QTL mapping for protein content in soybean cultivated in two tropical environments

Detalhes bibliográficos
Autor(a) principal: Soares, Taís Cristina Bastos
Data de Publicação: 2008
Outros Autores: Good-God, Pedro Ivo Vieira, Miranda, Fábio Demolinari de, Soares, Yaska Janaína Bastos, Schuster, Ivan, Piovesan, Newton Deniz, Barros, Everaldo Gonçalves de, Moreira, Maurilio Alves
Tipo de documento: Artigo
Idioma: por
Título da fonte: Pesquisa Agropecuária Brasileira (Online)
Texto Completo: https://seer.sct.embrapa.br/index.php/pab/article/view/1080
Resumo: The objectives of this study were to detect quantitative trait loci (QTL) for protein content in soybean grown in two distinct tropical environments and to build a genetic map for protein content. One hundred eighteen soybean recombinant inbred lines (RIL), obtained from a cross between cultivars BARC 8 and Garimpo, were used. The RIL were cultivated in two distinct Brazilian tropical environments: Cascavel county, in Paraná, and Viçosa county, in Minas Gerais (24º57'S, 53º27'W and 20º45'S, 42º52'W, respectively). Sixty-six SSR primer pairs and 65 RAPD primers were polymorphic and segregated at a 1:1 proportion. Thirty poorly saturated linkage groups were obtained, with 90 markers and 41 nonlinked markers. For the lines cultivated in Cascavel, three QTL were mapped in C2, E and N linkage groups, which explained 14.37, 10.31 and 7.34% of the phenotypic variation of protein content, respectively. For the lines cultivated in Viçosa, two QTL were mapped in linkage groups G and #1, which explained 9.51 and 7.34% of the phenotypic variation of protein content. Based on the mean of the two environments, two QTL were identified: one in the linkage group E (9.90%) and other in the group L (7.11%). In order for future studies to consistently detect QTL effects of different environments, genotypes with greater stability should be used.
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spelling QTL mapping for protein content in soybean cultivated in two tropical environmentsMapeamento de QTL quanto ao conteúdo de proteína em soja cultivada em dois ambientes tropicaisGlycine max; linkage map; molecular markers; recombinant inbred lines; quantitative trait lociGlycine max; mapa de ligação; marcador molecular; linhagem recombinante endogâmica; locos de características quantitativasThe objectives of this study were to detect quantitative trait loci (QTL) for protein content in soybean grown in two distinct tropical environments and to build a genetic map for protein content. One hundred eighteen soybean recombinant inbred lines (RIL), obtained from a cross between cultivars BARC 8 and Garimpo, were used. The RIL were cultivated in two distinct Brazilian tropical environments: Cascavel county, in Paraná, and Viçosa county, in Minas Gerais (24º57'S, 53º27'W and 20º45'S, 42º52'W, respectively). Sixty-six SSR primer pairs and 65 RAPD primers were polymorphic and segregated at a 1:1 proportion. Thirty poorly saturated linkage groups were obtained, with 90 markers and 41 nonlinked markers. For the lines cultivated in Cascavel, three QTL were mapped in C2, E and N linkage groups, which explained 14.37, 10.31 and 7.34% of the phenotypic variation of protein content, respectively. For the lines cultivated in Viçosa, two QTL were mapped in linkage groups G and #1, which explained 9.51 and 7.34% of the phenotypic variation of protein content. Based on the mean of the two environments, two QTL were identified: one in the linkage group E (9.90%) and other in the group L (7.11%). In order for future studies to consistently detect QTL effects of different environments, genotypes with greater stability should be used.Os objetivos deste trabalho foram detectar QTL relativos ao