Endo-ß-mannanase and ß-tubulin gene expression during the final phases of coffee seed maturation.
Autor(a) principal: | |
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Data de Publicação: | 2015 |
Outros Autores: | , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
Texto Completo: | http://www.alice.cnptia.embrapa.br/alice/handle/doc/1039275 |
Resumo: | Coffee seeds begin to develop shortly after fertilization and can take 6 to 8 months to complete their formation, a period during which all the characteristics of the mature seed are determined, directly influencing physiological quality. However, little is known about the molecular mechanisms that act during coffee seed maturation. The objective of the current study was to analyze expression of the β-tubulin (TUB) and endo-β-mannanase (MAN) genes during different phases at the end of development and in different tissues of Coffea arabica seeds. The transcription levels of the TUB and MAN genes were quantified in a relative manner using qRT-PCR in whole seeds, and dissected into embryos and endosperms at different developmental stages. Greater expression of MAN was observed in whole seeds and in endosperms during the green stage, and in the embryo during the over-ripe stage. High TUB gene expression was observed in whole seeds during the green stage and, in the embryos, there were peaks in expression during the over-ripe stage. In endosperms, the peak of expression occurred in both the green stage and in the cherry stage. These results suggest participation of endo-β-mannanase during the initial seed developmental stages, and in the stages of physiological maturity in the embryo tissues. TUB gene expression varied depending on the developmental stage and section of seed analyzed, indicating the participation of β-tubulin during organogenesis and coffee seed maturation. |
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Endo-ß-mannanase and ß-tubulin gene expression during the final phases of coffee seed maturation.QRT-PCRCoffea ArábicaDevelopmental stagesCoffee seeds begin to develop shortly after fertilization and can take 6 to 8 months to complete their formation, a period during which all the characteristics of the mature seed are determined, directly influencing physiological quality. However, little is known about the molecular mechanisms that act during coffee seed maturation. The objective of the current study was to analyze expression of the β-tubulin (TUB) and endo-β-mannanase (MAN) genes during different phases at the end of development and in different tissues of Coffea arabica seeds. The transcription levels of the TUB and MAN genes were quantified in a relative manner using qRT-PCR in whole seeds, and dissected into embryos and endosperms at different developmental stages. Greater expression of MAN was observed in whole seeds and in endosperms during the green stage, and in the embryo during the over-ripe stage. High TUB gene expression was observed in whole seeds during the green stage and, in the embryos, there were peaks in expression during the over-ripe stage. In endosperms, the peak of expression occurred in both the green stage and in the cherry stage. These results suggest participation of endo-β-mannanase during the initial seed developmental stages, and in the stages of physiological maturity in the embryo tissues. TUB gene expression varied depending on the developmental stage and section of seed analyzed, indicating the participation of β-tubulin during organogenesis and coffee seed maturation.UDI Pesquisa & Desenvolvimento; UFLA; General Mills Brasil Alimentos Ltda.; STTELA DELLYZETE VEIGA F DA ROSA, SAPC.SANTOS, F. C.CLEMENTE, A. da C. S.CAIXETA, F.ROSA, S. D. V. F. da2016-03-02T11:11:11Z2016-03-02T11:11:11Z2016-03-0220152019-05-09T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleGenetics and Molecular Research, v. 14, n. 4, p. 11719-11728, 2015.http://www.alice.cnptia.embrapa.br/alice/handle/doc/1039275enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-16T03:07:01Zoai:www.alice.cnptia.embrapa.br:doc/1039275Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542017-08-16T03:07:01falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-16T03:07:01Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false |
dc.title.none.fl_str_mv |
Endo-ß-mannanase and ß-tubulin gene expression during the final phases of coffee seed maturation. |
title |
Endo-ß-mannanase and ß-tubulin gene expression during the final phases of coffee seed maturation. |
spellingShingle |
Endo-ß-mannanase and ß-tubulin gene expression during the final phases of coffee seed maturation. SANTOS, F. C. QRT-PCR Coffea Arábica Developmental stages |
title_short |
Endo-ß-mannanase and ß-tubulin gene expression during the final phases of coffee seed maturation. |
title_full |
Endo-ß-mannanase and ß-tubulin gene expression during the final phases of coffee seed maturation. |
title_fullStr |
Endo-ß-mannanase and ß-tubulin gene expression during the final phases of coffee seed maturation. |
title_full_unstemmed |
Endo-ß-mannanase and ß-tubulin gene expression during the final phases of coffee seed maturation. |
title_sort |
Endo-ß-mannanase and ß-tubulin gene expression during the final phases of coffee seed maturation. |
author |
SANTOS, F. C. |
author_facet |
SANTOS, F. C. CLEMENTE, A. da C. S. CAIXETA, F. ROSA, S. D. V. F. da |
author_role |
author |
author2 |
CLEMENTE, A. da C. S. CAIXETA, F. ROSA, S. D. V. F. da |
author2_role |
author author author |
dc.contributor.none.fl_str_mv |
UDI Pesquisa & Desenvolvimento; UFLA; General Mills Brasil Alimentos Ltda.; STTELA DELLYZETE VEIGA F DA ROSA, SAPC. |
dc.contributor.author.fl_str_mv |
SANTOS, F. C. CLEMENTE, A. da C. S. CAIXETA, F. ROSA, S. D. V. F. da |
dc.subject.por.fl_str_mv |
QRT-PCR Coffea Arábica Developmental stages |
topic |
QRT-PCR Coffea Arábica Developmental stages |
description |
Coffee seeds begin to develop shortly after fertilization and can take 6 to 8 months to complete their formation, a period during which all the characteristics of the mature seed are determined, directly influencing physiological quality. However, little is known about the molecular mechanisms that act during coffee seed maturation. The objective of the current study was to analyze expression of the β-tubulin (TUB) and endo-β-mannanase (MAN) genes during different phases at the end of development and in different tissues of Coffea arabica seeds. The transcription levels of the TUB and MAN genes were quantified in a relative manner using qRT-PCR in whole seeds, and dissected into embryos and endosperms at different developmental stages. Greater expression of MAN was observed in whole seeds and in endosperms during the green stage, and in the embryo during the over-ripe stage. High TUB gene expression was observed in whole seeds during the green stage and, in the embryos, there were peaks in expression during the over-ripe stage. In endosperms, the peak of expression occurred in both the green stage and in the cherry stage. These results suggest participation of endo-β-mannanase during the initial seed developmental stages, and in the stages of physiological maturity in the embryo tissues. TUB gene expression varied depending on the developmental stage and section of seed analyzed, indicating the participation of β-tubulin during organogenesis and coffee seed maturation. |
publishDate |
2015 |
dc.date.none.fl_str_mv |
2015 2016-03-02T11:11:11Z 2016-03-02T11:11:11Z 2016-03-02 2019-05-09T11:11:11Z |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/publishedVersion info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
Genetics and Molecular Research, v. 14, n. 4, p. 11719-11728, 2015. http://www.alice.cnptia.embrapa.br/alice/handle/doc/1039275 |
identifier_str_mv |
Genetics and Molecular Research, v. 14, n. 4, p. 11719-11728, 2015. |
url |
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1039275 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa) instacron:EMBRAPA |
instname_str |
Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
instacron_str |
EMBRAPA |
institution |
EMBRAPA |
reponame_str |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
collection |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
repository.name.fl_str_mv |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
repository.mail.fl_str_mv |
cg-riaa@embrapa.br |
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1794503419142078464 |