Isolation of novel microsatellite markers for tambaqui (Colossoma macropomum, Cuvier 1818), an important freshwater fish of the Amazon.

Detalhes bibliográficos
Autor(a) principal: SANTANA, G. X.
Data de Publicação: 2012
Outros Autores: SANTOS, C. H. A., SOUSA, C. F. S., NASCIMENTO, P. R. M., PAULA-SILVA, M. N., SOUSA, A. C. B., CAMPOS, T. de, ALMEIDA-VAL, V. M. F.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/930387
Resumo: Colossoma macropomum is an endemic species from Amazon basin. It is widely commercialized as food, becoming one of the main items in Amazonian fisheries. Despite its economic importance, genetic information of small captivity populations is not currently available. The present contribution describes 14 new microsatellite loci used to analyze 30 individuals of C. macropomum. The number of alleles for each locus ranged from 4 to 24. The observed (Ho) and expected (HE) heterozygosity values ranged from 0.318 to 1.000 and 0.729 to 0.949, respectively. Out of 14 polymorphic loci, nine did not deviate from Hardy-Weinberg Equilibrium after Bonferroni correction. These new microsatellite loci will contribute towards the genetic of small artificial populations, as well as pedigree control of fish farms of C. macropomum.
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spelling Isolation of novel microsatellite markers for tambaqui (Colossoma macropomum, Cuvier 1818), an important freshwater fish of the Amazon.Marcador microssatélitePez de agua dulceRepeticiones de microsatéliteVariación genéticaPeixe de água doceTambaquiColossoma macropomumVariação genéticaMarcador genéticoColossomaFreshwater fishGenetic variationMicrosatellite repeatsColossoma macropomum is an endemic species from Amazon basin. It is widely commercialized as food, becoming one of the main items in Amazonian fisheries. Despite its economic importance, genetic information of small captivity populations is not currently available. The present contribution describes 14 new microsatellite loci used to analyze 30 individuals of C. macropomum. The number of alleles for each locus ranged from 4 to 24. The observed (Ho) and expected (HE) heterozygosity values ranged from 0.318 to 1.000 and 0.729 to 0.949, respectively. Out of 14 polymorphic loci, nine did not deviate from Hardy-Weinberg Equilibrium after Bonferroni correction. These new microsatellite loci will contribute towards the genetic of small artificial populations, as well as pedigree control of fish farms of C. macropomum.INPA; INPA; INPA; INPA; INPA; UNIVERSIDADE DO ESTADO DA BAHIA; TATIANA DE CAMPOS, CPAF-AC; INPA.SANTANA, G. X.SANTOS, C. H. A.SOUSA, C. F. S.NASCIMENTO, P. R. M.PAULA-SILVA, M. N.SOUSA, A. C. B.CAMPOS, T. deALMEIDA-VAL, V. M. F.2012-08-03T11:11:11Z2012-08-03T11:11:11Z2012-08-0320122019-01-10T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleConservation Genetic Resource, v. 4, n. 1, p. 197-200, Mar. 2012.http://www.alice.cnptia.embrapa.br/alice/handle/doc/93038710.1007/s12686-011-9507-3enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-16T04:28:26Zoai:www.alice.cnptia.embrapa.br:doc/930387Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542017-08-16T04:28:26falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-16T04:28:26Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Isolation of novel microsatellite markers for tambaqui (Colossoma macropomum, Cuvier 1818), an important freshwater fish of the Amazon.
title Isolation of novel microsatellite markers for tambaqui (Colossoma macropomum, Cuvier 1818), an important freshwater fish of the Amazon.
spellingShingle Isolation of novel microsatellite markers for tambaqui (Colossoma macropomum, Cuvier 1818), an important freshwater fish of the Amazon.
SANTANA, G. X.
