High-throughput sequencing of black pepper root transcriptome.
Autor(a) principal: | |
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Data de Publicação: | 2012 |
Outros Autores: | , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
Texto Completo: | http://www.alice.cnptia.embrapa.br/alice/handle/doc/935241 |
Resumo: | Black pepper (Piper nigrum L.) is one of the most popular spices in the world. It is used in cooking and the preservation of food and even has medicinal properties. Losses in production from disease are a major limitation in the culture of this crop. The major diseases are root rot and foot rot, which are results of root infection by Fusarium solani and Phytophtora capsici, respectively. Understanding the molecular interaction between the pathogens and the host's root region is important for obtaining resistant cultivars by biotechnological breeding. Genetic and molecular data for this species, though, are limited. In this paper, RNA-Seq technology has been employed, for the first time, to describe the root transcriptome of black pepper. |
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High-throughput sequencing of black pepper root transcriptome.Piper nigrum LDoençaBlack pepper (Piper nigrum L.) is one of the most popular spices in the world. It is used in cooking and the preservation of food and even has medicinal properties. Losses in production from disease are a major limitation in the culture of this crop. The major diseases are root rot and foot rot, which are results of root infection by Fusarium solani and Phytophtora capsici, respectively. Understanding the molecular interaction between the pathogens and the host's root region is important for obtaining resistant cultivars by biotechnological breeding. Genetic and molecular data for this species, though, are limited. In this paper, RNA-Seq technology has been employed, for the first time, to describe the root transcriptome of black pepper.SHEILA M. C. GORDO, UFPA; DANIEL G. PINHEIRO, USP; EDITH C. O. MOREIRA, UFPA; SIMONE DE MIRANDA RODRIGUES, CPATU; MARLI COSTA POLTRONIERI, CPATU; ORIEL FILGUEIRA DE LEMOS, CPATU; ISRAEL TOJAL DA SILVA, USP; ROMMEL T. J. RAMOS, UFPA; ARTHUR SILVA, UFPA; HORACIO SCHNEIDER, UFPA; WILSON A. SILVA JUNIOR, USP; IRACILDA SAMPAIO, UFPA; SYLVAIN DARNET, UFPA.GORDO, S. M. C.PINHEIRO, D. G.MOREIRA, E. C. O.RODRIGUES, S. M.POLTRONIERI, M. C.LEMOS, O. F. deSILVA, I. T. daRAMOS, R. T. J.SILVA, A.SCHNEIDER, H.SILVA JUNIOR, W. A.SAMPAIO, I.DARNET, S.2012-10-02T11:11:11Z2012-10-02T11:11:11Z2012-10-0220122015-04-08T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleBMC Plant Biology, v. 12, n. 168, 2012.http://www.alice.cnptia.embrapa.br/alice/handle/doc/93524110.1186/1471-2229-12-168enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-15T23:43:08Zoai:www.alice.cnptia.embrapa.br:doc/935241Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-15T23:43:08Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false |
dc.title.none.fl_str_mv |
High-throughput sequencing of black pepper root transcriptome. |
title |
High-throughput sequencing of black pepper root transcriptome. |
spellingShingle |
High-throughput sequencing of black pepper root transcriptome. GORDO, S. M. C. Piper nigrum L Doença |
title_short |
High-throughput sequencing of black pepper root transcriptome. |
title_full |
High-throughput sequencing of black pepper root transcriptome. |
title_fullStr |
High-throughput sequencing of black pepper root transcriptome. |
title_full_unstemmed |
High-throughput sequencing of black pepper root transcriptome. |
title_sort |
High-throughput sequencing of black pepper root transcriptome. |
author |
GORDO, S. M. C. |
author_facet |
GORDO, S. M. C. PINHEIRO, D. G. MOREIRA, E. C. O. RODRIGUES, S. M. POLTRONIERI, M. C. LEMOS, O. F. de SILVA, I. T. da RAMOS, R. T. J. SILVA, A. SCHNEIDER, H. SILVA JUNIOR, W. A. SAMPAIO, I. DARNET, S. |
author_role |
author |
author2 |
PINHEIRO, D. G. MOREIRA, E. C. O. RODRIGUES, S. M. POLTRONIERI, M. C. LEMOS, O. F. de SILVA, I. T. da RAMOS, R. T. J. SILVA, A. SCHNEIDER, H. SILVA JUNIOR, W. A. SAMPAIO, I. DARNET, S. |
author2_role |
author author author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
SHEILA M. C. GORDO, UFPA; DANIEL G. PINHEIRO, USP; EDITH C. O. MOREIRA, UFPA; SIMONE DE MIRANDA RODRIGUES, CPATU; MARLI COSTA POLTRONIERI, CPATU; ORIEL FILGUEIRA DE LEMOS, CPATU; ISRAEL TOJAL DA SILVA, USP; ROMMEL T. J. RAMOS, UFPA; ARTHUR SILVA, UFPA; HORACIO SCHNEIDER, UFPA; WILSON A. SILVA JUNIOR, USP; IRACILDA SAMPAIO, UFPA; SYLVAIN DARNET, UFPA. |
dc.contributor.author.fl_str_mv |
GORDO, S. M. C. PINHEIRO, D. G. MOREIRA, E. C. O. RODRIGUES, S. M. POLTRONIERI, M. C. LEMOS, O. F. de SILVA, I. T. da RAMOS, R. T. J. SILVA, A. SCHNEIDER, H. SILVA JUNIOR, W. A. SAMPAIO, I. DARNET, S. |
dc.subject.por.fl_str_mv |
Piper nigrum L Doença |
topic |
Piper nigrum L Doença |
description |
Black pepper (Piper nigrum L.) is one of the most popular spices in the world. It is used in cooking and the preservation of food and even has medicinal properties. Losses in production from disease are a major limitation in the culture of this crop. The major diseases are root rot and foot rot, which are results of root infection by Fusarium solani and Phytophtora capsici, respectively. Understanding the molecular interaction between the pathogens and the host's root region is important for obtaining resistant cultivars by biotechnological breeding. Genetic and molecular data for this species, though, are limited. In this paper, RNA-Seq technology has been employed, for the first time, to describe the root transcriptome of black pepper. |
publishDate |
2012 |
dc.date.none.fl_str_mv |
2012-10-02T11:11:11Z 2012-10-02T11:11:11Z 2012-10-02 2012 2015-04-08T11:11:11Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
BMC Plant Biology, v. 12, n. 168, 2012. http://www.alice.cnptia.embrapa.br/alice/handle/doc/935241 10.1186/1471-2229-12-168 |
identifier_str_mv |
BMC Plant Biology, v. 12, n. 168, 2012. 10.1186/1471-2229-12-168 |
url |
http://www.alice.cnptia.embrapa.br/alice/handle/doc/935241 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa) instacron:EMBRAPA |
instname_str |
Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
instacron_str |
EMBRAPA |
institution |
EMBRAPA |
reponame_str |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
collection |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
repository.name.fl_str_mv |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
repository.mail.fl_str_mv |
cg-riaa@embrapa.br |
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1822720903029456896 |