Endo-ß-mannanase and ß-tubulin gene expression during the final phases of coffee seed maturation.

Detalhes bibliográficos
Autor(a) principal: SANTOS, F. C.
Data de Publicação: 2015
Outros Autores: CLEMENTE, A. da C. S., CAIXETA, F., ROSA, S. D. V. F. da
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1039275
Resumo: Coffee seeds begin to develop shortly after fertilization and can take 6 to 8 months to complete their formation, a period during which all the characteristics of the mature seed are determined, directly influencing physiological quality. However, little is known about the molecular mechanisms that act during coffee seed maturation. The objective of the current study was to analyze expression of the β-tubulin (TUB) and endo-β-mannanase (MAN) genes during different phases at the end of development and in different tissues of Coffea arabica seeds. The transcription levels of the TUB and MAN genes were quantified in a relative manner using qRT-PCR in whole seeds, and dissected into embryos and endosperms at different developmental stages. Greater expression of MAN was observed in whole seeds and in endosperms during the green stage, and in the embryo during the over-ripe stage. High TUB gene expression was observed in whole seeds during the green stage and, in the embryos, there were peaks in expression during the over-ripe stage. In endosperms, the peak of expression occurred in both the green stage and in the cherry stage. These results suggest participation of endo-β-mannanase during the initial seed developmental stages, and in the stages of physiological maturity in the embryo tissues. TUB gene expression varied depending on the developmental stage and section of seed analyzed, indicating the participation of β-tubulin during organogenesis and coffee seed maturation.
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spelling Endo-ß-mannanase and ß-tubulin gene expression during the final phases of coffee seed maturation.QRT-PCRCoffea ArábicaDevelopmental stagesCoffee seeds begin to develop shortly after fertilization and can take 6 to 8 months to complete their formation, a period during which all the characteristics of the mature seed are determined, directly influencing physiological quality. However, little is known about the molecular mechanisms that act during coffee seed maturation. The objective of the current study was to analyze expression of the β-tubulin (TUB) and endo-β-mannanase (MAN) genes during different phases at the end of development and in different tissues of Coffea arabica seeds. The transcription levels of the TUB and MAN genes were quantified in a relative manner using qRT-PCR in whole seeds, and dissected into embryos and endosperms at different developmental stages. Greater expression of MAN was observed in whole seeds and in endosperms during the green stage, and in the embryo during the over-ripe stage. High TUB gene expression was observed in whole seeds during the green stage and, in the embryos, there were peaks in expression during the over-ripe stage. In endosperms, the peak of expression occurred in both the green stage and in the cherry stage. These results suggest participation of endo-β-mannanase during the initial seed developmental stages, and in the stages of physiological maturity in the embryo tissues. TUB gene expression varied depending on the developmental stage and section of seed analyzed, indicating the participation of β-tubulin during organogenesis and coffee seed maturation.UDI Pesquisa & Desenvolvimento; UFLA; General Mills Brasil Alimentos Ltda.; STTELA DELLYZETE VEIGA F DA ROSA, SAPC.SANTOS, F. C.CLEMENTE, A. da C. S.CAIXETA, F.ROSA, S. D. V. F. da2016-03-02T11:11:11Z2016-03-02T11:11:11Z2016-03-0220152019-05-09T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleGenetics and Molecular Research, v. 14, n. 4, p. 11719-11728, 2015.http://www.alice.cnptia.embrapa.br/alice/handle/doc/1039275enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-16T03:07:01Zoai:www.alice.cnptia.embrapa.br:doc/1039275Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542017-08-16T03:07:01falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-16T03:07:01Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Endo-ß-mannanase and ß-tubulin gene expression during the final phases of coffee seed maturation.
title Endo-ß-mannanase and ß-tubulin gene expression during the final phases of coffee seed maturation.
spellingShingle Endo-ß-mannanase and ß-tubulin gene expression during the final phases of coffee seed maturation.
SANTOS, F. C.
QRT-PCR
Coffea Arábica
Developmental stages
title_short Endo-ß-mannanase and ß-tubulin gene expression during the final phases of coffee seed maturation.
title_full Endo-ß-mannanase and ß-tubulin gene expression during the final phases of coffee seed maturation.
title_fullStr Endo-ß-mannanase and ß-tubulin gene expression during the final phases of coffee seed maturation.
title_full_unstemmed Endo-ß-mannanase and ß-tubulin gene expression during the final phases of coffee seed maturation.
title_sort Endo-ß-mannanase and ß-tubulin gene expression during the final phases of coffee seed maturation.
author SANTOS, F. C.
author_facet SANTOS, F. C.
CLEMENTE, A. da C. S.
CAIXETA, F.
ROSA, S. D. V. F. da
author_role author
author2 CLEMENTE, A. da C. S.
CAIXETA, F.
ROSA, S. D. V. F. da
author2_role author
author
author
dc.contributor.none.fl_str_mv UDI Pesquisa & Desenvolvimento; UFLA; General Mills Brasil Alimentos Ltda.; STTELA DELLYZETE VEIGA F DA ROSA, SAPC.
dc.contributor.author.fl_str_mv SANTOS, F. C.
CLEMENTE, A. da C. S.
CAIXETA, F.
ROSA, S. D. V. F. da
dc.subject.por.fl_str_mv QRT-PCR
Coffea Arábica
Developmental stages
topic QRT-PCR
Coffea Arábica
Developmental stages
description Coffee seeds begin to develop shortly after fertilization and can take 6 to 8 months to complete their formation, a period during which all the characteristics of the mature seed are determined, directly influencing physiological quality. However, little is known about the molecular mechanisms that act during coffee seed maturation. The objective of the current study was to analyze expression of the β-tubulin (TUB) and endo-β-mannanase (MAN) genes during different phases at the end of development and in different tissues of Coffea arabica seeds. The transcription levels of the TUB and MAN genes were quantified in a relative manner using qRT-PCR in whole seeds, and dissected into embryos and endosperms at different developmental stages. Greater expression of MAN was observed in whole seeds and in endosperms during the green stage, and in the embryo during the over-ripe stage. High TUB gene expression was observed in whole seeds during the green stage and, in the embryos, there were peaks in expression during the over-ripe stage. In endosperms, the peak of expression occurred in both the green stage and in the cherry stage. These results suggest participation of endo-β-mannanase during the initial seed developmental stages, and in the stages of physiological maturity in the embryo tissues. TUB gene expression varied depending on the developmental stage and section of seed analyzed, indicating the participation of β-tubulin during organogenesis and coffee seed maturation.
publishDate 2015
dc.date.none.fl_str_mv 2015
2016-03-02T11:11:11Z
2016-03-02T11:11:11Z
2016-03-02
2019-05-09T11:11:11Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Genetics and Molecular Research, v. 14, n. 4, p. 11719-11728, 2015.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1039275
identifier_str_mv Genetics and Molecular Research, v. 14, n. 4, p. 11719-11728, 2015.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1039275
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
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