QTL mapping for protein content in soybean cultivated in two tropical environments
Autor(a) principal: | |
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Data de Publicação: | 2008 |
Outros Autores: | , , , , , , |
Tipo de documento: | Artigo |
Idioma: | por |
Título da fonte: | Pesquisa Agropecuária Brasileira (Online) |
Texto Completo: | https://seer.sct.embrapa.br/index.php/pab/article/view/1080 |
Resumo: | The objectives of this study were to detect quantitative trait loci (QTL) for protein content in soybean grown in two distinct tropical environments and to build a genetic map for protein content. One hundred eighteen soybean recombinant inbred lines (RIL), obtained from a cross between cultivars BARC 8 and Garimpo, were used. The RIL were cultivated in two distinct Brazilian tropical environments: Cascavel county, in Paraná, and Viçosa county, in Minas Gerais (24º57'S, 53º27'W and 20º45'S, 42º52'W, respectively). Sixty-six SSR primer pairs and 65 RAPD primers were polymorphic and segregated at a 1:1 proportion. Thirty poorly saturated linkage groups were obtained, with 90 markers and 41 nonlinked markers. For the lines cultivated in Cascavel, three QTL were mapped in C2, E and N linkage groups, which explained 14.37, 10.31 and 7.34% of the phenotypic variation of protein content, respectively. For the lines cultivated in Viçosa, two QTL were mapped in linkage groups G and #1, which explained 9.51 and 7.34% of the phenotypic variation of protein content. Based on the mean of the two environments, two QTL were identified: one in the linkage group E (9.90%) and other in the group L (7.11%). In order for future studies to consistently detect QTL effects of different environments, genotypes with greater stability should be used. |
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QTL mapping for protein content in soybean cultivated in two tropical environmentsMapeamento de QTL quanto ao conteúdo de proteína em soja cultivada em dois ambientes tropicaisGlycine max; linkage map; molecular markers; recombinant inbred lines; quantitative trait lociGlycine max; mapa de ligação; marcador molecular; linhagem recombinante endogâmica; locos de características quantitativasThe objectives of this study were to detect quantitative trait loci (QTL) for protein content in soybean grown in two distinct tropical environments and to build a genetic map for protein content. One hundred eighteen soybean recombinant inbred lines (RIL), obtained from a cross between cultivars BARC 8 and Garimpo, were used. The RIL were cultivated in two distinct Brazilian tropical environments: Cascavel county, in Paraná, and Viçosa county, in Minas Gerais (24º57'S, 53º27'W and 20º45'S, 42º52'W, respectively). Sixty-six SSR primer pairs and 65 RAPD primers were polymorphic and segregated at a 1:1 proportion. Thirty poorly saturated linkage groups were obtained, with 90 markers and 41 nonlinked markers. For the lines cultivated in Cascavel, three QTL were mapped in C2, E and N linkage groups, which explained 14.37, 10.31 and 7.34% of the phenotypic variation of protein content, respectively. For the lines cultivated in Viçosa, two QTL were mapped in linkage groups G and #1, which explained 9.51 and 7.34% of the phenotypic variation of protein content. Based on the mean of the two environments, two QTL were identified: one in the linkage group E (9.90%) and other in the group L (7.11%). In order for future studies to consistently detect QTL effects of different environments, genotypes with greater stability should be used.Os objetivos deste trabalho foram detectar QTL relativos ao conteúdo de proteína, em soja cultivada em dois ambientes tropicais divergentes, e construir um mapa genético para o conteúdo de proteína em genótipos adaptados a condições tropicais. Foram usadas 118 linhagens