conteúdo de proteína, em soja cultivada em dois ambientes tropicais divergentes, e construir um mapa genético para o conteúdo de proteína em genótipos adaptados a condições tropicais. Foram usadas 118 linhagens recombinantes endogâmicas de soja, obtidas do cruzamento entre as cultivares BARC 8 e Garimpo. A população de linhagens recombinantes endogâmicas foi cultivada em dois ambientes contrastantes: Cascavel, PR, e Viçosa, MG (24º57'S, 53º27'W; e 20º45'S, 42º52'W, respectivamente). Sessenta e seis pares de iniciadores SSR e 65 iniciadores RAPD apresentaram fragmentos polimórficos que segregaram à proporção de 1:1. Foram obtidos 30 grupos de ligação pouco saturados, com 90 marcadores, além de 41 marcas não ligadas. Para as famílias cultivadas em Cascavel, três QTL foram mapeados nos grupos de ligação C2, E, e N, que explicaram 14,37, 10,31 e 7,34% da variação fenotípica do conteúdo de proteína, respectivamente. Para as famílias cultivadas em Viçosa, dois QTL foram mapeados nos grupos de ligação G e #1, que explicaram 9,51 e 7,34% da variação fenotípica do conteúdo de proteína. Com base na média dos dois ambientes, dois QTL foram identificados: um no grupo de ligação E (9,90%) e outro no grupo L (7,11%). Genótipos com maior estabilidade devem ser uados em trabalhos futuros, para a detecção de QTL com efeitos consistentes, em diferentes ambientes.Pesquisa Agropecuaria BrasileiraPesquisa Agropecuária BrasileiraCAPES e CNPqSoares, Taís Cristina BastosGood-God, Pedro Ivo VieiraMiranda, Fábio Demolinari deSoares, Yaska Janaína BastosSchuster, IvanPiovesan, Newton DenizBarros, Everaldo Gonçalves deMoreira, Maurilio Alves2008-12-11info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://seer.sct.embrapa.br/index.php/pab/article/view/1080Pesquisa Agropecuaria Brasileira; v.43, n.11, nov. 2008; 1533-1541Pesquisa Agropecuária Brasileira; v.43, n.11, nov. 2008; 1533-15411678-39210100-104xreponame:Pesquisa Agropecuária Brasileira (Online)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPAporhttps://seer.sct.embrapa.br/index.php/pab/article/view/1080/5554https://seer.sct.embrapa.br/index.php/pab/article/downloadSuppFile/1080/720info:eu-repo/semantics/openAccess2012-06-17T11:45:09Zoai:ojs.seer.sct.embrapa.br:article/1080Revistahttp://seer.sct.embrapa.br/index.php/pabPRIhttps://old.scielo.br/oai/scielo-oai.phppab@sct.embrapa.br || sct.pab@embrapa.br1678-39210100-204Xopendoar:2012-06-17T11:45:09Pesquisa Agropecuária Brasileira (Online) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv QTL mapping for protein content in soybean cultivated in two tropical environments
Mapeamento de QTL quanto ao conteúdo de proteína em soja cultivada em dois ambientes tropicais
title QTL mapping for protein content in soybean cultivated in two tropical environments
spellingShingle QTL mapping for protein content in soybean cultivated in two tropical environments
Soares, Taís Cristina Bastos
Glycine max; linkage map; molecular markers; recombinant inbred lines; quantitative trait loci
Glycine max; mapa de ligação; marcador molecular; linhagem recombinante endogâmica; locos de características quantitativas
title_short QTL mapping for protein content in soybean cultivated in two tropical environments
title_full QTL mapping for protein content in soybean cultivated in two tropical environments
title_fullStr QTL mapping for protein content in soybean cultivated in two tropical environments
title_full_unstemmed QTL mapping for protein content in soybean cultivated in two tropical environments
title_sort QTL mapping for protein content in soybean cultivated in two tropical environments
author Soares, Taís Cristina Bastos
author_facet Soares, Taís Cristina Bastos
Good-God, Pedro Ivo Vieira
Miranda, Fábio Demolinari de
Soares, Yaska Janaína Bastos
