Molecular characterization and phylogenetic assessment of agricultural-related noctuids (Lepidoptera: Noctuidae) of South America.

Detalhes bibliográficos
Autor(a) principal: SAN BLAS, G.
Data de Publicação: 2021
Outros Autores: BAUDINO, E. M., DIAS, F. M. S., DOLIBAINA, D. R., SPECHT, A., CASAGRANDE, M. M., CORNEJO, P., GIRAUDO, W. G., MIELKE, O. H. H.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1143362
Resumo: Accurate identification of species is fundamental to every biological research. While morphological identification is a time-consuming and skilled technique, straightforward molecular techniques require the availability of a database of previously sequenced and identified specimens. For most countries of South America, species of noctuids with available sequences are scarce, mostly restricted to species of economic importance, making molecular identification untenable. Here we sequenced the mitochondrial DNA ?barcode? region of the cytochrome c oxidase subunit I gene of 34 specimens pertaining to 26 species of South American noctuids, 20 of these for the first time. For all species, genetic distances were higher for interspecific than for intraspecific relations, supporting the utility of DNA ?barcodes? to identify species. Larger intraspecific divergences occurred in species of Agrotis and Anicla, and interspecific divergences lower than 2% occurred in about one fifth of the species, all in species of Agrotis, Feltia, and Anicla. These results will allow identifying these species using DNA ?barcodes?, either for pest management or general biological studies. Furthermore, we carried out phylogenetic analyses with those sequences and 158 other sequences of 85 species of noctuids mined from GenBank. These analyses, in every case, grouped species of the same genus suggesting that the DNA ?barcodes? region alone can be useful for lower level phylogeny in this group, recovering as monophyletic groups such as Copitarsia, Agrotis and Austrandesiita. Conversely, groups such as Mythimna (Mythimna) and the subgenera of Feltia were not recovered as monophyletic, suggesting the need for further taxonomic studies in these groups.
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spelling Molecular characterization and phylogenetic assessment of agricultural-related noctuids (Lepidoptera: Noctuidae) of South America.Códigos de barra de DNAIdentificação de espéciesIdentificação morfológicaAgrotis sppIdentificaçãoEspécieDNAAccurate identification of species is fundamental to every biological research. While morphological identification is a time-consuming and skilled technique, straightforward molecular techniques require the availability of a database of previously sequenced and identified specimens. For most countries of South America, species of noctuids with available sequences are scarce, mostly restricted to species of economic importance, making molecular identification untenable. Here we sequenced the mitochondrial DNA ?barcode? region of the cytochrome c oxidase subunit I gene of 34 specimens pertaining to 26 species of South American noctuids, 20 of these for the first time. For all species, genetic distances were higher for interspecific than for intraspecific relations, supporting the utility of DNA ?barcodes? to identify species. Larger intraspecific divergences occurred in species of Agrotis and Anicla, and interspecific divergences lower than 2% occurred in about one fifth of the species, all in species of Agrotis, Feltia, and Anicla. These results will allow identifying these species using DNA ?barcodes?, either for pest management or general biological studies. Furthermore, we carried out phylogenetic analyses with those sequences and 158 other sequences of 85 species of noctuids mined from GenBank. These analyses, in every case, grouped species of the same genus suggesting that the DNA ?barcodes? region alone can be useful for lower level phylogeny in this group, recovering as monophyletic groups such as Copitarsia, Agrotis and Austrandesiita. Conversely, groups such as Mythimna (Mythimna) and the subgenera of Feltia were not recovered as monophyletic, suggesting the need for further taxonomic studies in these groups.GERMAN SAN BLAS; ESTELA MARIS BAUDINO; FERNANDO MAIA SILVA DIAS; DIEGO RODRIGO DOLIBAINA; ALEXANDRE SPECHT, CPAC; MIRNA MARTINS CASAGRANDE; PAULA CORNEJO; WALTER GUILLOT GIRAUDO; OLAF HERMANN HENDRIK MIELKE.SAN BLAS, G.BAUDINO, E. M.DIAS, F. M. S.DOLIBAINA, D. R.SPECHT, A.CASAGRANDE, M. M.CORNEJO, P.GIRAUDO, W. G.MIELKE, O. H. H.2022-05-24T05:02:12Z2022-05-24T05:02:12Z2022-05-232021info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleRevista Brasileira de Entomologia, v. 65, n. 4, e20210104, 2021.http://www.alice.cnptia.embrapa.br/alice/handle/doc/1143362enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2022-05-24T05:02:20Zoai:www.alice.cnptia.embrapa.br:doc/1143362Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542022-05-24T05:02:20falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542022-05-24T05:02:20Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Molecular characterization and phylogenetic assessment of agricultural-related noctuids (Lepidoptera: Noctuidae) of South America.
title Molecular characterization and phylogenetic assessment of agricultural-related noctuids (Lepidoptera: Noctuidae) of South America.
spellingShingle Molecular characterization and phylogenetic assessment of agricultural-related noctuids (Lepidoptera: Noctuidae) of South America.
