CHIKV) has presented sustained transmission, although much is unknown about its circulation in the midwestern states. Here, we analyze 24 novel partial and near complete CHIKV genomes from Cuiaba, an urban metropolis located in the Brazilian midwestern state of Mato Grosso (MT). Nanopore technology was used for sequencing CHIKV complete genomes. Phylogenetic and epidemiological approaches were used to explore the recent spatio-temporal evolution and spread of the CHIKV-ECSA genotype in Midwest Brazil as well as in the Americas. Epidemiological data revealed a reduction in the number of reported cases over 2018– 2020, likely as a consequence of a gradual accumulation of herd-immunity. Phylogeo graphic reconstructions revealed that at least two independent introductions of the ECSA lineage occurred in MT from a dispersion event originating in the northeastern region and suggest that the midwestern Brazilian region appears to have acted as a source of virus transmission towards Paraguay, a bordering South American country.Since introduction into Brazil in 2014, chikungunya virus (CHIKV) has presented sustained transmission, although much is unknown about its circulation in the midwestern states. Here, we analyze 24 novel partial and near complete CHIKV genomes from Cuiaba, an urban metropolis located in the Brazilian midwestern state of Mato Grosso (MT). Nanopore technology was used for sequencing CHIKV complete genomes. Phylogenetic and epidemiological approaches were used to explore the recent spatio-temporal evolution and spread of the CHIKV-ECSA genotype in Midwest Brazil as well as in the Americas. Epidemiological data revealed a reduction in the number of reported cases over 2018– 2020, likely as a consequence of a gradual accumulation of herd-immunity. Phylogeo graphic reconstructions revealed that at least two independent introductions of the ECSA lineage occurred in MT from a dispersion event originating in the northeastern region and suggest that the midwestern Brazilian region appears to have acted as a source of virus transmission towards Paraguay, a bordering South American country. Our results show a complex dynamic of transmission between epidemic seasons and suggest a possible role of Brazil as a source for international dispersion of the CHIKV-ECSA genotype to other countries in the Americas.info:eu-repo/semantics/openAccessreponame:Repositório Institucional da FIOCRUZ (ARCA)instname:Fundação Oswaldo Cruz (FIOCRUZ)instacron:FIOCRUZLICENSElicense.txtlicense.txttext/plain; charset=utf-82991https://www.arca.fiocruz.br/bitstream/icict/48761/1/license.txt5a560609d32a3863062d77ff32785d58MD51ORIGINALANaMBFilipis_LuizCAlcantara_etal_IOC_2021.pdfANaMBFilipis_LuizCAlcantara_etal_IOC_2021.pdfapplication/pdf1012293https://www.arca.fiocruz.br/bitstream/icict/48761/2/ANaMBFilipis_LuizCAlcantara_etal_IOC_2021.pdf4919199c520b564e708f85057bb97ee6MD52TEXTANaMBFilipis_LuizCAlcantara_etal_IOC_2021.pdf.txtANaMBFilipis_LuizCAlcantara_etal_IOC_2021.pdf.txtExtracted 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| dc.title.pt_BR.fl_str_mv |
Short report: Introduction of chikungunya virus ECSA genotype into the Brazilian Midwest and its dispersion through the Americas |
| title |
Short report: Introduction of chikungunya virus ECSA genotype into the Brazilian Midwest and its dispersion through the Americas |
| spellingShingle |
Short report: Introduction of chikungunya virus ECSA genotype into the Brazilian Midwest and its dispersion through the Americas Oliveira, Elaine Cristina de Chikungunya Genótipo virus ECSA Dispersão atráves América Chikungunya virus ECSA Genotype Brazilian Midwest Dispersion Through America |
| title_short |
Short report: Introduction of chikungunya virus ECSA genotype into the Brazilian Midwest and its dispersion through the Americas |
| title_full |
Short report: Introduction of chikungunya virus ECSA genotype into the Brazilian Midwest and its dispersion through the Americas |
| title_fullStr |
Short report: Introduction of chikungunya virus ECSA genotype into the Brazilian Midwest and its dispersion through the Americas |
| title_full_unstemmed |
