Molecular characterization and phylogenetic assessment of agricultural-related noctuids (Lepidoptera: Noctuidae) of South America.
Autor(a) principal: | |
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Data de Publicação: | 2021 |
Outros Autores: | , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
Texto Completo: | http://www.alice.cnptia.embrapa.br/alice/handle/doc/1143362 |
Resumo: | Accurate identification of species is fundamental to every biological research. While morphological identification is a time-consuming and skilled technique, straightforward molecular techniques require the availability of a database of previously sequenced and identified specimens. For most countries of South America, species of noctuids with available sequences are scarce, mostly restricted to species of economic importance, making molecular identification untenable. Here we sequenced the mitochondrial DNA ?barcode? region of the cytochrome c oxidase subunit I gene of 34 specimens pertaining to 26 species of South American noctuids, 20 of these for the first time. For all species, genetic distances were higher for interspecific than for intraspecific relations, supporting the utility of DNA ?barcodes? to identify species. Larger intraspecific divergences occurred in species of Agrotis and Anicla, and interspecific divergences lower than 2% occurred in about one fifth of the species, all in species of Agrotis, Feltia, and Anicla. These results will allow identifying these species using DNA ?barcodes?, either for pest management or general biological studies. Furthermore, we carried out phylogenetic analyses with those sequences and 158 other sequences of 85 species of noctuids mined from GenBank. These analyses, in every case, grouped species of the same genus suggesting that the DNA ?barcodes? region alone can be useful for lower level phylogeny in this group, recovering as monophyletic groups such as Copitarsia, Agrotis and Austrandesiita. Conversely, groups such as Mythimna (Mythimna) and the subgenera of Feltia were not recovered as monophyletic, suggesting the need for further taxonomic studies in these groups. |
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Molecular characterization and phylogenetic assessment of agricultural-related noctuids (Lepidoptera: Noctuidae) of South America.Códigos de barra de DNAIdentificação de espéciesIdentificação morfológicaAgrotis sppIdentificaçãoEspécieDNAAccurate identification of species is fundamental to every biological research. While morphological identification is a time-consuming and skilled technique, straightforward molecular techniques require the availability of a database of previously sequenced and identified specimens. For most countries of South America, species of noctuids with available sequences are scarce, mostly restricted to species of economic importance, making molecular identification untenable. Here we sequenced the mitochondrial DNA ?barcode? region of the cytochrome c oxidase subunit I gene of 34 specimens pertaining to 26 species of South American noctuids, 20 of these for the first time. For all species, genetic distances were higher for interspecific than for intraspecific relations, supporting the utility of DNA ?barcodes? to identify species. Larger intraspecific divergences occurred in species of Agrotis and Anicla, and interspecific divergences lower than 2% occurred in about one fifth of the species, all in species of Agrotis, Feltia, and Anicla. These results will allow identifying these species using DNA ?barcodes?, either for pest management or general biological studies. Furthermore, we carried out phylogenetic analyses with those sequences and 158 other sequences of 85 species of noctuids mined from GenBank. These analyses, in every case, grouped species of the same genus suggesting that the DNA ?barcodes? region alone can be useful for lower level phylogeny in this group, recovering as monophyletic groups such as Copitarsia, Agrotis and Austrandesiita. Conversely, groups such as Mythimna (Mythimna) and the subgenera of Feltia were not recovered as monophyletic, suggesting the need for further taxonomic studies in these groups.GERMAN SAN BLAS; ESTELA MARIS BAUDINO; FERNANDO MAIA SILVA DIAS; DIEGO RODRIGO DOLIBAINA; ALEXANDRE SPECHT, CPAC; MIRNA MARTINS CASAGRANDE; PAULA CORNEJO; WALTER GUILLOT GIRAUDO; OLAF HERMANN HENDRIK MIELKE.SAN BLAS, G.BAUDINO, E. M.DIAS, F. M. S.DOLIBAINA, D. R.SPECHT, A.CASAGRANDE, M. M.CORNEJO, P.GIRAUDO, W. G.MIELKE, O. H. H.2022-05-24T05:02:12Z2022-05-24T05:02:12Z2022-05-232021info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleRevista Brasileira de Entomologia, v. 65, n. 4, e20210104, 2021.http://www.alice.cnptia.embrapa.br/alice/handle/doc/1143362enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2022-05-24T05:02:20Zoai:www.alice.cnptia.embrapa.br:doc/1143362Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542022-05-24T05:02:20falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542022-05-24T05:02:20Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false |
dc.title.none.fl_str_mv |
