Identification of drought-responsive genes in roots of upland rice (Oryza sativa L).

Detalhes bibliográficos
Autor(a) principal: RABELLO, A. R.
Data de Publicação: 2008
Outros Autores: GUIMARÃES, C. M., RANGEL, P. H. N., SILVA, F. R. da, SEIXAS, D., SOUZA, E. de, BRASILEIRO, A. C. M., SPEHAR, C. R., FERREIRA, M. E., MEHTA, A.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/217500
https://doi.org/10.1186/1471-2164-9-485
Resumo: Rice (Oryza sativa L.) germplasm represents an extraordinary source of genes that control traits of agronomic importance such as drought tolerance. This diversity is the basis for the development of new cultivars better adapted to water restriction conditions, in particular for upland rice, which is grown under rainfall. The analyses of subtractive cDNA libraries and differential protein expression of drought tolerant and susceptible genotypes can contribute to the understanding of the genetic control of water use efficiency in rice. Two subtractive libraries were constructed using cDNA of drought susceptible and tolerant genotypes submitted to stress against cDNA of well-watered plants. In silico analysis revealed 463 reads, which were grouped into 282 clusters. Several genes expressed exclusively in the tolerant or susceptible genotypes were identified. Additionally, proteome analysis of roots from stressed plants was performed and 22 proteins putatively associated to drought tolerance were identified by mass spectrometry.
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spelling Identification of drought-responsive genes in roots of upland rice (Oryza sativa L).ArrozGermoplasmaOryza SativaResistência a SecaSistema RadicularriceRice (Oryza sativa L.) germplasm represents an extraordinary source of genes that control traits of agronomic importance such as drought tolerance. This diversity is the basis for the development of new cultivars better adapted to water restriction conditions, in particular for upland rice, which is grown under rainfall. The analyses of subtractive cDNA libraries and differential protein expression of drought tolerant and susceptible genotypes can contribute to the understanding of the genetic control of water use efficiency in rice. Two subtractive libraries were constructed using cDNA of drought susceptible and tolerant genotypes submitted to stress against cDNA of well-watered plants. In silico analysis revealed 463 reads, which were grouped into 282 clusters. Several genes expressed exclusively in the tolerant or susceptible genotypes were identified. Additionally, proteome analysis of roots from stressed plants was performed and 22 proteins putatively associated to drought tolerance were identified by mass spectrometry.ALINE R. RABELLO, UNB; CLEBER MORAIS GUIMARAES, CNPAF; PAULO HIDEO NAKANO RANGEL, CNPAF; F. R. DA SILVA; DANIELA SEIXAS, UFPR; EMANUEL DE SOUZA, UFPR; ANA CRISTINA MIRANDA BRASILEIRO, CENARGEN; CARLOS R. SPEHAR, UNB; MARCIO ELIAS FERREIRA, CENARGEN; ANGELA MEHTA, Cenargen.RABELLO, A. R.GUIMARÃES, C. M.RANGEL, P. H. N.SILVA, F. R. daSEIXAS, D.SOUZA, E. deBRASILEIRO, A. C. M.SPEHAR, C. R.FERREIRA, M. E.MEHTA, A.2022-06-03T05:00:25Z2022-06-03T05:00:25Z2008-11-242008info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleBMC Genomics, v. 9, n. 485, out. 2008.http://www.alice.cnptia.embrapa.br/alice/handle/doc/217500https://doi.org/10.1186/1471-2164-9-485enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2022-06-03T05:00:36Zoai:www.alice.cnptia.embrapa.br:doc/217500Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542022-06-03T05:00:36falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542022-06-03T05:00:36Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Identification of drought-responsive genes in roots of upland rice (Oryza sativa L).
title Identification of drought-responsive genes in roots of upland rice (Oryza sativa L).
spellingShingle Identification of drought-responsive genes in roots of upland rice (Oryza sativa L).
RABELLO, A. R.
Arroz
Germoplasma
Oryza Sativa
Resistência a Seca
Sistema Radicular
rice
title_short Identification of drought-responsive genes in roots of upland rice (Oryza sativa L).
title_full Identification of drought-responsive genes in roots of upland rice (Oryza sativa L).
title_fullStr Identification of drought-responsive genes in roots of upland rice (Oryza sativa L).
title_full_unstemmed Identification of drought-responsive genes in roots of upland rice (Oryza sativa L).
title_sort Identification of drought-responsive genes in roots of upland rice (Oryza sativa L).
author RABELLO, A. R.
author_facet RABELLO, A. R.
GUIMARÃES, C. M.
RANGEL, P. H. N.
SILVA, F. R. da
SEIXAS, D.
SOUZA, E. de
BRASILEIRO, A. C. M.
SPEHAR, C. R.
FERREIRA, M. E.
MEHTA, A.
author_role author
author2 GUIMARÃES, C. M.
RANGEL, P. H. N.
SILVA, F. R. da
SEIXAS, D.
SOUZA, E. de
BRASILEIRO, A. C. M.
SPEHAR, C. R.
FERREIRA, M. E.
MEHTA, A.
author2_role author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv ALINE R. RABELLO, UNB; CLEBER MORAIS GUIMARAES, CNPAF; PAULO HIDEO NAKANO RANGEL, CNPAF; F. R. DA SILVA; DANIELA SEIXAS, UFPR; EMANUEL DE SOUZA, UFPR; ANA CRISTINA MIRANDA BRASILEIRO, CENARGEN; CARLOS R. SPEHAR, UNB; MARCIO ELIAS FERREIRA, CENARGEN; ANGELA MEHTA, Cenargen.
dc.contributor.author.fl_str_mv RABELLO, A. R.
GUIMARÃES, C. M.
RANGEL, P. H. N.
SILVA, F. R. da
SEIXAS, D.
SOUZA, E. de
BRASILEIRO, A. C. M.
SPEHAR, C. R.
FERREIRA, M. E.
MEHTA, A.
dc.subject.por.fl_str_mv Arroz
Germoplasma
Oryza Sativa
Resistência a Seca
Sistema Radicular
rice
topic Arroz
Germoplasma
Oryza Sativa
Resistência a Seca
Sistema Radicular
rice
description Rice (Oryza sativa L.) germplasm represents an extraordinary source of genes that control traits of agronomic importance such as drought tolerance. This diversity is the basis for the development of new cultivars better adapted to water restriction conditions, in particular for upland rice, which is grown under rainfall. The analyses of subtractive cDNA libraries and differential protein expression of drought tolerant and susceptible genotypes can contribute to the understanding of the genetic control of water use efficiency in rice. Two subtractive libraries were constructed using cDNA of drought susceptible and tolerant genotypes submitted to stress against cDNA of well-watered plants. In silico analysis revealed 463 reads, which were grouped into 282 clusters. Several genes expressed exclusively in the tolerant or susceptible genotypes were identified. Additionally, proteome analysis of roots from stressed plants was performed and 22 proteins putatively associated to drought tolerance were identified by mass spectrometry.
publishDate 2008
dc.date.none.fl_str_mv 2008-11-24
2008
2022-06-03T05:00:25Z
2022-06-03T05:00:25Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv BMC Genomics, v. 9, n. 485, out. 2008.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/217500
https://doi.org/10.1186/1471-2164-9-485
identifier_str_mv BMC Genomics, v. 9, n. 485, out. 2008.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/217500
https://doi.org/10.1186/1471-2164-9-485
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
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