Paternity test in "Mangalarga-Marchador" equines by DNA-fingerprinting

Detalhes bibliográficos
Autor(a) principal: Anunciação, Carlos Eduardo
Data de Publicação: 2000
Outros Autores: Filho, Spartaco Astolfi
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Pesquisa Agropecuária Brasileira (Online)
Texto Completo: https://seer.sct.embrapa.br/index.php/pab/article/view/5989
Resumo: GC-rich molecular minisatellite probes isolated from the human genome have presented a poor ability for individualization in horses. In this study new DNA sequences were isolated which could be used in paternity tests in horses. Genomic DNA from "Mangalarga-Marchador" horses was treated with restriction enzymes that preferentially digest non-repetitive sequences, so preserving the structure where mini and microsatellites are located. Four clones (S01, S05, S07 and S09) selected from a genomic library screened with a (TG)n oligonucleotide showed similar hybridization profiles generating bands of DNA-fingerprinting type. Using these probes the individualization power obtained was 10-8, which is 105-fold higher than that obtained with M13, another GC-rich type probe. All clones were efficient in parentage detection in crossbreedings and presented a 27 bp consensus sequence, GTTTCATTTATTATTCTTTGGAAGAAA, which was repeated 12, 18, 11 and 21 times in clones S01, S05, S07 and S09, respectively.
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spelling Paternity test in "Mangalarga-Marchador" equines by DNA-fingerprintingTeste de paternidade em eqinos Mangalarga-Marchador pela técnica do DNA-"fingerprinting"breeding methods;molecular cloning; progeny testing; horses; identification; genetic polymorphismmétodos de melhoramento; clonagem molecular; teste de progênie; cavalos; identificação; polimorfismo genéticoGC-rich molecular minisatellite probes isolated from the human genome have presented a poor ability for individualization in horses. In this study new DNA sequences were isolated which could be used in paternity tests in horses. Genomic DNA from "Mangalarga-Marchador" horses was treated with restriction enzymes that preferentially digest non-repetitive sequences, so preserving the structure where mini and microsatellites are located. Four clones (S01, S05, S07 and S09) selected from a genomic library screened with a (TG)n oligonucleotide showed similar hybridization profiles generating bands of DNA-fingerprinting type. Using these probes the individualization power obtained was 10-8, which is 105-fold higher than that obtained with M13, another GC-rich type probe. All clones were efficient in parentage detection in crossbreedings and presented a 27 bp consensus sequence, GTTTCATTTATTATTCTTTGGAAGAAA, which was repeated 12, 18, 11 and 21 times in clones S01, S05, S07 and S09, respectively.Sondas moleculares de minissatélites CG-ricas isoladas do genoma humano têm apresentado pouca habilidade de individualização em cavalos. Neste trabalho foram isoladas novas seqüências de DNA, que podem ser utilizadas para teste de paternidade em cavalos. DNA genômico de cavalos Mangalarga-Marchador foi tratado com enzimas de restrição que digerem preferencialmente seqüências não-repetitivas, preservando, assim, a estrutura onde os mini e microssatélites estão localizados. Quatro clones (S01, S05, S07 and S09), selecionados a partir de uma livraria genômica com o oligonucleotídeo (TG)n, demonstraram um perfil de hibridização semelhante com bandas do tipo DNA "fingerprinting". Utilizando estas sondas, o poder de individualização obtido foi de 10-8, 105 vezes mais elevado do que o obtido com a M13, outra sonda do tipo GC-rica. Todos os clones foram eficientes para a determinação do parentesco em cruzamentos e apresentaram uma seqüência-consensus de 27 pb, GTTTCATTTATTATTCTTTGGAAGAAA, que estava repetida 12, 18, 11 e 21 vezes nos clones S01, S05, S07 e S09, respectivamente.Pesquisa Agropecuaria BrasileiraPesquisa Agropecuária BrasileiraAnunciação, Carlos EduardoFilho, Spartaco Astolfi2000-10-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://seer.sct.embrapa.br/index.php/pab/article/view/5989Pesquisa Agropecuaria Brasileira; v.35, n.10, out. 2000; 2007-2015Pesquisa Agropecuária Brasileira; v.35, n.10, out. 2000; 2007-20151678-39210100-104xreponame:Pesquisa Agropecuária Brasileira (Online)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPAenghttps://seer.sct.embrapa.br/index.php/pab/article/view/5989/3093info:eu-repo/semantics/openAccess2014-08-19T19:49:41Zoai:ojs.seer.sct.embrapa.br:article/5989Revistahttp://seer.sct.embrapa.br/index.php/pabPRIhttps://old.scielo.br/oai/scielo-oai.phppab@sct.embrapa.br || sct.pab@embrapa.br1678-39210100-204Xopendoar:2014-08-19T19:49:41Pesquisa Agropecuária Brasileira (Online) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Paternity test in "Mangalarga-Marchador" equines by DNA-fingerprinting
