InsectCV: a system for insect detection in the lab from trap images.

Detalhes bibliográficos
Autor(a) principal: CESARO JÚNIOR, T. de
Data de Publicação: 2021
Outros Autores: RIEDER, R., DI DOMÊNICO, J. R., LAU, D.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1137367
Resumo: Advances in artificial intelligence, computer vision, and high-performance computing have enabled the creation of efficient solutions to monitor pests and identify plant diseases. In this context, we present InsectCV, a system for automatic insect detection in the lab from scanned trap images. This study considered the use of Moericke-type traps to capture insects in outdoor environments. Each sample can contain hundreds of insects of interest, such as aphids, parasitoids, thrips, and flies. The presence of debris, superimposed objects, and insects in varied poses is also common. To develop this solution, we used a set of 209 grayscale images containing 17,908 labeled insects. We applied the Mask R-CNN method to generate the model and created three web services for the image inference. The model training contemplated transfer learning and data augmentation techniques. This approach defined two new parameters to adjust the ratio of false positive by class, and change the lengths of the anchor side of the Region Proposal Network, improving the accuracy in the detection of small objects. The model validation used a total of 580 images obtained from field exposed traps located at Coxilha, and Passo Fundo, north of Rio Grande do Sul State, during wheat crop season in 2019 and 2020. Compared to manual counting, the coefficients of determination (R2 = 0.81 for aphids and R2 = 0.78 for parasitoids) show a good-fitting model to identify the fluctuation of population levels for these insects, presenting tiny deviations of the growth curve in the initial phases, and in the maintenance of the curve shape. In samples with hundreds of insects and debris that generate more connections or overlaps, model performance was affected due to the increase in false negatives. Comparative tests between InsectCV and manual counting performed by a specialist suggest that the system is sufficiently accurate to guide warning systems for integrated pest management of aphids. We also discussed the implications of adopting this tool and the gaps that require further development. Keywords: Convolutional neural network; Mask r-cnn; Object detection; Pest detection; Aphids; Warning systems
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spelling InsectCV: a system for insect detection in the lab from trap images.Convolutional neural networkMask r-cnnObject detectionPest detectionAphidsWarning systemsAdvances in artificial intelligence, computer vision, and high-performance computing have enabled the creation of efficient solutions to monitor pests and identify plant diseases. In this context, we present InsectCV, a system for automatic insect detection in the lab from scanned trap images. This study considered the use of Moericke-type traps to capture insects in outdoor environments. Each sample can contain hundreds of insects of interest, such as aphids, parasitoids, thrips, and flies. The presence of debris, superimposed objects, and insects in varied poses is also common. To develop this solution, we used a set of 209 grayscale images containing 17,908 labeled insects. We applied the Mask R-CNN method to generate the model and created three web services for the image inference. The model training contemplated transfer learning and data augmentation techniques. This approach defined two new parameters to adjust the ratio of false positive by class, and change the lengths of the anchor side of the Region Proposal Network, improving the accuracy in the detection of small objects. The model validation used a total of 580 images obtained from field exposed traps located at Coxilha, and Passo Fundo, north of Rio Grande do Sul State, during wheat crop season in 2019 and 2020. Compared to manual counting, the coefficients of determination (R2 = 0.81 for aphids and R2 = 0.78 for parasitoids) show a good-fitting model to identify the fluctuation of population levels for these insects, presenting tiny deviations of the growth curve in the initial phases, and in the maintenance of the curve shape. In samples with hundreds of insects and debris that generate more connections or overlaps, model performance was affected due to the increase in false negatives. Comparative tests between InsectCV and manual counting performed by a specialist suggest that the system is sufficiently accurate to guide warning systems for integrated pest management of aphids. We also discussed the implications of adopting this tool and the gaps that require further development. Keywords: Convolutional neural network; Mask r-cnn; Object detection; Pest detection; Aphids; Warning systemsTELMO DE CESARO JÚNIOR, Sul-rio-grandense Federal Institute of Education, Science and Technology (IFSul) – Passo Fundo – RS – BrazilRAFAEL RIEDER, University of Passo Fundo (UPF) – Passo Fundo – RS – BrazilJÉSSICA REGINA DI DOMÊNICO, Sul-rio-grandense Federal Institute of Education, Science and Technology (IFSul) – Passo Fundo – RS – BrazilDOUGLAS LAU, CNPT.CESARO JÚNIOR, T. deRIEDER, R.DI DOMÊNICO, J. R.LAU, D.2021-12-12T02:16:30Z2021-12-12T02:16:30Z2021-12-092021info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleEcological Informatics, e101516, Dec. 2021.http://www.alice.cnptia.embrapa.br/alice/handle/doc/1137367enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2021-12-12T02:16:40Zoai:www.alice.cnptia.embrapa.br:doc/1137367Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542021-12-12T02:16:40falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542021-12-12T02:16:40Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv InsectCV: a system for insect detection in the lab from trap images.
title InsectCV: a system for insect detection in the lab from trap images.
spellingShingle InsectCV: a system for insect detection in the lab from trap images.
