Phenotypic and marker‑assisted selection of common bean families with high grain yield

Detalhes bibliográficos
Autor(a) principal: Pereira, Helton Santos
Data de Publicação: 2008
Outros Autores: Santos, João Bosco dos, Souza, Thaís Paula de, Lima, Igor Almeida
Tipo de documento: Artigo
Idioma: por
Título da fonte: Pesquisa Agropecuária Brasileira (Online)
Texto Completo: https://seer.sct.embrapa.br/index.php/pab/article/view/1127
Resumo: The objective of this work was to select common bean families with high grain yield, using phenotypic and marker-assisted selections (MAS). Evaluations were made for 394 families of four populations and their six parents, in Lavras county, Minas Gerais, Brazil. Two field experiments were conducted: one in the F3:4 generation, in the rainy season of 2005/2006, using a 20x20 simple lattice design; and other in the F3:5 generation, in the dry season of 2006, using a 20x20 triple lattice design. Genetic and phenotypic parameters were estimated, and the families were genotyped with microsatellite markers for grain yield quantitative trait loci (QTL), that had been identified previously. Simple marker association analysis was performed between markers and grain yield, and an index was estimated for MAS. The high variability between families and the heritability estimates made high genetic gains possible through phenotypic selection. The markers explained a small percentage of phenotypic variation, and presented high QTL x environment and QTL x population interactions. The MAS achieved small gains, with low coincidence of families selected by both methodologies, showing, in this case, that the MAS inefficiency was mainly due to the low number of available markers.
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spelling Phenotypic and marker‑assisted selection of common bean families with high grain yieldSeleção fenotípica e assistida por marcadores moleculares de famílias de feijoeiro-comum com alta produtividadePhaseolus vulgaris; QTL; quantitative trait loci; simple marker association analysis; genetic gain; heritability; microsatellitesPhaseolus vulgaris; QTL; locos de características quantitativas; associação por marcas simples; ganho genético; herdabilidade; microssatélitesThe objective of this work was to select common bean families with high grain yield, using phenotypic and marker-assisted selections (MAS). Evaluations were made for 394 families of four populations and their six parents, in Lavras county, Minas Gerais, Brazil. Two field experiments were conducted: one in the F3:4 generation, in the rainy season of 2005/2006, using a 20x20 simple lattice design; and other in the F3:5 generation, in the dry season of 2006, using a 20x20 triple lattice design. Genetic and phenotypic parameters were estimated, and the families were genotyped with microsatellite markers for grain yield quantitative trait loci (QTL), that had been identified previously. Simple marker association analysis was performed between markers and grain yield, and an index was estimated for MAS. The high variability between families and the heritability estimates made high genetic gains possible through phenotypic selection. The markers explained a small percentage of phenotypic variation, and presented high QTL x environment and QTL x population interactions. The MAS achieved small gains, with low coincidence of families selected by both methodologies, showing, in this case, that the MAS inefficiency was mainly due to the low number of available markers.O objetivo deste trabalho foi selecionar famílias de feijoeiro-comum, com alta produtividade de grãos, por meio de seleção fenotípica e de seleção assistida por marcadores moleculares (SAM). Foram avaliadas 394 famílias, de quatro populações, e seus seis genitores, no Município de Lavras, em dois experimentos: um na geração F3:4, na safra das águas de 2005/2006, em látice simples 20x20; e outro na geração F3:5, na safra da seca de 2006, em látice triplo 20x20. Foram estimados parâmetros genéticos e fenotípicos, e foi realizada a genotipagem das famílias, com marcadores microssatélites associados a QTL controladores da produção de grãos, previamente identificados. Também foram realizadas análises de associação por marcas simples, entre os marcadores e a produção de grãos, e foi obtido um índice para a SAM. A ampla variabilidade entre famílias e as altas estimativas de herdabilidade possibilitaram obter elevados ganhos com a seleção fenotípica. Os marcadores explicaram pequena percentagem da variação fenotípica e apresentaram alta interação QTL x ambiente e QTL x população. A SAM gerou baixos ganhos e a coincidência de famílias selecionadas pelas duas metodologias foi baixa, o que evidencia, neste caso, a ineficiência da SAM, principalmente pela pouca disponibilidade de marcadores ligados a QTL.Pesquisa Agropecuaria BrasileiraPesquisa Agropecuária BrasileiraCnpq, Fapemig, CapesPereira, Helton SantosSantos, João Bosco dosSouza, Thaís Paula deLima, Igor Almeida2008-12-11info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://seer.sct.embrapa.br/index.php/pab/article/view/1127Pesquisa Agropecuaria Brasileira; v.43, n.11, nov. 2008; 1551-1558Pesquisa Agropecuária Brasileira; v.43, n.11, nov. 2008; 1551-15581678-39210100-104xreponame:Pesquisa Agropecuária Brasileira (Online)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPAporhttps://seer.sct.embrapa.br/index.php/pab/article/view/1127/5556https://seer.sct.embrapa.br/index.php/pab/article/downloadSuppFile/1127/756info:eu-repo/semantics/openAccess2012-06-17T11:45:09Zoai:ojs.seer.sct.embrapa.br:article/1127Revistahttp://seer.sct.embrapa.br/index.php/pabPRIhttps://old.scielo.br/oai/scielo-oai.phppab@sct.embrapa.br || sct.pab@embrapa.br1678-39210100-204Xopendoar:2012-06-17T11:45:09Pesquisa Agropecuária Brasileira (Online) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Phenotypic and marker‑assisted selection of common bean families with high grain yield