SAN BLAS, G.
Códigos de barra de DNA
Identificação de espécies
Identificação morfológica
Agrotis spp
Identificação
Espécie
DNA
title_short Molecular characterization and phylogenetic assessment of agricultural-related noctuids (Lepidoptera: Noctuidae) of South America.
title_full Molecular characterization and phylogenetic assessment of agricultural-related noctuids (Lepidoptera: Noctuidae) of South America.
title_fullStr Molecular characterization and phylogenetic assessment of agricultural-related noctuids (Lepidoptera: Noctuidae) of South America.
title_full_unstemmed Molecular characterization and phylogenetic assessment of agricultural-related noctuids (Lepidoptera: Noctuidae) of South America.
title_sort Molecular characterization and phylogenetic assessment of agricultural-related noctuids (Lepidoptera: Noctuidae) of South America.
author SAN BLAS, G.
author_facet SAN BLAS, G.
BAUDINO, E. M.
DIAS, F. M. S.
DOLIBAINA, D. R.
SPECHT, A.
CASAGRANDE, M. M.
CORNEJO, P.
GIRAUDO, W. G.
MIELKE, O. H. H.
author_role author
author2 BAUDINO, E. M.
DIAS, F. M. S.
DOLIBAINA, D. R.
SPECHT, A.
CASAGRANDE, M. M.
CORNEJO, P.
GIRAUDO, W. G.
MIELKE, O. H. H.
author2_role author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv GERMAN SAN BLAS; ESTELA MARIS BAUDINO; FERNANDO MAIA SILVA DIAS; DIEGO RODRIGO DOLIBAINA; ALEXANDRE SPECHT, CPAC; MIRNA MARTINS CASAGRANDE; PAULA CORNEJO; WALTER GUILLOT GIRAUDO; OLAF HERMANN HENDRIK MIELKE.
dc.contributor.author.fl_str_mv SAN BLAS, G.
BAUDINO, E. M.
DIAS, F. M. S.
DOLIBAINA, D. R.
SPECHT, A.
CASAGRANDE, M. M.
CORNEJO, P.
GIRAUDO, W. G.
MIELKE, O. H. H.
dc.subject.por.fl_str_mv Códigos de barra de DNA
Identificação de espécies
Identificação morfológica
Agrotis spp
Identificação
Espécie
DNA
topic Códigos de barra de DNA
Identificação de espécies
Identificação morfológica
Agrotis spp
Identificação
Espécie
DNA
description Accurate identification of species is fundamental to every biological research. While morphological identification is a time-consuming and skilled technique, straightforward molecular techniques require the availability of a database of previously sequenced and identified specimens. For most countries of South America, species of noctuids with available sequences are scarce, mostly restricted to species of economic importance, making molecular identification untenable. Here we sequenced the mitochondrial DNA ?barcode? region of the cytochrome c oxidase subunit I gene of 34 specimens pertaining to 26 species of South American noctuids, 20 of these for the first time. For all species, genetic distances were higher for interspecific than for intraspecific relations, supporting the utility of DNA ?barcodes? to identify species. Larger intraspecific divergences occurred in species of Agrotis and Anicla, and interspecific divergences lower than 2% occurred in about one fifth of the species, all in species of Agrotis, Feltia, and Anicla. These results will allow identifying these species using DNA ?barcodes?, either for pest management or general biological studies. Furthermore, we carried out phylogenetic analyses with those sequences and 158 other sequences of 85 species of noctuids mined from GenBank. These analyses, in every case, grouped species of the same genus suggesting that the DNA ?barcodes? region alone can be useful for lower level phylogeny in this group, recovering as monophyletic groups such as Copitarsia, Agrotis and Austrandesiita. Conversely, groups such as Mythimna (Mythimna) and the subgenera of Feltia were not recovered as monophyletic, suggesting the need for further taxonomic studies in these groups.
publishDate 2021
dc.date.none.fl_str_mv 2021
2022-05-24T05:02:12Z
2022-05-24T05:02:12Z
2022-05-23
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Revista Brasileira de Entomologia, v. 65, n. 4, e20210104, 2021.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1143362
identifier_str_mv Revista Brasileira de Entomologia, v. 65, n. 4, e20210104, 2021.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1143362
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
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