Marcador microssatélite
Pez de agua dulce
Repeticiones de microsatélite
Variación genética
Peixe de água doce
Tambaqui
Colossoma macropomum
Variação genética
Marcador genético
Colossoma
Freshwater fish
Genetic variation
Microsatellite repeats
title_short Isolation of novel microsatellite markers for tambaqui (Colossoma macropomum, Cuvier 1818), an important freshwater fish of the Amazon.
title_full Isolation of novel microsatellite markers for tambaqui (Colossoma macropomum, Cuvier 1818), an important freshwater fish of the Amazon.
title_fullStr Isolation of novel microsatellite markers for tambaqui (Colossoma macropomum, Cuvier 1818), an important freshwater fish of the Amazon.
title_full_unstemmed Isolation of novel microsatellite markers for tambaqui (Colossoma macropomum, Cuvier 1818), an important freshwater fish of the Amazon.
title_sort Isolation of novel microsatellite markers for tambaqui (Colossoma macropomum, Cuvier 1818), an important freshwater fish of the Amazon.
author SANTANA, G. X.
author_facet SANTANA, G. X.
SANTOS, C. H. A.
SOUSA, C. F. S.
NASCIMENTO, P. R. M.
PAULA-SILVA, M. N.
SOUSA, A. C. B.
CAMPOS, T. de
ALMEIDA-VAL, V. M. F.
author_role author
author2 SANTOS, C. H. A.
SOUSA, C. F. S.
NASCIMENTO, P. R. M.
PAULA-SILVA, M. N.
SOUSA, A. C. B.
CAMPOS, T. de
ALMEIDA-VAL, V. M. F.
author2_role author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv INPA; INPA; INPA; INPA; INPA; UNIVERSIDADE DO ESTADO DA BAHIA; TATIANA DE CAMPOS, CPAF-AC; INPA.
dc.contributor.author.fl_str_mv SANTANA, G. X.
SANTOS, C. H. A.
SOUSA, C. F. S.
NASCIMENTO, P. R. M.
PAULA-SILVA, M. N.
SOUSA, A. C. B.
CAMPOS, T. de
ALMEIDA-VAL, V. M. F.
dc.subject.por.fl_str_mv Marcador microssatélite
Pez de agua dulce
Repeticiones de microsatélite
Variación genética
Peixe de água doce
Tambaqui
Colossoma macropomum
Variação genética
Marcador genético
Colossoma
Freshwater fish
Genetic variation
Microsatellite repeats
topic Marcador microssatélite
Pez de agua dulce
Repeticiones de microsatélite
Variación genética
Peixe de água doce
Tambaqui
Colossoma macropomum
Variação genética
Marcador genético
Colossoma
Freshwater fish
Genetic variation
Microsatellite repeats
description Colossoma macropomum is an endemic species from Amazon basin. It is widely commercialized as food, becoming one of the main items in Amazonian fisheries. Despite its economic importance, genetic information of small captivity populations is not currently available. The present contribution describes 14 new microsatellite loci used to analyze 30 individuals of C. macropomum. The number of alleles for each locus ranged from 4 to 24. The observed (Ho) and expected (HE) heterozygosity values ranged from 0.318 to 1.000 and 0.729 to 0.949, respectively. Out of 14 polymorphic loci, nine did not deviate from Hardy-Weinberg Equilibrium after Bonferroni correction. These new microsatellite loci will contribute towards the genetic of small artificial populations, as well as pedigree control of fish farms of C. macropomum.
publishDate 2012
dc.date.none.fl_str_mv 2012-08-03T11:11:11Z
2012-08-03T11:11:11Z
2012-08-03
2012
2019-01-10T11:11:11Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Conservation Genetic Resource, v. 4, n. 1, p. 197-200, Mar. 2012.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/930387
10.1007/s12686-011-9507-3
identifier_str_mv Conservation Genetic Resource, v. 4, n. 1, p. 197-200, Mar. 2012.
10.1007/s12686-011-9507-3
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/930387
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
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