Schuster, Ivan
Piovesan, Newton Deniz
Barros, Everaldo Gonçalves de
Moreira, Maurilio Alves
author_role author
author2 Good-God, Pedro Ivo Vieira
Miranda, Fábio Demolinari de
Soares, Yaska Janaína Bastos
Schuster, Ivan
Piovesan, Newton Deniz
Barros, Everaldo Gonçalves de
Moreira, Maurilio Alves
author2_role author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv
CAPES e CNPq
dc.contributor.author.fl_str_mv Soares, Taís Cristina Bastos
Good-God, Pedro Ivo Vieira
Miranda, Fábio Demolinari de
Soares, Yaska Janaína Bastos
Schuster, Ivan
Piovesan, Newton Deniz
Barros, Everaldo Gonçalves de
Moreira, Maurilio Alves
dc.subject.por.fl_str_mv Glycine max; linkage map; molecular markers; recombinant inbred lines; quantitative trait loci
Glycine max; mapa de ligação; marcador molecular; linhagem recombinante endogâmica; locos de características quantitativas
topic Glycine max; linkage map; molecular markers; recombinant inbred lines; quantitative trait loci
Glycine max; mapa de ligação; marcador molecular; linhagem recombinante endogâmica; locos de características quantitativas
description The objectives of this study were to detect quantitative trait loci (QTL) for protein content in soybean grown in two distinct tropical environments and to build a genetic map for protein content. One hundred eighteen soybean recombinant inbred lines (RIL), obtained from a cross between cultivars BARC 8 and Garimpo, were used. The RIL were cultivated in two distinct Brazilian tropical environments: Cascavel county, in Paraná, and Viçosa county, in Minas Gerais (24º57'S, 53º27'W and 20º45'S, 42º52'W, respectively). Sixty-six SSR primer pairs and 65 RAPD primers were polymorphic and segregated at a 1:1 proportion. Thirty poorly saturated linkage groups were obtained, with 90 markers and 41 nonlinked markers. For the lines cultivated in Cascavel, three QTL were mapped in C2, E and N linkage groups, which explained 14.37, 10.31 and 7.34% of the phenotypic variation of protein content, respectively. For the lines cultivated in Viçosa, two QTL were mapped in linkage groups G and #1, which explained 9.51 and 7.34% of the phenotypic variation of protein content. Based on the mean of the two environments, two QTL were identified: one in the linkage group E (9.90%) and other in the group L (7.11%). In order for future studies to consistently detect QTL effects of different environments, genotypes with greater stability should be used.
publishDate 2008
dc.date.none.fl_str_mv 2008-12-11
dc.type.none.fl_str_mv
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://seer.sct.embrapa.br/index.php/pab/article/view/1080
url https://seer.sct.embrapa.br/index.php/pab/article/view/1080
dc.language.iso.fl_str_mv por
language por
dc.relation.none.fl_str_mv https://seer.sct.embrapa.br/index.php/pab/article/view/1080/5554
https://seer.sct.embrapa.br/index.php/pab/article/downloadSuppFile/1080/720
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Pesquisa Agropecuaria Brasileira
Pesquisa Agropecuária Brasileira
publisher.none.fl_str_mv Pesquisa Agropecuaria Brasileira
Pesquisa Agropecuária Brasileira
dc.source.none.fl_str_mv Pesquisa Agropecuaria Brasileira; v.43, n.11, nov. 2008; 1533-1541
Pesquisa Agropecuária Brasileira; v.43, n.11, nov. 2008; 1533-1541
1678-3921
0100-104x
reponame:Pesquisa Agropecuária Brasileira (Online)
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instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Pesquisa Agropecuária Brasileira (Online)
collection Pesquisa Agropecuária Brasileira (Online)
repository.name.fl_str_mv Pesquisa Agropecuária Brasileira (Online) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv pab@sct.embrapa.br || sct.pab@embrapa.br
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