Squid - a simple bioinformatics grid

Carvalho, Paulo C,; Glória, Rafael V,; Miranda, Antonio B, de; Degrave, Wim M.

Squid - a simple bioinformatics grid

Detalhes bibliográficos
Autor(a) principal:	Carvalho, Paulo C
Data de Publicação:	2005
Outros Autores:	Glória, Rafael V, Miranda, Antonio B, de, Degrave, Wim M.
Tipo de documento:	Artigo
Idioma:	eng
Título da fonte:	Repositório Institucional da FIOCRUZ (ARCA)
Texto Completo:	https://www.arca.fiocruz.br/handle/icict/37639
Resumo:	Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Genômica Funcional e Bioinformática. Rio de Janeiro, RJ, Brasil.

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spelling	Carvalho, Paulo C,Glória, Rafael V,Miranda, Antonio B, deDegrave, Wim M.2019-12-05T13:48:12Z2019-12-05T13:48:12Z2005CARVALHO, Paulo C. et al. Squid - a simple bioinformatics grid. BMC Bioinformatics, v. 6, n. 197, p. 1-4, 2005.1471-2105https://www.arca.fiocruz.br/handle/icict/3763910.1186/1471-2105-6-197engBioMed CentralBioinformáticaBLASTBLASTBioinformaticsSquid - a simple bioinformatics gridinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleFundação Oswaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Genômica Funcional e Bioinformática. Rio de Janeiro, RJ, Brasil.Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Genômica Funcional e Bioinformática. Rio de Janeiro, RJ, Brasil.Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Genômica Funcional e Bioinformática. Rio de Janeiro, RJ, Brasil.Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Genômica Funcional e Bioinformática. Rio de Janeiro, RJ, Brasil.BLAST is a widely used genetic research tool for analysis of similarity between nucleotide and protein sequences. This paper presents a software application entitled "Squid" that makes use of grid technology. The current version, as an example, is configured for BLAST applications, but adaptation for other computing intensive repetitive tasks can be easily accomplished in the open source version. This enables the allocation of remote resources to perform distributed computing, making large BLAST queries viable without the need of high-end computers.info:eu-repo/semantics/openAccessreponame:Repositório Institucional da FIOCRUZ (ARCA)instname:Fundação Oswaldo Cruz (FIOCRUZ)instacron:FIOCRUZLICENSElicense.txtlicense.txttext/plain; charset=utf-82991https://www.arca.fiocruz.br/bitstream/icict/37639/1/license.txt5a560609d32a3863062d77ff32785d58MD51ORIGINALRafaelGloria_AntonioMiranda_etal_IOC_2005.pdfRafaelGloria_AntonioMiranda_etal_IOC_2005.pdfapplication/pdf161061https://www.arca.fiocruz.br/bitstream/icict/37639/2/RafaelGloria_AntonioMiranda_etal_IOC_2005.pdf51e735003940200bd29e17eee958fe06MD52TEXTRafaelGloria_AntonioMiranda_etal_IOC_2005.pdf.txtRafaelGloria_AntonioMiranda_etal_IOC_2005.pdf.txtExtracted texttext/plain15585https://www.arca.fiocruz.br/bitstream/icict/37639/3/RafaelGloria_AntonioMiranda_etal_IOC_2005.pdf.txt455504f86164b0fa62614d771d90061bMD53icict/376392019-12-06 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dc.title.pt_BR.fl_str_mv	Squid - a simple bioinformatics grid
title	Squid - a simple bioinformatics grid
spellingShingle	Squid - a simple bioinformatics grid Carvalho, Paulo C, Bioinformática BLAST BLAST Bioinformatics
title_short	Squid - a simple bioinformatics grid
title_full	Squid - a simple bioinformatics grid
title_fullStr	Squid - a simple bioinformatics grid
title_full_unstemmed	Squid - a simple bioinformatics grid
title_sort	Squid - a simple bioinformatics grid
author	Carvalho, Paulo C,
author_facet	Carvalho, Paulo C, Glória, Rafael V, Miranda, Antonio B, de Degrave, Wim M.
author_role	author
author2	Glória, Rafael V, Miranda, Antonio B, de Degrave, Wim M.
author2_role	author author author
dc.contributor.author.fl_str_mv	Carvalho, Paulo C, Glória, Rafael V, Miranda, Antonio B, de Degrave, Wim M.
dc.subject.other.pt_BR.fl_str_mv	Bioinformática BLAST
topic	Bioinformática BLAST BLAST Bioinformatics
dc.subject.en.pt_BR.fl_str_mv	BLAST Bioinformatics
description	Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Genômica Funcional e Bioinformática. Rio de Janeiro, RJ, Brasil.
publishDate	2005
dc.date.issued.fl_str_mv	2005
dc.date.accessioned.fl_str_mv	2019-12-05T13:48:12Z
dc.date.available.fl_str_mv	2019-12-05T13:48:12Z
dc.type.status.fl_str_mv	info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv	info:eu-repo/semantics/article
format	article
status_str	publishedVersion
dc.identifier.citation.fl_str_mv	CARVALHO, Paulo C. et al. Squid - a simple bioinformatics grid. BMC Bioinformatics, v. 6, n. 197, p. 1-4, 2005.
dc.identifier.uri.fl_str_mv	https://www.arca.fiocruz.br/handle/icict/37639
dc.identifier.issn.pt_BR.fl_str_mv	1471-2105
dc.identifier.doi.none.fl_str_mv	10.1186/1471-2105-6-197
identifier_str_mv	CARVALHO, Paulo C. et al. Squid - a simple bioinformatics grid. BMC Bioinformatics, v. 6, n. 197, p. 1-4, 2005. 1471-2105 10.1186/1471-2105-6-197
url	https://www.arca.fiocruz.br/handle/icict/37639
dc.language.iso.fl_str_mv	eng
language	eng
dc.rights.driver.fl_str_mv	info:eu-repo/semantics/openAccess
eu_rights_str_mv	openAccess
dc.publisher.none.fl_str_mv	BioMed Central
publisher.none.fl_str_mv	BioMed Central
dc.source.none.fl_str_mv	reponame:Repositório Institucional da FIOCRUZ (ARCA) instname:Fundação Oswaldo Cruz (FIOCRUZ) instacron:FIOCRUZ
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Squid - a simple bioinformatics grid

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