Carotenoid biosynthesis strutural genes in carrot (Daucus carota): isolation, sequence-characterization, single nucleotide polymorphism (SNP) markers and genome mapping.

Detalhes bibliográficos
Autor(a) principal: JUST, B. J.
Data de Publicação: 2007
Outros Autores: SANTOS, C. A. F., FONSECA, M. E. N., BOITEUX, L. S., OLOIZIA, B. B., SIMON, P. W.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/780437
Resumo: In this study, we utilized published carrot sequences as well as heterologous PCR approaches with primers derived from sequence information of other plant species to isolate 24 putative genes coding for carotenoid bio-synthesis enzymes in carrot. Twenty-two of these genes were placed on the carrot genetic linkage map developed from a cross between orange-rooted and white- rooted carrot. The carotenoid genes were distributed in eight of the nine linkage groups in the carrot genome recommending their use for merging maps. Two genes co-localized with a genomic region spanning one of the most significant quantitative trait loci (QTL) for carotenoid accumulation.
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spelling Carotenoid biosynthesis strutural genes in carrot (Daucus carota): isolation, sequence-characterization, single nucleotide polymorphism (SNP) markers and genome mapping.Mapa genômicoSequência genéticacDNACarotenóideCenouraDaucus CarotaMarcador MolecularPolimorfismoIn this study, we utilized published carrot sequences as well as heterologous PCR approaches with primers derived from sequence information of other plant species to isolate 24 putative genes coding for carotenoid bio-synthesis enzymes in carrot. Twenty-two of these genes were placed on the carrot genetic linkage map developed from a cross between orange-rooted and white- rooted carrot. The carotenoid genes were distributed in eight of the nine linkage groups in the carrot genome recommending their use for merging maps. Two genes co-localized with a genomic region spanning one of the most significant quantitative trait loci (QTL) for carotenoid accumulation.B. J. JUST; C. A. F. SANTOS; MARIA ESTHER DE N FONSECA BOITEUX, CNPH; LEONARDO SILVA BOITEUX, CNPH; B. B. OLOIZIA, University of Wisconsin; P. W. SIMON, University of Wisconsin.JUST, B. J.SANTOS, C. A. F.FONSECA, M. E. N.BOITEUX, L. S.OLOIZIA, B. B.SIMON, P. W.2024-01-24T19:20:25Z2024-01-24T19:20:25Z2007-12-132007info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleTheoretical and Applied Genetics, Berlin, v. 114, p. 693-704, 2007.1432-2242http://www.alice.cnptia.embrapa.br/alice/handle/doc/780437enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2024-01-24T19:20:25Zoai:www.alice.cnptia.embrapa.br:doc/780437Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542024-01-24T19:20:25falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542024-01-24T19:20:25Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Carotenoid biosynthesis strutural genes in carrot (Daucus carota): isolation, sequence-characterization, single nucleotide polymorphism (SNP) markers and genome mapping.
title Carotenoid biosynthesis strutural genes in carrot (Daucus carota): isolation, sequence-characterization, single nucleotide polymorphism (SNP) markers and genome mapping.
spellingShingle Carotenoid biosynthesis strutural genes in carrot (Daucus carota): isolation, sequence-characterization, single nucleotide polymorphism (SNP) markers and genome mapping.
JUST, B. J.
Mapa genômico
Sequência genética
cDNA
Carotenóide
Cenoura
Daucus Carota
Marcador Molecular
Polimorfismo
title_short Carotenoid biosynthesis strutural genes in carrot (Daucus carota): isolation, sequence-characterization, single nucleotide polymorphism (SNP) markers and genome mapping.
title_full Carotenoid biosynthesis strutural genes in carrot (Daucus carota): isolation, sequence-characterization, single nucleotide polymorphism (SNP) markers and genome mapping.
title_fullStr Carotenoid biosynthesis strutural genes in carrot (Daucus carota): isolation, sequence-characterization, single nucleotide polymorphism (SNP) markers and genome mapping.
title_full_unstemmed Carotenoid biosynthesis strutural genes in carrot (Daucus carota): isolation, sequence-characterization, single nucleotide polymorphism (SNP) markers and genome mapping.
title_sort Carotenoid biosynthesis strutural genes in carrot (Daucus carota): isolation, sequence-characterization, single nucleotide polymorphism (SNP) markers and genome mapping.
author JUST, B. J.
author_facet JUST, B. J.
SANTOS, C. A. F.
FONSECA, M. E. N.
BOITEUX, L. S.
OLOIZIA, B. B.
SIMON, P. W.
author_role author
author2 SANTOS, C. A. F.
FONSECA, M. E. N.
BOITEUX, L. S.
OLOIZIA, B. B.
SIMON, P. W.
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv B. J. JUST; C. A. F. SANTOS; MARIA ESTHER DE N FONSECA BOITEUX, CNPH; LEONARDO SILVA BOITEUX, CNPH; B. B. OLOIZIA, University of Wisconsin; P. W. SIMON, University of Wisconsin.
dc.contributor.author.fl_str_mv JUST, B. J.
SANTOS, C. A. F.
FONSECA, M. E. N.
BOITEUX, L. S.
OLOIZIA, B. B.
SIMON, P. W.
dc.subject.por.fl_str_mv Mapa genômico
Sequência genética
cDNA
Carotenóide
Cenoura
Daucus Carota
Marcador Molecular
Polimorfismo
topic Mapa genômico
Sequência genética
cDNA
Carotenóide
Cenoura
Daucus Carota
Marcador Molecular
Polimorfismo
description In this study, we utilized published carrot sequences as well as heterologous PCR approaches with primers derived from sequence information of other plant species to isolate 24 putative genes coding for carotenoid bio-synthesis enzymes in carrot. Twenty-two of these genes were placed on the carrot genetic linkage map developed from a cross between orange-rooted and white- rooted carrot. The carotenoid genes were distributed in eight of the nine linkage groups in the carrot genome recommending their use for merging maps. Two genes co-localized with a genomic region spanning one of the most significant quantitative trait loci (QTL) for carotenoid accumulation.
publishDate 2007
dc.date.none.fl_str_mv 2007-12-13
2007
2024-01-24T19:20:25Z
2024-01-24T19:20:25Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Theoretical and Applied Genetics, Berlin, v. 114, p. 693-704, 2007.
1432-2242
http://www.alice.cnptia.embrapa.br/alice/handle/doc/780437
identifier_str_mv Theoretical and Applied Genetics, Berlin, v. 114, p. 693-704, 2007.
1432-2242
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/780437
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
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