Paternity test in "Mangalarga-Marchador" equines by DNA-fingerprinting
Autor(a) principal: | |
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Data de Publicação: | 2000 |
Outros Autores: | |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Pesquisa Agropecuária Brasileira (Online) |
Texto Completo: | https://seer.sct.embrapa.br/index.php/pab/article/view/5989 |
Resumo: | GC-rich molecular minisatellite probes isolated from the human genome have presented a poor ability for individualization in horses. In this study new DNA sequences were isolated which could be used in paternity tests in horses. Genomic DNA from "Mangalarga-Marchador" horses was treated with restriction enzymes that preferentially digest non-repetitive sequences, so preserving the structure where mini and microsatellites are located. Four clones (S01, S05, S07 and S09) selected from a genomic library screened with a (TG)n oligonucleotide showed similar hybridization profiles generating bands of DNA-fingerprinting type. Using these probes the individualization power obtained was 10-8, which is 105-fold higher than that obtained with M13, another GC-rich type probe. All clones were efficient in parentage detection in crossbreedings and presented a 27 bp consensus sequence, GTTTCATTTATTATTCTTTGGAAGAAA, which was repeated 12, 18, 11 and 21 times in clones S01, S05, S07 and S09, respectively. |
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Paternity test in "Mangalarga-Marchador" equines by DNA-fingerprintingTeste de paternidade em eqinos Mangalarga-Marchador pela técnica do DNA-"fingerprinting"breeding methods;molecular cloning; progeny testing; horses; identification; genetic polymorphismmétodos de melhoramento; clonagem molecular; teste de progênie; cavalos; identificação; polimorfismo genéticoGC-rich molecular minisatellite probes isolated from the human genome have presented a poor ability for individualization in horses. In this study new DNA sequences were isolated which could be used in paternity tests in horses. Genomic DNA from "Mangalarga-Marchador" horses was treated with restriction enzymes that preferentially digest non-repetitive sequences, so preserving the structure where mini and microsatellites are located. Four clones (S01, S05, S07 and S09) selected from a genomic library screened with a (TG)n oligonucleotide showed similar hybridization profiles generating bands of DNA-fingerprinting type. Using these probes the individualization power obtained was 10-8, which is 105-fold higher than that obtained with M13, another GC-rich type probe. All clones were efficient in parentage detection in crossbreedings and presented a 27 bp consensus sequence, GTTTCATTTATTATTCTTTGGAAGAAA, which was repeated 12, 18, 11 and 21 times in clones S01, S05, S07 and S09, respectively.Sondas moleculares de minissatélites CG-ricas isoladas do genoma humano têm apresentado pouca habilidade de individualização em cavalos. Neste trabalho foram isoladas novas seqüências de DNA, que podem ser utilizadas para teste de paternidade em cavalos. DNA genômico de cavalos Mangalarga-Marchador foi tratado com enzimas de restrição que digerem preferencialmente seqüências não-repetitivas, preservando, assim, a estrutura onde os mini e microssatélites estão localizados. Quatro clones (S01, S05, S07 and S09), selecionados a partir de uma livraria genômica com o oligonucleotídeo (TG)n, demonstraram um perfil de hibridização semelhante com bandas do tipo DNA "fingerprinting". Utilizando estas sondas, o poder de individualização obtido foi de 10-8, 105 vezes mais elevado do que o obtido com a M13, outra sonda do tipo GC-rica. Todos os clones foram eficientes para a determinação do parentesco em cruzamentos e apresentaram uma seqüência-consensus de 27 pb, GTTTCATTTATTATTCTTTGGAAGAAA, que estava repetida 12, 18, 11 e 21 vezes nos clones S01, S05, S07 e S09, respectivamente.Pesquisa Agropecuaria BrasileiraPesquisa Agropecuária BrasileiraAnunciação, Carlos EduardoFilho, Spartaco Astolfi2000-10-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://seer.sct.embrapa.br/index.php/pab/article/view/5989Pesquisa Agropecuaria Brasileira; v.35, n.10, out. 2000; 2007-2015Pesquisa Agropecuária Brasileira; v.35, n.10, out. 2000; 2007-20151678-39210100-104xreponame:Pesquisa Agropecuária Brasileira (Online)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPAenghttps://seer.sct.embrapa.br/index.php/pab/article/view/5989/3093info:eu-repo/semantics/openAccess2014-08-19T19:49:41Zoai:ojs.seer.sct.embrapa.br:article/5989Revistahttp://seer.sct.embrapa.br/index.php/pabPRIhttps://old.scielo.br/oai/scielo-oai.phppab@sct.embrapa.br || sct.pab@embrapa.br1678-39210100-204Xopendoar:2014-08-19T19:49:41Pesquisa Agropecuária Brasileira (Online) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false |
