Genetic variability in Mediterranean buffalos evaluated by pedigree analysis.
Autor(a) principal: | |
---|---|
Data de Publicação: | 2012 |
Outros Autores: | , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
Texto Completo: | http://www.alice.cnptia.embrapa.br/alice/handle/doc/950105 |
Resumo: | The objective of this research was to study the population genetic structure of four herds of Mediterranean buffaloes in Brazil. It was used pedigree data from 6,588 buffaloes of Mediterranean breed born from 1980 to 2002. Of the total number of animals studied, 60.5, 15.3 and 2.1% had a pedigree in the first, second and third ascendancy, respectively. The effective number of herds that provided breeding males was 1.60 for parents, 1.16 for grandparents and 1.00 for greatgrandparents. There were 923 founder animals and only 71 effective founders. The effective number of ancestors explaining the genetic variability of the population was 71 and only 30 ancestors accounted for 50% of the genetic variability of the population. The average relatedness coefficient (AR) between individuals and inbreeding (F) of the population were estimated at 0.37 and 0.34% respectively. The average estimate of generation interval was 8.71±2.85 years. The variability of the current population is the result of a few ancestors, who are mostly also founders showing that the population was developed from a narrow genetic base which characterizes the occurrence of founder effect. |
id |
EMBR_14d791d25a1cac0f64d0de60ca87ae04 |
---|---|
oai_identifier_str |
oai:www.alice.cnptia.embrapa.br:doc/950105 |
network_acronym_str |
EMBR |
network_name_str |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
repository_id_str |
2154 |
spelling |
Genetic variability in Mediterranean buffalos evaluated by pedigree analysis.Variabilidade genética na raça bubalina Mediterrânea avaliada por meio de análise de pedigree.Estrutura genética populacionalFundadoresAncestraisBubalus BubalisEndogamiaThe objective of this research was to study the population genetic structure of four herds of Mediterranean buffaloes in Brazil. It was used pedigree data from 6,588 buffaloes of Mediterranean breed born from 1980 to 2002. Of the total number of animals studied, 60.5, 15.3 and 2.1% had a pedigree in the first, second and third ascendancy, respectively. The effective number of herds that provided breeding males was 1.60 for parents, 1.16 for grandparents and 1.00 for greatgrandparents. There were 923 founder animals and only 71 effective founders. The effective number of ancestors explaining the genetic variability of the population was 71 and only 30 ancestors accounted for 50% of the genetic variability of the population. The average relatedness coefficient (AR) between individuals and inbreeding (F) of the population were estimated at 0.37 and 0.34% respectively. The average estimate of generation interval was 8.71±2.85 years. The variability of the current population is the result of a few ancestors, who are mostly also founders showing that the population was developed from a narrow genetic base which characterizes the occurrence of founder effect.MILTON REZENDE TEIXEIRA NETO, UESB; JURANDIR FERREIRA DA CRUZ, UESB; ALCIDES AMORIM RAMOS, UNESP, Botucatu, SP, Brasil; PAULO LUIZ SOUZA CARNEIRO, UESB; DANIELLE MARIA MACHADO R AZEVEDO, CPAMN; RICCARDO BOZZI, UNIVERSITÀ DEGLI STUDI DI FIRENZE. VIA DELLE CASCINE, FIRENZE, ITALY; CARLOS HENRIQUE MENDES MALHADO, UESB.TEIXEIRA NETO, M. R.CRUZ, J. F. daRAMOS, A. A.CARNEIRO, P. L. S.AZEVEDO, D. M. M. R.BOZZI, R.MALHADO, C. H. M.2013-02-20T11:11:11Z2013-02-20T11:11:11Z2013-02-2020122013-02-20T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleCiência Rural, Santa Maria, v. 42, n. 11, p. 2037-2042, nov. 2012.0103-8478http://www.alice.cnptia.embrapa.br/alice/handle/doc/950105enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-15T22:32:02Zoai:www.alice.cnptia.embrapa.br:doc/950105Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542017-08-15T22:32:02falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-15T22:32:02Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false |
dc.title.none.fl_str_mv |
