RAPD and ISSR markers in the evaluation of genetic divergence among accessions of elephant grass.
Autor(a) principal: | |
---|---|
Data de Publicação: | 2011 |
Outros Autores: | , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
Texto Completo: | http://www.alice.cnptia.embrapa.br/alice/handle/doc/913619 https://doi.org/10.4238/vol10-3gmr1107 |
Resumo: | Considering the expected genetic variability of elephant grass (Pennisetum purpureum), due to its cultivation in different continents, we characterized and estimated the genetic divergences between 46 accessions of elephant grass with different edaphoclimatic adaptations, using RAPD and ISSR markers. We evaluated, comparatively, the consistency of the information achieved with these markers. Twenty-six RAPD and 25 ISSR primers were employed. The RAPD markers produced 185 bands, 72% of which were polymorphic, with a mean of 5.11 polymorphic bands per primer. The 25 ISSR starters produced 216 bands; 76% were polymorphic, with a mean of 6.56 polymorphic bands per primer. The correlation between the genetic distances achieved by the RAPD and ISSR markers was 0.76, which is highly significant by the Mantel test. Based on UPGMA grouping, considering the point of sudden change, five and six groups were formed for the data from the RAPD and ISSR markers, respectively. These markers provided partially concordant groups, indicating that these techniques can provide consistent information and consequently could be used in studies of genetic diversity among accessions. |
id |
EMBR_5e3a8204c4dc214a9e9923c1f7848090 |
---|---|
oai_identifier_str |
oai:www.alice.cnptia.embrapa.br:doc/913619 |
network_acronym_str |
EMBR |
network_name_str |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
repository_id_str |
2154 |
spelling |
RAPD and ISSR markers in the evaluation of genetic divergence among accessions of elephant grass.Pennisetum purpureum SchumRAPD and ISSR markersGenetic variabilityConsidering the expected genetic variability of elephant grass (Pennisetum purpureum), due to its cultivation in different continents, we characterized and estimated the genetic divergences between 46 accessions of elephant grass with different edaphoclimatic adaptations, using RAPD and ISSR markers. We evaluated, comparatively, the consistency of the information achieved with these markers. Twenty-six RAPD and 25 ISSR primers were employed. The RAPD markers produced 185 bands, 72% of which were polymorphic, with a mean of 5.11 polymorphic bands per primer. The 25 ISSR starters produced 216 bands; 76% were polymorphic, with a mean of 6.56 polymorphic bands per primer. The correlation between the genetic distances achieved by the RAPD and ISSR markers was 0.76, which is highly significant by the Mantel test. Based on UPGMA grouping, considering the point of sudden change, five and six groups were formed for the data from the RAPD and ISSR markers, respectively. These markers provided partially concordant groups, indicating that these techniques can provide consistent information and consequently could be used in studies of genetic diversity among accessions.R. S. N. DE LIMA, Universidade Estadual do Norte Fluminense Darcy Ribeiro; R. F. DAHER, Universidade Estadual do Norte Fluminense Darcy Ribeiro; L. S. A. GONÇALVES, Universidade Estadual do Norte Fluminense Darcy Ribeiro; D. A. ROSSI, Universidade Estadual do Norte Fluminense Darcy Ribeiro; A. T. DO AMARAL JÚNIOR, Universidade Estadual do Norte Fluminense Darcy Ribeiro; M. G. PEREIRA, Universidade Estadual do Norte Fluminense Darcy Ribeiro; FRANCISCO JOSE DA SILVA LEDO, CNPGL.LIMA, R. S. N. deDAHER, R. F.GONÇALVES, L. S. A.ROSSI, D. A.AMARAL JÚNIOR, A. T. doPEREIRA, M. G.LEDO, F. J. da S.2024-02-06T10:41:10Z2024-02-06T10:41:10Z2012-01-262011info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleGenetics and Molecular Research, v. 10, n. 3, p. 1214-1223, 2011.http://www.alice.cnptia.embrapa.br/alice/handle/doc/913619https://doi.org/10.4238/vol10-3gmr1107enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2024-02-06T10:41:10Zoai:www.alice.cnptia.embrapa.br:doc/913619Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542024-02-06T10:41:10falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542024-02-06T10:41:10Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false |
dc.title.none.fl_str_mv |
RAPD and ISSR markers in the evaluation of genetic divergence among accessions of elephant grass. |
