Receptor-Like Kinase (RLK) as a candidate gene conferring resistance to Hemileia vastatrix in coffee.

Detalhes bibliográficos
Autor(a) principal: ALMEIDA, D. P. de
Data de Publicação: 2021
Outros Autores: CASTRO, I. S. L., MENDES, T. A. de O., ALVES, D. R., BARKA, G. D., BARREIROS, P. R. R. M., ZAMBOLIM, L., SAKIYAMA, N. S., CAIXETA, E. T.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1139319
https://doi.org/10.1590/1678-992X-2020-0023
Resumo: The biotrophic fungus Hemileia vastatrix causes coffee leaf rust (CLR), one of the most devastating diseases in Coffea arabica . Coffee, like other plants, has developed effective mechanisms to recognize and respond to infections caused by pathogens. Plant resistance gene analogs (RGAs) have been identified in certain plants as candidates for resistance ( R ) genes or membrane receptors that activate the R genes. The RGAs identified in different plants possess conserved domains that play specific roles in the fight against pathogens. Despite the importance of RGAs, in coffee plants these genes and other molecular mechanisms of disease resistance are still unknown. This study aimed to sequence and characterize candidate genes from coffee plants with the potential for involvement in resistance to H. vastatrix . Sequencing was performed based on a library of bacterial artificial chromosomes (BAC) of the coffee clone ?Híbrido de Timor? (HdT) CIFC 832/2 and screened using a functional marker. Two RGAs, HdT_LRR_RLK1 and HdT_LRR_RLK2, containing the motif of leucine-rich repeat-like kinase (LRR-RLK) were identified. Based on the presence or absence of the HdT_LRR_RLK2 RGA in a number of differential coffee clones containing different combinations of the rust resistance gene, these RGAs did not correspond to any resistance gene already characterized (SH1-9). These genes were also analyzed using qPCR and demonstrated a major expression peak at 24 h after inoculation in both the compatible and incompatible interactions between coffee and H. vastatrix . These results are valuable information for breeding programs aimed at developing CLR-resistant cultivars, in addition to enabling a better understanding of the interactions between coffee and H. vastatrix.
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spelling Receptor-Like Kinase (RLK) as a candidate gene conferring resistance to Hemileia vastatrix in coffee.Receptor-Like KinaseHemileia VastatrixHemileiaLeaf rustPlant diseases and disordersCoffea arabica var. arabicaClonesPlant breedingThe biotrophic fungus Hemileia vastatrix causes coffee leaf rust (CLR), one of the most devastating diseases in Coffea arabica . Coffee, like other plants, has developed effective mechanisms to recognize and respond to infections caused by pathogens. Plant resistance gene analogs (RGAs) have been identified in certain plants as candidates for resistance ( R ) genes or membrane receptors that activate the R genes. The RGAs identified in different plants possess conserved domains that play specific roles in the fight against pathogens. Despite the importance of RGAs, in coffee plants these genes and other molecular mechanisms of disease resistance are still unknown. This study aimed to sequence and characterize candidate genes from coffee plants with the potential for involvement in resistance to H. vastatrix . Sequencing was performed based on a library of bacterial artificial chromosomes (BAC) of the coffee clone ?Híbrido de Timor? (HdT) CIFC 832/2 and screened using a functional marker. Two RGAs, HdT_LRR_RLK1 and HdT_LRR_RLK2, containing the motif of leucine-rich repeat-like kinase (LRR-RLK) were identified. Based on the presence or absence of the HdT_LRR_RLK2 RGA in a number of differential coffee clones containing different combinations of the rust resistance gene, these RGAs did not correspond to any resistance gene already characterized (SH1-9). These genes were also analyzed using qPCR and demonstrated a major expression peak at 24 h after inoculation in both the compatible and incompatible interactions between coffee and H. vastatrix . These results are valuable information for breeding programs aimed at developing CLR-resistant cultivars, in addition to enabling a better understanding of the interactions between coffee and H. vastatrix.DÊNIA PIRES DE ALMEIDA, UFV; ISABEL SAMILA LIMA CASTRO, UFV; TIAGO ANTÔNIO DE OLIVEIRA MENDES, UFV; DANÚBIA RODRIGUES ALVES, UFV; GELETA DUGASSA BARKA, UFV; PEDRO RICARDO ROSSI MARQUES BARREIROS, UFV; LAÉRCIO ZAMBOLIM, UFV; NEY SUSSUMU SAKIYAMA, UFV; EVELINE TEIXEIRA CAIXETA MOURA, CNPCa.ALMEIDA, D. P. deCASTRO, I. S. L.MENDES, T. A. de O.ALVES, D. R.BARKA, G. D.BARREIROS, P. R. R. M.ZAMBOLIM, L.SAKIYAMA, N. S.CAIXETA, E. T.2022-01-26T14:00:41Z2022-01-26T14:00:41Z2022-01-262021info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleScientia Agricola, v.78, n.6, e20200023, 2021.http://www.alice.cnptia.embrapa.br/alice/handle/doc/1139319https://doi.org/10.1590/1678-992X-2020-0023enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2022-01-26T14:00:49Zoai:www.alice.cnptia.embrapa.br:doc/1139319Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542022-01-26T14:00:49falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542022-01-26T14:00:49Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Receptor-Like Kinase (RLK) as a candidate gene conferring resistance to Hemileia vastatrix in coffee.
title Receptor-Like Kinase (RLK) as a candidate gene conferring resistance to Hemileia vastatrix in coffee.
spellingShingle Receptor-Like Kinase (RLK) as a candidate gene conferring resistance to Hemileia vastatrix in coffee.