Teste de paternidade em eqinos Mangalarga-Marchador pela técnica do DNA-"fingerprinting"
title Paternity test in "Mangalarga-Marchador" equines by DNA-fingerprinting
spellingShingle Paternity test in "Mangalarga-Marchador" equines by DNA-fingerprinting
Anunciação, Carlos Eduardo
breeding methods;molecular cloning; progeny testing; horses; identification; genetic polymorphism
métodos de melhoramento; clonagem molecular; teste de progênie; cavalos; identificação; polimorfismo genético
title_short Paternity test in "Mangalarga-Marchador" equines by DNA-fingerprinting
title_full Paternity test in "Mangalarga-Marchador" equines by DNA-fingerprinting
title_fullStr Paternity test in "Mangalarga-Marchador" equines by DNA-fingerprinting
title_full_unstemmed Paternity test in "Mangalarga-Marchador" equines by DNA-fingerprinting
title_sort Paternity test in "Mangalarga-Marchador" equines by DNA-fingerprinting
author Anunciação, Carlos Eduardo
author_facet Anunciação, Carlos Eduardo
Filho, Spartaco Astolfi
author_role author
author2 Filho, Spartaco Astolfi
author2_role author
dc.contributor.none.fl_str_mv

dc.contributor.author.fl_str_mv Anunciação, Carlos Eduardo
Filho, Spartaco Astolfi
dc.subject.por.fl_str_mv breeding methods;molecular cloning; progeny testing; horses; identification; genetic polymorphism
métodos de melhoramento; clonagem molecular; teste de progênie; cavalos; identificação; polimorfismo genético
topic breeding methods;molecular cloning; progeny testing; horses; identification; genetic polymorphism
métodos de melhoramento; clonagem molecular; teste de progênie; cavalos; identificação; polimorfismo genético
description GC-rich molecular minisatellite probes isolated from the human genome have presented a poor ability for individualization in horses. In this study new DNA sequences were isolated which could be used in paternity tests in horses. Genomic DNA from "Mangalarga-Marchador" horses was treated with restriction enzymes that preferentially digest non-repetitive sequences, so preserving the structure where mini and microsatellites are located. Four clones (S01, S05, S07 and S09) selected from a genomic library screened with a (TG)n oligonucleotide showed similar hybridization profiles generating bands of DNA-fingerprinting type. Using these probes the individualization power obtained was 10-8, which is 105-fold higher than that obtained with M13, another GC-rich type probe. All clones were efficient in parentage detection in crossbreedings and presented a 27 bp consensus sequence, GTTTCATTTATTATTCTTTGGAAGAAA, which was repeated 12, 18, 11 and 21 times in clones S01, S05, S07 and S09, respectively.
publishDate 2000
dc.date.none.fl_str_mv 2000-10-01
dc.type.none.fl_str_mv
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://seer.sct.embrapa.br/index.php/pab/article/view/5989
url https://seer.sct.embrapa.br/index.php/pab/article/view/5989
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv https://seer.sct.embrapa.br/index.php/pab/article/view/5989/3093
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Pesquisa Agropecuaria Brasileira
Pesquisa Agropecuária Brasileira
publisher.none.fl_str_mv Pesquisa Agropecuaria Brasileira
Pesquisa Agropecuária Brasileira
dc.source.none.fl_str_mv Pesquisa Agropecuaria Brasileira; v.35, n.10, out. 2000; 2007-2015
Pesquisa Agropecuária Brasileira; v.35, n.10, out. 2000; 2007-2015
1678-3921
0100-104x
reponame:Pesquisa Agropecuária Brasileira (Online)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Pesquisa Agropecuária Brasileira (Online)
collection Pesquisa Agropecuária Brasileira (Online)
repository.name.fl_str_mv Pesquisa Agropecuária Brasileira (Online) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv pab@sct.embrapa.br || sct.pab@embrapa.br
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