Seleção fenotípica e assistida por marcadores moleculares de famílias de feijoeiro-comum com alta produtividade
title Phenotypic and marker‑assisted selection of common bean families with high grain yield
spellingShingle Phenotypic and marker‑assisted selection of common bean families with high grain yield
Pereira, Helton Santos
Phaseolus vulgaris; QTL; quantitative trait loci; simple marker association analysis; genetic gain; heritability; microsatellites
Phaseolus vulgaris; QTL; locos de características quantitativas; associação por marcas simples; ganho genético; herdabilidade; microssatélites
title_short Phenotypic and marker‑assisted selection of common bean families with high grain yield
title_full Phenotypic and marker‑assisted selection of common bean families with high grain yield
title_fullStr Phenotypic and marker‑assisted selection of common bean families with high grain yield
title_full_unstemmed Phenotypic and marker‑assisted selection of common bean families with high grain yield
title_sort Phenotypic and marker‑assisted selection of common bean families with high grain yield
author Pereira, Helton Santos
author_facet Pereira, Helton Santos
Santos, João Bosco dos
Souza, Thaís Paula de
Lima, Igor Almeida
author_role author
author2 Santos, João Bosco dos
Souza, Thaís Paula de
Lima, Igor Almeida
author2_role author
author
author
dc.contributor.none.fl_str_mv
Cnpq, Fapemig, Capes
dc.contributor.author.fl_str_mv Pereira, Helton Santos
Santos, João Bosco dos
Souza, Thaís Paula de
Lima, Igor Almeida
dc.subject.por.fl_str_mv Phaseolus vulgaris; QTL; quantitative trait loci; simple marker association analysis; genetic gain; heritability; microsatellites
Phaseolus vulgaris; QTL; locos de características quantitativas; associação por marcas simples; ganho genético; herdabilidade; microssatélites
topic Phaseolus vulgaris; QTL; quantitative trait loci; simple marker association analysis; genetic gain; heritability; microsatellites
Phaseolus vulgaris; QTL; locos de características quantitativas; associação por marcas simples; ganho genético; herdabilidade; microssatélites
description The objective of this work was to select common bean families with high grain yield, using phenotypic and marker-assisted selections (MAS). Evaluations were made for 394 families of four populations and their six parents, in Lavras county, Minas Gerais, Brazil. Two field experiments were conducted: one in the F3:4 generation, in the rainy season of 2005/2006, using a 20x20 simple lattice design; and other in the F3:5 generation, in the dry season of 2006, using a 20x20 triple lattice design. Genetic and phenotypic parameters were estimated, and the families were genotyped with microsatellite markers for grain yield quantitative trait loci (QTL), that had been identified previously. Simple marker association analysis was performed between markers and grain yield, and an index was estimated for MAS. The high variability between families and the heritability estimates made high genetic gains possible through phenotypic selection. The markers explained a small percentage of phenotypic variation, and presented high QTL x environment and QTL x population interactions. The MAS achieved small gains, with low coincidence of families selected by both methodologies, showing, in this case, that the MAS inefficiency was mainly due to the low number of available markers.
publishDate 2008
dc.date.none.fl_str_mv 2008-12-11
dc.type.none.fl_str_mv
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://seer.sct.embrapa.br/index.php/pab/article/view/1127
url https://seer.sct.embrapa.br/index.php/pab/article/view/1127
dc.language.iso.fl_str_mv por
language por
dc.relation.none.fl_str_mv https://seer.sct.embrapa.br/index.php/pab/article/view/1127/5556
https://seer.sct.embrapa.br/index.php/pab/article/downloadSuppFile/1127/756
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Pesquisa Agropecuaria Brasileira
Pesquisa Agropecuária Brasileira
publisher.none.fl_str_mv Pesquisa Agropecuaria Brasileira
Pesquisa Agropecuária Brasileira
dc.source.none.fl_str_mv Pesquisa Agropecuaria Brasileira; v.43, n.11, nov. 2008; 1551-1558
Pesquisa Agropecuária Brasileira; v.43, n.11, nov. 2008; 1551-1558
1678-3921
0100-104x
reponame:Pesquisa Agropecuária Brasileira (Online)
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instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Pesquisa Agropecuária Brasileira (Online)
collection Pesquisa Agropecuária Brasileira (Online)
repository.name.fl_str_mv Pesquisa Agropecuária Brasileira (Online) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv pab@sct.embrapa.br || sct.pab@embrapa.br
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