ALMEIDA, D. P. de
Receptor-Like Kinase
Hemileia Vastatrix
Hemileia
Leaf rust
Plant diseases and disorders
Coffea arabica var. arabica
Clones
Plant breeding
title_short Receptor-Like Kinase (RLK) as a candidate gene conferring resistance to Hemileia vastatrix in coffee.
title_full Receptor-Like Kinase (RLK) as a candidate gene conferring resistance to Hemileia vastatrix in coffee.
title_fullStr Receptor-Like Kinase (RLK) as a candidate gene conferring resistance to Hemileia vastatrix in coffee.
title_full_unstemmed Receptor-Like Kinase (RLK) as a candidate gene conferring resistance to Hemileia vastatrix in coffee.
title_sort Receptor-Like Kinase (RLK) as a candidate gene conferring resistance to Hemileia vastatrix in coffee.
author ALMEIDA, D. P. de
author_facet ALMEIDA, D. P. de
CASTRO, I. S. L.
MENDES, T. A. de O.
ALVES, D. R.
BARKA, G. D.
BARREIROS, P. R. R. M.
ZAMBOLIM, L.
SAKIYAMA, N. S.
CAIXETA, E. T.
author_role author
author2 CASTRO, I. S. L.
MENDES, T. A. de O.
ALVES, D. R.
BARKA, G. D.
BARREIROS, P. R. R. M.
ZAMBOLIM, L.
SAKIYAMA, N. S.
CAIXETA, E. T.
author2_role author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv DÊNIA PIRES DE ALMEIDA, UFV; ISABEL SAMILA LIMA CASTRO, UFV; TIAGO ANTÔNIO DE OLIVEIRA MENDES, UFV; DANÚBIA RODRIGUES ALVES, UFV; GELETA DUGASSA BARKA, UFV; PEDRO RICARDO ROSSI MARQUES BARREIROS, UFV; LAÉRCIO ZAMBOLIM, UFV; NEY SUSSUMU SAKIYAMA, UFV; EVELINE TEIXEIRA CAIXETA MOURA, CNPCa.
dc.contributor.author.fl_str_mv ALMEIDA, D. P. de
CASTRO, I. S. L.
MENDES, T. A. de O.
ALVES, D. R.
BARKA, G. D.
BARREIROS, P. R. R. M.
ZAMBOLIM, L.
SAKIYAMA, N. S.
CAIXETA, E. T.
dc.subject.por.fl_str_mv Receptor-Like Kinase
Hemileia Vastatrix
Hemileia
Leaf rust
Plant diseases and disorders
Coffea arabica var. arabica
Clones
Plant breeding
topic Receptor-Like Kinase
Hemileia Vastatrix
Hemileia
Leaf rust
Plant diseases and disorders
Coffea arabica var. arabica
Clones
Plant breeding
description The biotrophic fungus Hemileia vastatrix causes coffee leaf rust (CLR), one of the most devastating diseases in Coffea arabica . Coffee, like other plants, has developed effective mechanisms to recognize and respond to infections caused by pathogens. Plant resistance gene analogs (RGAs) have been identified in certain plants as candidates for resistance ( R ) genes or membrane receptors that activate the R genes. The RGAs identified in different plants possess conserved domains that play specific roles in the fight against pathogens. Despite the importance of RGAs, in coffee plants these genes and other molecular mechanisms of disease resistance are still unknown. This study aimed to sequence and characterize candidate genes from coffee plants with the potential for involvement in resistance to H. vastatrix . Sequencing was performed based on a library of bacterial artificial chromosomes (BAC) of the coffee clone ?Híbrido de Timor? (HdT) CIFC 832/2 and screened using a functional marker. Two RGAs, HdT_LRR_RLK1 and HdT_LRR_RLK2, containing the motif of leucine-rich repeat-like kinase (LRR-RLK) were identified. Based on the presence or absence of the HdT_LRR_RLK2 RGA in a number of differential coffee clones containing different combinations of the rust resistance gene, these RGAs did not correspond to any resistance gene already characterized (SH1-9). These genes were also analyzed using qPCR and demonstrated a major expression peak at 24 h after inoculation in both the compatible and incompatible interactions between coffee and H. vastatrix . These results are valuable information for breeding programs aimed at developing CLR-resistant cultivars, in addition to enabling a better understanding of the interactions between coffee and H. vastatrix.
publishDate 2021
dc.date.none.fl_str_mv 2021
2022-01-26T14:00:41Z
2022-01-26T14:00:41Z
2022-01-26
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Scientia Agricola, v.78, n.6, e20200023, 2021.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1139319
https://doi.org/10.1590/1678-992X-2020-0023
identifier_str_mv Scientia Agricola, v.78, n.6, e20200023, 2021.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1139319
https://doi.org/10.1590/1678-992X-2020-0023
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
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