recombinantes endogâmicas de soja, obtidas do cruzamento entre as cultivares BARC 8 e Garimpo. A população de linhagens recombinantes endogâmicas foi cultivada em dois ambientes contrastantes: Cascavel, PR, e Viçosa, MG (24º57'S, 53º27'W; e 20º45'S, 42º52'W, respectivamente). Sessenta e seis pares de iniciadores SSR e 65 iniciadores RAPD apresentaram fragmentos polimórficos que segregaram à proporção de 1:1. Foram obtidos 30 grupos de ligação pouco saturados, com 90 marcadores, além de 41 marcas não ligadas. Para as famílias cultivadas em Cascavel, três QTL foram mapeados nos grupos de ligação C2, E, e N, que explicaram 14,37, 10,31 e 7,34% da variação fenotípica do conteúdo de proteína, respectivamente. Para as famílias cultivadas em Viçosa, dois QTL foram mapeados nos grupos de ligação G e #1, que explicaram 9,51 e 7,34% da variação fenotípica do conteúdo de proteína. Com base na média dos dois ambientes, dois QTL foram identificados: um no grupo de ligação E (9,90%) e outro no grupo L (7,11%). Genótipos com maior estabilidade devem ser uados em trabalhos futuros, para a detecção de QTL com efeitos consistentes, em diferentes ambientes.Pesquisa Agropecuaria BrasileiraPesquisa Agropecuária BrasileiraCAPES e CNPqSoares, Taís Cristina BastosGood-God, Pedro Ivo VieiraMiranda, Fábio Demolinari deSoares, Yaska Janaína BastosSchuster, IvanPiovesan, Newton DenizBarros, Everaldo Gonçalves deMoreira, Maurilio Alves2008-12-11info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://seer.sct.embrapa.br/index.php/pab/article/view/1080Pesquisa Agropecuaria Brasileira; v.43, n.11, nov. 2008; 1533-1541Pesquisa Agropecuária Brasileira; v.43, n.11, nov. 2008; 1533-15411678-39210100-104xreponame:Pesquisa Agropecuária Brasileira (Online)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPAporhttps://seer.sct.embrapa.br/index.php/pab/article/view/1080/5554https://seer.sct.embrapa.br/index.php/pab/article/downloadSuppFile/1080/720info:eu-repo/semantics/openAccess2012-06-17T11:45:09Zoai:ojs.seer.sct.embrapa.br:article/1080Revistahttp://seer.sct.embrapa.br/index.php/pabPRIhttps://old.scielo.br/oai/scielo-oai.phppab@sct.embrapa.br || sct.pab@embrapa.br1678-39210100-204Xopendoar:2012-06-17T11:45:09Pesquisa Agropecuária Brasileira (Online) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false |
dc.title.none.fl_str_mv |
QTL mapping for protein content in soybean cultivated in two tropical environments Mapeamento de QTL quanto ao conteúdo de proteína em soja cultivada em dois ambientes tropicais |
title |
QTL mapping for protein content in soybean cultivated in two tropical environments |
spellingShingle |
QTL mapping for protein content in soybean cultivated in two tropical environments Soares, Taís Cristina Bastos Glycine max; linkage map; molecular markers; recombinant inbred lines; quantitative trait loci Glycine max; mapa de ligação; marcador molecular; linhagem recombinante endogâmica; locos de características quantitativas |
title_short |
QTL mapping for protein content in soybean cultivated in two tropical environments |
title_full |
QTL mapping for protein content in soybean cultivated in two tropical environments |
title_fullStr |
QTL mapping for protein content in soybean cultivated in two tropical environments |
title_full_unstemmed |
QTL mapping for protein content in soybean cultivated in two tropical environments |
title_sort |
QTL mapping for protein content in soybean cultivated in two tropical environments |
author |
Soares, Taís Cristina Bastos |
author_facet |
Soares, Taís Cristina Bastos Good-God, Pedro Ivo Vieira Miranda, Fábio Demolinari de Soares, Yaska Janaína Bastos Schuster, Ivan Piovesan, Newton Deniz Barros, Everaldo Gonçalves de Moreira, Maurilio Alves |
author_role |
author |
author2 |