Molecular characterization and phylogenetic assessment of agricultural-related noctuids (Lepidoptera: Noctuidae) of South America. |
title |
Molecular characterization and phylogenetic assessment of agricultural-related noctuids (Lepidoptera: Noctuidae) of South America. |
spellingShingle |
Molecular characterization and phylogenetic assessment of agricultural-related noctuids (Lepidoptera: Noctuidae) of South America. SAN BLAS, G. Códigos de barra de DNA Identificação de espécies Identificação morfológica Agrotis spp Identificação Espécie DNA |
title_short |
Molecular characterization and phylogenetic assessment of agricultural-related noctuids (Lepidoptera: Noctuidae) of South America. |
title_full |
Molecular characterization and phylogenetic assessment of agricultural-related noctuids (Lepidoptera: Noctuidae) of South America. |
title_fullStr |
Molecular characterization and phylogenetic assessment of agricultural-related noctuids (Lepidoptera: Noctuidae) of South America. |
title_full_unstemmed |
Molecular characterization and phylogenetic assessment of agricultural-related noctuids (Lepidoptera: Noctuidae) of South America. |
title_sort |
Molecular characterization and phylogenetic assessment of agricultural-related noctuids (Lepidoptera: Noctuidae) of South America. |
author |
SAN BLAS, G. |
author_facet |
SAN BLAS, G. BAUDINO, E. M. DIAS, F. M. S. DOLIBAINA, D. R. SPECHT, A. CASAGRANDE, M. M. CORNEJO, P. GIRAUDO, W. G. MIELKE, O. H. H. |
author_role |
author |
author2 |
BAUDINO, E. M. DIAS, F. M. S. DOLIBAINA, D. R. SPECHT, A. CASAGRANDE, M. M. CORNEJO, P. GIRAUDO, W. G. MIELKE, O. H. H. |
author2_role |
author author author author author author author author |
dc.contributor.none.fl_str_mv |
GERMAN SAN BLAS; ESTELA MARIS BAUDINO; FERNANDO MAIA SILVA DIAS; DIEGO RODRIGO DOLIBAINA; ALEXANDRE SPECHT, CPAC; MIRNA MARTINS CASAGRANDE; PAULA CORNEJO; WALTER GUILLOT GIRAUDO; OLAF HERMANN HENDRIK MIELKE. |
dc.contributor.author.fl_str_mv |
SAN BLAS, G. BAUDINO, E. M. DIAS, F. M. S. DOLIBAINA, D. R. SPECHT, A. CASAGRANDE, M. M. CORNEJO, P. GIRAUDO, W. G. MIELKE, O. H. H. |
dc.subject.por.fl_str_mv |
Códigos de barra de DNA Identificação de espécies Identificação morfológica Agrotis spp Identificação Espécie DNA |
topic |
Códigos de barra de DNA Identificação de espécies Identificação morfológica Agrotis spp Identificação Espécie DNA |
description |
Accurate identification of species is fundamental to every biological research. While morphological identification is a time-consuming and skilled technique, straightforward molecular techniques require the availability of a database of previously sequenced and identified specimens. For most countries of South America, species of noctuids with available sequences are scarce, mostly restricted to species of economic importance, making molecular identification untenable. Here we sequenced the mitochondrial DNA ?barcode? region of the cytochrome c oxidase subunit I gene of 34 specimens pertaining to 26 species of South American noctuids, 20 of these for the first time. For all species, genetic distances were higher for interspecific than for intraspecific relations, supporting the utility of DNA ?barcodes? to identify species. Larger intraspecific divergences occurred in species of Agrotis and Anicla, and interspecific divergences lower than 2% occurred in about one fifth of the species, all in species of Agrotis, Feltia, and Anicla. These results will allow identifying these species using DNA ?barcodes?, either for pest management or general biological studies. Furthermore, we carried out phylogenetic analyses with those sequences and 158 other sequences of 85 species of noctuids mined from GenBank. These analyses, in every case, grouped species of the same genus suggesting that the DNA ?barcodes? region alone can be useful for lower level phylogeny in this group, recovering as monophyletic groups such as Copitarsia, Agrotis and Austrandesiita. Conversely, groups such as Mythimna (Mythimna) and the subgenera of Feltia were not recovered as monophyletic, suggesting the need for further taxonomic studies in these groups. |
publishDate |
2021 |
dc.date.none.fl_str_mv |
2021 2022-05-24T05:02:12Z 2022-05-24T05:02:12Z 2022-05-23 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/publishedVersion info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
Revista Brasileira de Entomologia, v. 65, n. 4, e20210104, 2021. http://www.alice.cnptia.embrapa.br/alice/handle/doc/1143362 |
identifier_str_mv |
Revista Brasileira de Entomologia, v. 65, n. 4, e20210104, 2021. |
url |
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1143362 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa) instacron:EMBRAPA |
instname_str |
Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
instacron_str |
EMBRAPA |
institution |
EMBRAPA |
reponame_str |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
collection |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
repository.name.fl_str_mv |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
repository.mail.fl_str_mv |
cg-riaa@embrapa.br |
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1794503523317055488 |