Genetic variability in Mediterranean buffalos evaluated by pedigree analysis. Variabilidade genética na raça bubalina Mediterrânea avaliada por meio de análise de pedigree. |
title |
Genetic variability in Mediterranean buffalos evaluated by pedigree analysis. |
spellingShingle |
Genetic variability in Mediterranean buffalos evaluated by pedigree analysis. TEIXEIRA NETO, M. R. Estrutura genética populacional Fundadores Ancestrais Bubalus Bubalis Endogamia |
title_short |
Genetic variability in Mediterranean buffalos evaluated by pedigree analysis. |
title_full |
Genetic variability in Mediterranean buffalos evaluated by pedigree analysis. |
title_fullStr |
Genetic variability in Mediterranean buffalos evaluated by pedigree analysis. |
title_full_unstemmed |
Genetic variability in Mediterranean buffalos evaluated by pedigree analysis. |
title_sort |
Genetic variability in Mediterranean buffalos evaluated by pedigree analysis. |
author |
TEIXEIRA NETO, M. R. |
author_facet |
TEIXEIRA NETO, M. R. CRUZ, J. F. da RAMOS, A. A. CARNEIRO, P. L. S. AZEVEDO, D. M. M. R. BOZZI, R. MALHADO, C. H. M. |
author_role |
author |
author2 |
CRUZ, J. F. da RAMOS, A. A. CARNEIRO, P. L. S. AZEVEDO, D. M. M. R. BOZZI, R. MALHADO, C. H. M. |
author2_role |
author author author author author author |
dc.contributor.none.fl_str_mv |
MILTON REZENDE TEIXEIRA NETO, UESB; JURANDIR FERREIRA DA CRUZ, UESB; ALCIDES AMORIM RAMOS, UNESP, Botucatu, SP, Brasil; PAULO LUIZ SOUZA CARNEIRO, UESB; DANIELLE MARIA MACHADO R AZEVEDO, CPAMN; RICCARDO BOZZI, UNIVERSITÀ DEGLI STUDI DI FIRENZE. VIA DELLE CASCINE, FIRENZE, ITALY; CARLOS HENRIQUE MENDES MALHADO, UESB. |
dc.contributor.author.fl_str_mv |
TEIXEIRA NETO, M. R. CRUZ, J. F. da RAMOS, A. A. CARNEIRO, P. L. S. AZEVEDO, D. M. M. R. BOZZI, R. MALHADO, C. H. M. |
dc.subject.por.fl_str_mv |
Estrutura genética populacional Fundadores Ancestrais Bubalus Bubalis Endogamia |
topic |
Estrutura genética populacional Fundadores Ancestrais Bubalus Bubalis Endogamia |
description |
The objective of this research was to study the population genetic structure of four herds of Mediterranean buffaloes in Brazil. It was used pedigree data from 6,588 buffaloes of Mediterranean breed born from 1980 to 2002. Of the total number of animals studied, 60.5, 15.3 and 2.1% had a pedigree in the first, second and third ascendancy, respectively. The effective number of herds that provided breeding males was 1.60 for parents, 1.16 for grandparents and 1.00 for greatgrandparents. There were 923 founder animals and only 71 effective founders. The effective number of ancestors explaining the genetic variability of the population was 71 and only 30 ancestors accounted for 50% of the genetic variability of the population. The average relatedness coefficient (AR) between individuals and inbreeding (F) of the population were estimated at 0.37 and 0.34% respectively. The average estimate of generation interval was 8.71±2.85 years. The variability of the current population is the result of a few ancestors, who are mostly also founders showing that the population was developed from a narrow genetic base which characterizes the occurrence of founder effect. |
publishDate |
2012 |
dc.date.none.fl_str_mv |
2012 2013-02-20T11:11:11Z 2013-02-20T11:11:11Z 2013-02-20 2013-02-20T11:11:11Z |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/publishedVersion info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
Ciência Rural, Santa Maria, v. 42, n. 11, p. 2037-2042, nov. 2012. 0103-8478 http://www.alice.cnptia.embrapa.br/alice/handle/doc/950105 |
identifier_str_mv |
Ciência Rural, Santa Maria, v. 42, n. 11, p. 2037-2042, nov. 2012. 0103-8478 |
url |
http://www.alice.cnptia.embrapa.br/alice/handle/doc/950105 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa) instacron:EMBRAPA |
instname_str |
Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
instacron_str |
EMBRAPA |
institution |
EMBRAPA |
reponame_str |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
collection |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
repository.name.fl_str_mv |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
repository.mail.fl_str_mv |
cg-riaa@embrapa.br |
_version_ |
1794503375749906432 |