Phylogenetics applied to the human immunodeficiency virus type 1 (HIV-1): from the cross-species transmissions to the contact network inferences
Autor(a) principal: | |
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Data de Publicação: | 2020 |
Outros Autores: | , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da FIOCRUZ (ARCA) |
Texto Completo: | https://www.arca.fiocruz.br/handle/icict/40431 |
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Gräf, TiagoDelatorre, EdsonBello, Gonzalo2020-03-20T18:10:38Z2020-03-20T18:10:38Z2020GRÄF, Tiago; DELATORRE, Edson; BELLO, Gonzalo. Phylogenetics applied to the human immunodeficiency virus type 1 (HIV-1): from the cross-species transmissions to the contact network inferences. Memórias do Instituto Oswaldo Cruz, v. 115, n. e190461, p. 1-5, 2020.0074-0276https://www.arca.fiocruz.br/handle/icict/4043110.1590/0074-027601904611678-8060CNPqFAPERJFundação Oswaldo Cruz. Instituto Gonçalo Moniz. Salvador, BA, Brasil.Universidade Federal do Espírito Santo. Centro de Ciências Exatas, Naturais e da Saúde. Departamento de Biologia. Alegre, ES, Brasil.Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Laboratório de AIDS e Imunologia Molecular. Rio de Janeiro, RJ, Brasil.Phylogenetic analyses were crucial to elucidate the origin and spread of the pandemic human immunodeficiency virus type 1 (HIV-1) group M virus, both during the pre-epidemic period of cryptic dissemination in human populations as well as during the epidemic phase of spread. The use of phylogenetics and phylodynamics approaches has provided important insights to track the founder events that resulted in the spread of HIV-1 strains across vast geographic areas, specific countries and within geographically restricted communities. In the recent years, the use of phylogenetic analysis combined with the huge availability of HIV sequences has become an increasingly important approach to reconstruct HIV transmission networks and understand transmission dynamics in concentrated and generalised epidemics. Significant efforts to obtain viral sequences from newly HIV-infected individuals could certainly contribute to detect rapidly expanding HIV-1 lineages, identify key populations at high-risk and understand what public health interventions should be prioritised in different scenarios.engInstituto Oswaldo Cruz, Ministério da SaúdeHIV-1FilogenéticaFilogeografiaClusters de transmissãoHIV-1PhylogeneticsPhylogeographyTransmission clustersPhylogenetics applied to the human immunodeficiency virus type 1 (HIV-1): from the cross-species transmissions to the contact network inferencesinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da FIOCRUZ (ARCA)instname:Fundação Oswaldo Cruz (FIOCRUZ)instacron:FIOCRUZLICENSElicense.txtlicense.txttext/plain; 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dc.title.en_US.fl_str_mv |
Phylogenetics applied to the human immunodeficiency virus type 1 (HIV-1): from the cross-species transmissions to the contact network inferences |
title |
Phylogenetics applied to the human immunodeficiency virus type 1 (HIV-1): from the cross-species transmissions to the contact network inferences |
spellingShingle |
Phylogenetics applied to the human immunodeficiency virus type 1 (HIV-1): from the cross-species transmissions to the contact network inferences Gräf, Tiago HIV-1 Filogenética Filogeografia Clusters de transmissão HIV-1 Phylogenetics Phylogeography Transmission clusters |
title_short |
Phylogenetics applied to the human immunodeficiency virus type 1 (HIV-1): from the cross-species transmissions to the contact network inferences |
title_full |
Phylogenetics applied to the human immunodeficiency virus type 1 (HIV-1): from the cross-species transmissions to the contact network inferences |
title_fullStr |
Phylogenetics applied to the human immunodeficiency virus type 1 (HIV-1): from the cross-species transmissions to the contact network inferences |
title_full_unstemmed |
Phylogenetics applied to the human immunodeficiency virus type 1 (HIV-1): from the cross-species transmissions to the contact network inferences |
title_sort |
Phylogenetics applied to the human immunodeficiency virus type 1 (HIV-1): from the cross-species transmissions to the contact network inferences |
author |
Gräf, Tiago |
author_facet |
Gräf, Tiago Delatorre, Edson Bello, Gonzalo |
author_role |
author |
author2 |
Delatorre, Edson Bello, Gonzalo |
author2_role |
author author |
dc.contributor.author.fl_str_mv |
Gräf, Tiago Delatorre, Edson Bello, Gonzalo |
dc.subject.other.pt_BR.fl_str_mv |
HIV-1 Filogenética Filogeografia Clusters de transmissão |
topic |
HIV-1 Filogenética Filogeografia Clusters de transmissão HIV-1 Phylogenetics Phylogeography Transmission clusters |
dc.subject.en.en_US.fl_str_mv |
HIV-1 Phylogenetics Phylogeography Transmission clusters |
description |
CNPq |
publishDate |
2020 |
dc.date.accessioned.fl_str_mv |
2020-03-20T18:10:38Z |
dc.date.available.fl_str_mv |
2020-03-20T18:10:38Z |
dc.date.issued.fl_str_mv |
2020 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.citation.fl_str_mv |
GRÄF, Tiago; DELATORRE, Edson; BELLO, Gonzalo. Phylogenetics applied to the human immunodeficiency virus type 1 (HIV-1): from the cross-species transmissions to the contact network inferences. Memórias do Instituto Oswaldo Cruz, v. 115, n. e190461, p. 1-5, 2020. |
dc.identifier.uri.fl_str_mv |
https://www.arca.fiocruz.br/handle/icict/40431 |
dc.identifier.issn.pt_BR.fl_str_mv |
0074-0276 |
dc.identifier.doi.pt_BR.fl_str_mv |
10.1590/0074-02760190461 |
dc.identifier.eissn.pt_BR.fl_str_mv |
1678-8060 |
identifier_str_mv |
GRÄF, Tiago; DELATORRE, Edson; BELLO, Gonzalo. Phylogenetics applied to the human immunodeficiency virus type 1 (HIV-1): from the cross-species transmissions to the contact network inferences. Memórias do Instituto Oswaldo Cruz, v. 115, n. e190461, p. 1-5, 2020. 0074-0276 10.1590/0074-02760190461 1678-8060 |
url |
https://www.arca.fiocruz.br/handle/icict/40431 |
dc.language.iso.fl_str_mv |
eng |
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eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
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openAccess |
dc.publisher.none.fl_str_mv |
Instituto Oswaldo Cruz, Ministério da Saúde |
publisher.none.fl_str_mv |
Instituto Oswaldo Cruz, Ministério da Saúde |
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