Good-God, Pedro Ivo Vieira Miranda, Fábio Demolinari de Soares, Yaska Janaína Bastos Schuster, Ivan Piovesan, Newton Deniz Barros, Everaldo Gonçalves de Moreira, Maurilio Alves |
author2_role |
author author author author author author author |
dc.contributor.none.fl_str_mv |
CAPES e CNPq |
dc.contributor.author.fl_str_mv |
Soares, Taís Cristina Bastos Good-God, Pedro Ivo Vieira Miranda, Fábio Demolinari de Soares, Yaska Janaína Bastos Schuster, Ivan Piovesan, Newton Deniz Barros, Everaldo Gonçalves de Moreira, Maurilio Alves |
dc.subject.por.fl_str_mv |
Glycine max; linkage map; molecular markers; recombinant inbred lines; quantitative trait loci Glycine max; mapa de ligação; marcador molecular; linhagem recombinante endogâmica; locos de características quantitativas |
topic |
Glycine max; linkage map; molecular markers; recombinant inbred lines; quantitative trait loci Glycine max; mapa de ligação; marcador molecular; linhagem recombinante endogâmica; locos de características quantitativas |
description |
The objectives of this study were to detect quantitative trait loci (QTL) for protein content in soybean grown in two distinct tropical environments and to build a genetic map for protein content. One hundred eighteen soybean recombinant inbred lines (RIL), obtained from a cross between cultivars BARC 8 and Garimpo, were used. The RIL were cultivated in two distinct Brazilian tropical environments: Cascavel county, in Paraná, and Viçosa county, in Minas Gerais (24º57'S, 53º27'W and 20º45'S, 42º52'W, respectively). Sixty-six SSR primer pairs and 65 RAPD primers were polymorphic and segregated at a 1:1 proportion. Thirty poorly saturated linkage groups were obtained, with 90 markers and 41 nonlinked markers. For the lines cultivated in Cascavel, three QTL were mapped in C2, E and N linkage groups, which explained 14.37, 10.31 and 7.34% of the phenotypic variation of protein content, respectively. For the lines cultivated in Viçosa, two QTL were mapped in linkage groups G and #1, which explained 9.51 and 7.34% of the phenotypic variation of protein content. Based on the mean of the two environments, two QTL were identified: one in the linkage group E (9.90%) and other in the group L (7.11%). In order for future studies to consistently detect QTL effects of different environments, genotypes with greater stability should be used. |
publishDate |
2008 |
dc.date.none.fl_str_mv |
2008-12-11 |
dc.type.none.fl_str_mv |
|
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://seer.sct.embrapa.br/index.php/pab/article/view/1080 |
url |
https://seer.sct.embrapa.br/index.php/pab/article/view/1080 |
dc.language.iso.fl_str_mv |
por |
language |
por |
dc.relation.none.fl_str_mv |
https://seer.sct.embrapa.br/index.php/pab/article/view/1080/5554 https://seer.sct.embrapa.br/index.php/pab/article/downloadSuppFile/1080/720 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Pesquisa Agropecuaria Brasileira Pesquisa Agropecuária Brasileira |
publisher.none.fl_str_mv |
Pesquisa Agropecuaria Brasileira Pesquisa Agropecuária Brasileira |
dc.source.none.fl_str_mv |
Pesquisa Agropecuaria Brasileira; v.43, n.11, nov. 2008; 1533-1541 Pesquisa Agropecuária Brasileira; v.43, n.11, nov. 2008; 1533-1541 1678-3921 0100-104x reponame:Pesquisa Agropecuária Brasileira (Online) instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa) instacron:EMBRAPA |
instname_str |
Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
instacron_str |
EMBRAPA |
institution |
EMBRAPA |
reponame_str |
Pesquisa Agropecuária Brasileira (Online) |
collection |
Pesquisa Agropecuária Brasileira (Online) |
repository.name.fl_str_mv |
Pesquisa Agropecuária Brasileira (Online) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
repository.mail.fl_str_mv |
pab@sct.embrapa.br || sct.pab@embrapa.br |
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1793416677673664512 |