Short report: Introduction of chikungunya virus ECSA genotype into the Brazilian Midwest and its dispersion through the Americas |
| title_sort |
Short report: Introduction of chikungunya virus ECSA genotype into the Brazilian Midwest and its dispersion through the Americas |
| author |
Oliveira, Elaine Cristina de |
| author_facet |
Oliveira, Elaine Cristina de Fonseca, Vagner Xavier, Joilson Adelino, Talita Émile Ribeiro Claro, Inga Morales Fabri, Allison Macario, Eduardo Marques Viniski, Ana Elisa Souza, Claudio Luis Campos Costa, Evanil Sebastiana Gomes da Sousa, Claudia Soares de Duarte, Flávia Guimarães Dias Medeiros, Arnaldo Correia de Melo, Carlos Frederico Campelo de Albuquerque e Cunha, Rivaldo Venancio Moura, Noely Fabiana Oliveira de Filippis, Ana Maria Bispo de Oliveira, Tulio de Lourenço, José Abreu, Andre Luiz de Alcantara, Luis Carlos Junior Giovanetti, Marta |
| author_role |
author |
| author2 |
Fonseca, Vagner Xavier, Joilson Adelino, Talita Émile Ribeiro Claro, Inga Morales Fabri, Allison Macario, Eduardo Marques Viniski, Ana Elisa Souza, Claudio Luis Campos Costa, Evanil Sebastiana Gomes da Sousa, Claudia Soares de Duarte, Flávia Guimarães Dias Medeiros, Arnaldo Correia de Melo, Carlos Frederico Campelo de Albuquerque e Cunha, Rivaldo Venancio Moura, Noely Fabiana Oliveira de Filippis, Ana Maria Bispo de Oliveira, Tulio de Lourenço, José Abreu, Andre Luiz de Alcantara, Luis Carlos Junior Giovanetti, Marta |
| author2_role |
author author author author author author author author author author author author author author author author author author author author author |
| dc.contributor.author.fl_str_mv |
Oliveira, Elaine Cristina de Fonseca, Vagner Xavier, Joilson Adelino, Talita Émile Ribeiro Claro, Inga Morales Fabri, Allison Macario, Eduardo Marques Viniski, Ana Elisa Souza, Claudio Luis Campos Costa, Evanil Sebastiana Gomes da Sousa, Claudia Soares de Duarte, Flávia Guimarães Dias Medeiros, Arnaldo Correia de Melo, Carlos Frederico Campelo de Albuquerque e Cunha, Rivaldo Venancio Moura, Noely Fabiana Oliveira de Filippis, Ana Maria Bispo de Oliveira, Tulio de Lourenço, José Abreu, Andre Luiz de Alcantara, Luis Carlos Junior Giovanetti, Marta |
| dc.subject.other.pt_BR.fl_str_mv |
Chikungunya Genótipo virus ECSA Dispersão atráves América |
| topic |
Chikungunya Genótipo virus ECSA Dispersão atráves América Chikungunya virus ECSA Genotype Brazilian Midwest Dispersion Through America |
| dc.subject.en.pt_BR.fl_str_mv |
Chikungunya virus ECSA Genotype Brazilian Midwest Dispersion Through America |
| description |
Laboratório Central de Saúde Pública do Estado de Mato Grosso. Cuiaba, MT, Brasil. |
| publishDate |
2021 |
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2021-08-26T13:28:24Z |
| dc.date.available.fl_str_mv |
2021-08-26T13:28:24Z |
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2021 |
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info:eu-repo/semantics/publishedVersion |
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info:eu-repo/semantics/article |
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article |
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publishedVersion |
| dc.identifier.citation.fl_str_mv |
OLIVEIRA, Elaine Cristina de et al. Short report: Introduction of chikungunya virus ECSA genotype into the Brazilian Midwest and its dispersion through the Americas. Plos NeglTrop Dis, v. 15, n. 4, e0009290, Apr. 2021. |
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https://www.arca.fiocruz.br/handle/icict/48761 |
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1935-2727 |
| dc.identifier.doi.none.fl_str_mv |
10.1371/journal.pntd.0009290 |
| dc.identifier.eissn.none.fl_str_mv |
1935-2735 |
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OLIVEIRA, Elaine Cristina de et al. Short report: Introduction of chikungunya virus ECSA genotype into the Brazilian Midwest and its dispersion through the Americas. Plos NeglTrop Dis, v. 15, n. 4, e0009290, Apr. 2021. 1935-2727 10.1371/journal.pntd.0009290 1935-2735 |
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https://www.arca.fiocruz.br/handle/icict/48761 |
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