Molecular identification of Trichogramma species from regions in Brazil using the sequencing of the ITS2 region of ribosomal DNA.

Detalhes bibliográficos
Autor(a) principal: SANTOS, N. R.
Data de Publicação: 2015
Outros Autores: ALMEIDA, R. P. de, PADILHA, I. Q. M., ARAÚJO, D. A. M., CREÃO-DUARTE, A. J.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1041586
Resumo: The objective of this work was the identification and differentiation of Trichogramma exiguum Pinto and Platner species, T. pretiosum Riley, and T. galloi Zucchi using sequences of the ITS2 region of ribosomal DNA. After extracting DNA from the studied species, a PCR reaction was performed, where the amplified samples were subjected to sequencing. The sequences obtained were submitted to a similarity search in GenBank (NCBI - National Center for Biotechnology Information) using the BLAST program, aiming to determine the similarity of these sequences with the species already deposited in the referenced database, and then multiple sequences were aligned using version 2.0 of the ClustalX program. According to the results of the multiple alignments of all sequences obtained, it was possible to observe the differences between the T. pretiosum, T. galloi and T. exiguum species. It was concluded that using the sequences of the ITS2 region of the ribosomal DNA was efficient in the differentiation of the studied Trichogramma species, which suggests a strong inter-specific variation among species.
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spelling Molecular identification of Trichogramma species from regions in Brazil using the sequencing of the ITS2 region of ribosomal DNA.MicrohymenopteraParasitoidDNA ribossomalDNATrichogrammaThe objective of this work was the identification and differentiation of Trichogramma exiguum Pinto and Platner species, T. pretiosum Riley, and T. galloi Zucchi using sequences of the ITS2 region of ribosomal DNA. After extracting DNA from the studied species, a PCR reaction was performed, where the amplified samples were subjected to sequencing. The sequences obtained were submitted to a similarity search in GenBank (NCBI - National Center for Biotechnology Information) using the BLAST program, aiming to determine the similarity of these sequences with the species already deposited in the referenced database, and then multiple sequences were aligned using version 2.0 of the ClustalX program. According to the results of the multiple alignments of all sequences obtained, it was possible to observe the differences between the T. pretiosum, T. galloi and T. exiguum species. It was concluded that using the sequences of the ITS2 region of the ribosomal DNA was efficient in the differentiation of the studied Trichogramma species, which suggests a strong inter-specific variation among species.N. R. SANTOS, UFPB; RAUL PORFIRIO DE ALMEIDA, CNPA; I. Q. M. PADILHA, UFPB; D. A. M. ARAÚJO, UFPB; A. J. CREÃO-DUARTE, UFPB.SANTOS, N. R.ALMEIDA, R. P. dePADILHA, I. Q. M.ARAÚJO, D. A. M.CREÃO-DUARTE, A. J.2016-03-22T11:11:11Z2016-03-22T11:11:11Z2016-03-2220152016-03-22T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleBrazilian Journal of Biology, v. 75, n. 2, p. 391-395, 2015.http://www.alice.cnptia.embrapa.br/alice/handle/doc/1041586enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-16T03:08:07Zoai:www.alice.cnptia.embrapa.br:doc/1041586Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542017-08-16T03:08:07falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-16T03:08:07Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Molecular identification of Trichogramma species from regions in Brazil using the sequencing of the ITS2 region of ribosomal DNA.
title Molecular identification of Trichogramma species from regions in Brazil using the sequencing of the ITS2 region of ribosomal DNA.
spellingShingle Molecular identification of Trichogramma species from regions in Brazil using the sequencing of the ITS2 region of ribosomal DNA.
SANTOS, N. R.
Microhymenoptera
Parasitoid
DNA ribossomal
DNA
Trichogramma
title_short Molecular identification of Trichogramma species from regions in Brazil using the sequencing of the ITS2 region of ribosomal DNA.
title_full Molecular identification of Trichogramma species from regions in Brazil using the sequencing of the ITS2 region of ribosomal DNA.
title_fullStr Molecular identification of Trichogramma species from regions in Brazil using the sequencing of the ITS2 region of ribosomal DNA.
title_full_unstemmed Molecular identification of Trichogramma species from regions in Brazil using the sequencing of the ITS2 region of ribosomal DNA.
title_sort Molecular identification of Trichogramma species from regions in Brazil using the sequencing of the ITS2 region of ribosomal DNA.
author SANTOS, N. R.
author_facet SANTOS, N. R.
ALMEIDA, R. P. de
PADILHA, I. Q. M.
ARAÚJO, D. A. M.
CREÃO-DUARTE, A. J.
author_role author
author2 ALMEIDA, R. P. de
PADILHA, I. Q. M.
ARAÚJO, D. A. M.
CREÃO-DUARTE, A. J.
author2_role author
author
author
author
dc.contributor.none.fl_str_mv N. R. SANTOS, UFPB; RAUL PORFIRIO DE ALMEIDA, CNPA; I. Q. M. PADILHA, UFPB; D. A. M. ARAÚJO, UFPB; A. J. CREÃO-DUARTE, UFPB.
dc.contributor.author.fl_str_mv SANTOS, N. R.
ALMEIDA, R. P. de
PADILHA, I. Q. M.
ARAÚJO, D. A. M.
CREÃO-DUARTE, A. J.
dc.subject.por.fl_str_mv Microhymenoptera
Parasitoid
DNA ribossomal
DNA
Trichogramma
topic Microhymenoptera
Parasitoid
DNA ribossomal
DNA
Trichogramma
description The objective of this work was the identification and differentiation of Trichogramma exiguum Pinto and Platner species, T. pretiosum Riley, and T. galloi Zucchi using sequences of the ITS2 region of ribosomal DNA. After extracting DNA from the studied species, a PCR reaction was performed, where the amplified samples were subjected to sequencing. The sequences obtained were submitted to a similarity search in GenBank (NCBI - National Center for Biotechnology Information) using the BLAST program, aiming to determine the similarity of these sequences with the species already deposited in the referenced database, and then multiple sequences were aligned using version 2.0 of the ClustalX program. According to the results of the multiple alignments of all sequences obtained, it was possible to observe the differences between the T. pretiosum, T. galloi and T. exiguum species. It was concluded that using the sequences of the ITS2 region of the ribosomal DNA was efficient in the differentiation of the studied Trichogramma species, which suggests a strong inter-specific variation among species.
publishDate 2015
dc.date.none.fl_str_mv 2015
2016-03-22T11:11:11Z
2016-03-22T11:11:11Z
2016-03-22
2016-03-22T11:11:11Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Brazilian Journal of Biology, v. 75, n. 2, p. 391-395, 2015.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1041586
identifier_str_mv Brazilian Journal of Biology, v. 75, n. 2, p. 391-395, 2015.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1041586
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
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