CESARO JÚNIOR, T. de
Convolutional neural network
Mask r-cnn
Object detection
Pest detection
Aphids
Warning systems
title_short InsectCV: a system for insect detection in the lab from trap images.
title_full InsectCV: a system for insect detection in the lab from trap images.
title_fullStr InsectCV: a system for insect detection in the lab from trap images.
title_full_unstemmed InsectCV: a system for insect detection in the lab from trap images.
title_sort InsectCV: a system for insect detection in the lab from trap images.
author CESARO JÚNIOR, T. de
author_facet CESARO JÚNIOR, T. de
RIEDER, R.
DI DOMÊNICO, J. R.
LAU, D.
author_role author
author2 RIEDER, R.
DI DOMÊNICO, J. R.
LAU, D.
author2_role author
author
author
dc.contributor.none.fl_str_mv TELMO DE CESARO JÚNIOR, Sul-rio-grandense Federal Institute of Education, Science and Technology (IFSul) – Passo Fundo – RS – Brazil
RAFAEL RIEDER, University of Passo Fundo (UPF) – Passo Fundo – RS – Brazil
JÉSSICA REGINA DI DOMÊNICO, Sul-rio-grandense Federal Institute of Education, Science and Technology (IFSul) – Passo Fundo – RS – Brazil
DOUGLAS LAU, CNPT.
dc.contributor.author.fl_str_mv CESARO JÚNIOR, T. de
RIEDER, R.
DI DOMÊNICO, J. R.
LAU, D.
dc.subject.por.fl_str_mv Convolutional neural network
Mask r-cnn
Object detection
Pest detection
Aphids
Warning systems
topic Convolutional neural network
Mask r-cnn
Object detection
Pest detection
Aphids
Warning systems
description Advances in artificial intelligence, computer vision, and high-performance computing have enabled the creation of efficient solutions to monitor pests and identify plant diseases. In this context, we present InsectCV, a system for automatic insect detection in the lab from scanned trap images. This study considered the use of Moericke-type traps to capture insects in outdoor environments. Each sample can contain hundreds of insects of interest, such as aphids, parasitoids, thrips, and flies. The presence of debris, superimposed objects, and insects in varied poses is also common. To develop this solution, we used a set of 209 grayscale images containing 17,908 labeled insects. We applied the Mask R-CNN method to generate the model and created three web services for the image inference. The model training contemplated transfer learning and data augmentation techniques. This approach defined two new parameters to adjust the ratio of false positive by class, and change the lengths of the anchor side of the Region Proposal Network, improving the accuracy in the detection of small objects. The model validation used a total of 580 images obtained from field exposed traps located at Coxilha, and Passo Fundo, north of Rio Grande do Sul State, during wheat crop season in 2019 and 2020. Compared to manual counting, the coefficients of determination (R2 = 0.81 for aphids and R2 = 0.78 for parasitoids) show a good-fitting model to identify the fluctuation of population levels for these insects, presenting tiny deviations of the growth curve in the initial phases, and in the maintenance of the curve shape. In samples with hundreds of insects and debris that generate more connections or overlaps, model performance was affected due to the increase in false negatives. Comparative tests between InsectCV and manual counting performed by a specialist suggest that the system is sufficiently accurate to guide warning systems for integrated pest management of aphids. We also discussed the implications of adopting this tool and the gaps that require further development. Keywords: Convolutional neural network; Mask r-cnn; Object detection; Pest detection; Aphids; Warning systems
publishDate 2021
dc.date.none.fl_str_mv 2021-12-12T02:16:30Z
2021-12-12T02:16:30Z
2021-12-09
2021
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Ecological Informatics, e101516, Dec. 2021.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1137367
identifier_str_mv Ecological Informatics, e101516, Dec. 2021.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1137367
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
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