dc.title.none.fl_str_mv |
Paternity test in "Mangalarga-Marchador" equines by DNA-fingerprinting Teste de paternidade em eqinos Mangalarga-Marchador pela técnica do DNA-"fingerprinting" |
title |
Paternity test in "Mangalarga-Marchador" equines by DNA-fingerprinting |
spellingShingle |
Paternity test in "Mangalarga-Marchador" equines by DNA-fingerprinting Anunciação, Carlos Eduardo breeding methods;molecular cloning; progeny testing; horses; identification; genetic polymorphism métodos de melhoramento; clonagem molecular; teste de progênie; cavalos; identificação; polimorfismo genético |
title_short |
Paternity test in "Mangalarga-Marchador" equines by DNA-fingerprinting |
title_full |
Paternity test in "Mangalarga-Marchador" equines by DNA-fingerprinting |
title_fullStr |
Paternity test in "Mangalarga-Marchador" equines by DNA-fingerprinting |
title_full_unstemmed |
Paternity test in "Mangalarga-Marchador" equines by DNA-fingerprinting |
title_sort |
Paternity test in "Mangalarga-Marchador" equines by DNA-fingerprinting |
author |
Anunciação, Carlos Eduardo |
author_facet |
Anunciação, Carlos Eduardo Filho, Spartaco Astolfi |
author_role |
author |
author2 |
Filho, Spartaco Astolfi |
author2_role |
author |
dc.contributor.none.fl_str_mv |
|
dc.contributor.author.fl_str_mv |
Anunciação, Carlos Eduardo Filho, Spartaco Astolfi |
dc.subject.por.fl_str_mv |
breeding methods;molecular cloning; progeny testing; horses; identification; genetic polymorphism métodos de melhoramento; clonagem molecular; teste de progênie; cavalos; identificação; polimorfismo genético |
topic |
breeding methods;molecular cloning; progeny testing; horses; identification; genetic polymorphism métodos de melhoramento; clonagem molecular; teste de progênie; cavalos; identificação; polimorfismo genético |
description |
GC-rich molecular minisatellite probes isolated from the human genome have presented a poor ability for individualization in horses. In this study new DNA sequences were isolated which could be used in paternity tests in horses. Genomic DNA from "Mangalarga-Marchador" horses was treated with restriction enzymes that preferentially digest non-repetitive sequences, so preserving the structure where mini and microsatellites are located. Four clones (S01, S05, S07 and S09) selected from a genomic library screened with a (TG)n oligonucleotide showed similar hybridization profiles generating bands of DNA-fingerprinting type. Using these probes the individualization power obtained was 10-8, which is 105-fold higher than that obtained with M13, another GC-rich type probe. All clones were efficient in parentage detection in crossbreedings and presented a 27 bp consensus sequence, GTTTCATTTATTATTCTTTGGAAGAAA, which was repeated 12, 18, 11 and 21 times in clones S01, S05, S07 and S09, respectively. |
publishDate |
2000 |
dc.date.none.fl_str_mv |
2000-10-01 |
dc.type.none.fl_str_mv |
|
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://seer.sct.embrapa.br/index.php/pab/article/view/5989 |
url |
https://seer.sct.embrapa.br/index.php/pab/article/view/5989 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
https://seer.sct.embrapa.br/index.php/pab/article/view/5989/3093 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Pesquisa Agropecuaria Brasileira Pesquisa Agropecuária Brasileira |
publisher.none.fl_str_mv |
Pesquisa Agropecuaria Brasileira Pesquisa Agropecuária Brasileira |
dc.source.none.fl_str_mv |
Pesquisa Agropecuaria Brasileira; v.35, n.10, out. 2000; 2007-2015 Pesquisa Agropecuária Brasileira; v.35, n.10, out. 2000; 2007-2015 1678-3921 0100-104x reponame:Pesquisa Agropecuária Brasileira (Online) instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa) instacron:EMBRAPA |
instname_str |
Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
instacron_str |
EMBRAPA |
institution |
EMBRAPA |
reponame_str |
Pesquisa Agropecuária Brasileira (Online) |
collection |
Pesquisa Agropecuária Brasileira (Online) |
repository.name.fl_str_mv |
Pesquisa Agropecuária Brasileira (Online) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
repository.mail.fl_str_mv |
pab@sct.embrapa.br || sct.pab@embrapa.br |
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