title |
RAPD and ISSR markers in the evaluation of genetic divergence among accessions of elephant grass. |
spellingShingle |
RAPD and ISSR markers in the evaluation of genetic divergence among accessions of elephant grass. LIMA, R. S. N. de Pennisetum purpureum Schum RAPD and ISSR markers Genetic variability |
title_short |
RAPD and ISSR markers in the evaluation of genetic divergence among accessions of elephant grass. |
title_full |
RAPD and ISSR markers in the evaluation of genetic divergence among accessions of elephant grass. |
title_fullStr |
RAPD and ISSR markers in the evaluation of genetic divergence among accessions of elephant grass. |
title_full_unstemmed |
RAPD and ISSR markers in the evaluation of genetic divergence among accessions of elephant grass. |
title_sort |
RAPD and ISSR markers in the evaluation of genetic divergence among accessions of elephant grass. |
author |
LIMA, R. S. N. de |
author_facet |
LIMA, R. S. N. de DAHER, R. F. GONÇALVES, L. S. A. ROSSI, D. A. AMARAL JÚNIOR, A. T. do PEREIRA, M. G. LEDO, F. J. da S. |
author_role |
author |
author2 |
DAHER, R. F. GONÇALVES, L. S. A. ROSSI, D. A. AMARAL JÚNIOR, A. T. do PEREIRA, M. G. LEDO, F. J. da S. |
author2_role |
author author author author author author |
dc.contributor.none.fl_str_mv |
R. S. N. DE LIMA, Universidade Estadual do Norte Fluminense Darcy Ribeiro; R. F. DAHER, Universidade Estadual do Norte Fluminense Darcy Ribeiro; L. S. A. GONÇALVES, Universidade Estadual do Norte Fluminense Darcy Ribeiro; D. A. ROSSI, Universidade Estadual do Norte Fluminense Darcy Ribeiro; A. T. DO AMARAL JÚNIOR, Universidade Estadual do Norte Fluminense Darcy Ribeiro; M. G. PEREIRA, Universidade Estadual do Norte Fluminense Darcy Ribeiro; FRANCISCO JOSE DA SILVA LEDO, CNPGL. |
dc.contributor.author.fl_str_mv |
LIMA, R. S. N. de DAHER, R. F. GONÇALVES, L. S. A. ROSSI, D. A. AMARAL JÚNIOR, A. T. do PEREIRA, M. G. LEDO, F. J. da S. |
dc.subject.por.fl_str_mv |
Pennisetum purpureum Schum RAPD and ISSR markers Genetic variability |
topic |
Pennisetum purpureum Schum RAPD and ISSR markers Genetic variability |
description |
Considering the expected genetic variability of elephant grass (Pennisetum purpureum), due to its cultivation in different continents, we characterized and estimated the genetic divergences between 46 accessions of elephant grass with different edaphoclimatic adaptations, using RAPD and ISSR markers. We evaluated, comparatively, the consistency of the information achieved with these markers. Twenty-six RAPD and 25 ISSR primers were employed. The RAPD markers produced 185 bands, 72% of which were polymorphic, with a mean of 5.11 polymorphic bands per primer. The 25 ISSR starters produced 216 bands; 76% were polymorphic, with a mean of 6.56 polymorphic bands per primer. The correlation between the genetic distances achieved by the RAPD and ISSR markers was 0.76, which is highly significant by the Mantel test. Based on UPGMA grouping, considering the point of sudden change, five and six groups were formed for the data from the RAPD and ISSR markers, respectively. These markers provided partially concordant groups, indicating that these techniques can provide consistent information and consequently could be used in studies of genetic diversity among accessions. |
publishDate |
2011 |
dc.date.none.fl_str_mv |
2011 2012-01-26 2024-02-06T10:41:10Z 2024-02-06T10:41:10Z |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/publishedVersion info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
Genetics and Molecular Research, v. 10, n. 3, p. 1214-1223, 2011. http://www.alice.cnptia.embrapa.br/alice/handle/doc/913619 https://doi.org/10.4238/vol10-3gmr1107 |
identifier_str_mv |
Genetics and Molecular Research, v. 10, n. 3, p. 1214-1223, 2011. |
url |
http://www.alice.cnptia.embrapa.br/alice/handle/doc/913619 https://doi.org/10.4238/vol10-3gmr1107 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa) instacron:EMBRAPA |
instname_str |
Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
instacron_str |
EMBRAPA |
institution |
EMBRAPA |
reponame_str |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
collection |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
repository.name.fl_str_mv |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
repository.mail.fl_str_mv |
cg-riaa@embrapa.br |
_version_ |
1794503557472321536 |