Genome scan for meat quality traits in Nelore beef cattle.
Autor(a) principal: | |
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Data de Publicação: | 2013 |
Outros Autores: | , , , , , , , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | por |
Título da fonte: | Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
Texto Completo: | http://www.alice.cnptia.embrapa.br/alice/handle/doc/982207 |
Resumo: | Meat quality traits are economically important because they affect consumers' acceptance, which, in turn, influences the demand for beef. However, selection to improve meat quality is limited by the small numbers of animals on which meat tenderness can be evaluated due to the cost of performing shear force analysis and the resultant damage to the carcass. Genome wide-association studies for Warner-Bratzler shear force measured at different times of meat aging, backfat thickness, ribeye muscle area, scanning parameters [lightness, redness (a*), and yellowness] to ascertain color characteristics of meat and fat, water-holding capacity, cooking loss (CL), and muscle pH were conducted using genotype data from the Illumina BovineHD BeadChip array to identify quantitative trait loci (QTL) in all phenotyped Nelore cattle. Phenotype count for these animals ranged from 430 to 536 across traits. Meat quality traits in Nelore are controlled by numerous QTL of small effect, except for a small number of large-effect QTL identified for a*fat, CL, and pH. Genomic regions harboring these QTL and the pathways in which the genes from these regions act appear to differ from those identified in taurine cattle for meat quality traits. These results will guide future QTL mapping studies and the development of models for the prediction of genetic merit to implement genomic selection for meat quality in Nelore cattle. |
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Genome scan for meat quality traits in Nelore beef cattle.GWASQTLbeef cattlezebuMeat quality traits are economically important because they affect consumers' acceptance, which, in turn, influences the demand for beef. However, selection to improve meat quality is limited by the small numbers of animals on which meat tenderness can be evaluated due to the cost of performing shear force analysis and the resultant damage to the carcass. Genome wide-association studies for Warner-Bratzler shear force measured at different times of meat aging, backfat thickness, ribeye muscle area, scanning parameters [lightness, redness (a*), and yellowness] to ascertain color characteristics of meat and fat, water-holding capacity, cooking loss (CL), and muscle pH were conducted using genotype data from the Illumina BovineHD BeadChip array to identify quantitative trait loci (QTL) in all phenotyped Nelore cattle. Phenotype count for these animals ranged from 430 to 536 across traits. Meat quality traits in Nelore are controlled by numerous QTL of small effect, except for a small number of large-effect QTL identified for a*fat, CL, and pH. Genomic regions harboring these QTL and the pathways in which the genes from these regions act appear to differ from those identified in taurine cattle for meat quality traits. These results will guide future QTL mapping studies and the development of models for the prediction of genetic merit to implement genomic selection for meat quality in Nelore cattle.POLYANA C. TIZIOTO, POS GRADUAÇÃO UFScar/SÃO CARLOS, SP; J. E. DECKER; PROF. UNIVERSITY OF MISSOURI/COLUMBIA; R. D. SCHNABEL, PROF. UNIVERSITY OF MISSOURI/COLUMBIA; MAURICIO DE ALVARENGA MUDADU, CPPSE; G. B. MOURÃO; LUIZ L. COUTINHO; PATRICIA THOLON, CPPSE; T. S. SONSTEGARD, PROF. AGRICULTURE RESERCH SERVICE/ BELTSVILLE; ANTONIO DO NASCIMENTO ROSA, CNPGC; MAURICIO MELLO DE ALENCAR, CPPSE; RYMER RAMIZ TULLIO, CPPSE; SERGIO RAPOSO DE MEDEIROS, CNPGC; RENATA TIEKO NASSU, CPPSE; GELSON LUIS DIAS FEIJO, CNPGC; LUIZ OTAVIO CAMPOS DA SILVA, CNPGC; ROBERTO AUGUSTO DE A TORRES JUNIOR, CNPGC; FABIANE SIQUEIRA, CNPGC; ROBERTO HIROSHI HIGA, CNPTIA; LUCIANA CORREIA DE ALMEIDA REGITANO, CPPSE.TIZIOTO, P. C.DECKER, J. E.TAYLOR, J. F.SCHNABEL, R. D.MUDADU, M. de A.MOURAO, G. B.COUTINHO, L. L.THOLON, P.SONSTEGARD, T. S.ROSA, A. do N.ALENCAR, M. M. deTULLIO, R. R.MEDEIROS, S. R. deNASSU, R. T.FEIJO, G. L. D.SILVA, L. O. C. daTORRES JUNIOR, R. A. de A.SIQUEIRA, F.HIGA, R. H.REGITANO, L. C. de A.2023-06-29T10:24:26Z2023-06-29T10:24:26Z2014-03-132013info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlePhysiological genomics, v. 45, n. 21, p. 1012-1020, 2013.http://www.alice.cnptia.embrapa.br/alice/handle/doc/982207doi:10.1152/physiolgenomics.00066.2013porinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2023-06-29T10:24:26Zoai:www.alice.cnptia.embrapa.br:doc/982207Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542023-06-29T10:24:26falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542023-06-29T10:24:26Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false |
dc.title.none.fl_str_mv |
Genome scan for meat quality traits in Nelore beef cattle. |
title |
Genome scan for meat quality traits in Nelore beef cattle. |
spellingShingle |
Genome scan for meat quality traits in Nelore beef cattle. TIZIOTO, P. C. GWAS QTL beef cattle zebu |
title_short |
Genome scan for meat quality traits in Nelore beef cattle. |
title_full |
Genome scan for meat quality traits in Nelore beef cattle. |
title_fullStr |
Genome scan for meat quality traits in Nelore beef cattle. |
title_full_unstemmed |
Genome scan for meat quality traits in Nelore beef cattle. |
title_sort |
Genome scan for meat quality traits in Nelore beef cattle. |
author |
TIZIOTO, P. C. |
author_facet |
TIZIOTO, P. C. DECKER, J. E. TAYLOR, J. F. SCHNABEL, R. D. MUDADU, M. de A. MOURAO, G. B. COUTINHO, L. L. THOLON, P. SONSTEGARD, T. S. ROSA, A. do N. ALENCAR, M. M. de TULLIO, R. R. MEDEIROS, S. R. de NASSU, R. T. FEIJO, G. L. D. SILVA, L. O. C. da TORRES JUNIOR, R. A. de A. SIQUEIRA, F. HIGA, R. H. REGITANO, L. C. de A. |
author_role |
author |
author2 |
DECKER, J. E. TAYLOR, J. F. SCHNABEL, R. D. MUDADU, M. de A. MOURAO, G. B. COUTINHO, L. L. THOLON, P. SONSTEGARD, T. S. ROSA, A. do N. ALENCAR, M. M. de TULLIO, R. R. MEDEIROS, S. R. de NASSU, R. T. FEIJO, G. L. D. SILVA, L. O. C. da TORRES JUNIOR, R. A. de A. SIQUEIRA, F. HIGA, R. H. REGITANO, L. C. de A. |
author2_role |
author author author author author author author author author author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
POLYANA C. TIZIOTO, POS GRADUAÇÃO UFScar/SÃO CARLOS, SP; J. E. DECKER; PROF. UNIVERSITY OF MISSOURI/COLUMBIA; R. D. SCHNABEL, PROF. UNIVERSITY OF MISSOURI/COLUMBIA; MAURICIO DE ALVARENGA MUDADU, CPPSE; G. B. MOURÃO; LUIZ L. COUTINHO; PATRICIA THOLON, CPPSE; T. S. SONSTEGARD, PROF. AGRICULTURE RESERCH SERVICE/ BELTSVILLE; ANTONIO DO NASCIMENTO ROSA, CNPGC; MAURICIO MELLO DE ALENCAR, CPPSE; RYMER RAMIZ TULLIO, CPPSE; SERGIO RAPOSO DE MEDEIROS, CNPGC; RENATA TIEKO NASSU, CPPSE; GELSON LUIS DIAS FEIJO, CNPGC; LUIZ OTAVIO CAMPOS DA SILVA, CNPGC; ROBERTO AUGUSTO DE A TORRES JUNIOR, CNPGC; FABIANE SIQUEIRA, CNPGC; ROBERTO HIROSHI HIGA, CNPTIA; LUCIANA CORREIA DE ALMEIDA REGITANO, CPPSE. |
dc.contributor.author.fl_str_mv |
TIZIOTO, P. C. DECKER, J. E. TAYLOR, J. F. SCHNABEL, R. D. MUDADU, M. de A. MOURAO, G. B. COUTINHO, L. L. THOLON, P. SONSTEGARD, T. S. ROSA, A. do N. ALENCAR, M. M. de TULLIO, R. R. MEDEIROS, S. R. de NASSU, R. T. FEIJO, G. L. D. SILVA, L. O. C. da TORRES JUNIOR, R. A. de A. SIQUEIRA, F. HIGA, R. H. REGITANO, L. C. de A. |
dc.subject.por.fl_str_mv |
GWAS QTL beef cattle zebu |
topic |
GWAS QTL beef cattle zebu |
description |
Meat quality traits are economically important because they affect consumers' acceptance, which, in turn, influences the demand for beef. However, selection to improve meat quality is limited by the small numbers of animals on which meat tenderness can be evaluated due to the cost of performing shear force analysis and the resultant damage to the carcass. Genome wide-association studies for Warner-Bratzler shear force measured at different times of meat aging, backfat thickness, ribeye muscle area, scanning parameters [lightness, redness (a*), and yellowness] to ascertain color characteristics of meat and fat, water-holding capacity, cooking loss (CL), and muscle pH were conducted using genotype data from the Illumina BovineHD BeadChip array to identify quantitative trait loci (QTL) in all phenotyped Nelore cattle. Phenotype count for these animals ranged from 430 to 536 across traits. Meat quality traits in Nelore are controlled by numerous QTL of small effect, except for a small number of large-effect QTL identified for a*fat, CL, and pH. Genomic regions harboring these QTL and the pathways in which the genes from these regions act appear to differ from those identified in taurine cattle for meat quality traits. These results will guide future QTL mapping studies and the development of models for the prediction of genetic merit to implement genomic selection for meat quality in Nelore cattle. |
publishDate |
2013 |
dc.date.none.fl_str_mv |
2013 2014-03-13 2023-06-29T10:24:26Z 2023-06-29T10:24:26Z |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/publishedVersion info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
Physiological genomics, v. 45, n. 21, p. 1012-1020, 2013. http://www.alice.cnptia.embrapa.br/alice/handle/doc/982207 doi:10.1152/physiolgenomics.00066.2013 |
identifier_str_mv |
Physiological genomics, v. 45, n. 21, p. 1012-1020, 2013. doi:10.1152/physiolgenomics.00066.2013 |
url |
http://www.alice.cnptia.embrapa.br/alice/handle/doc/982207 |
dc.language.iso.fl_str_mv |
por |
language |
por |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa) instacron:EMBRAPA |
instname_str |
Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
instacron_str |
EMBRAPA |
institution |
EMBRAPA |
reponame_str |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
collection |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
repository.name.fl_str_mv |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
repository.mail.fl_str_mv |
cg-riaa@embrapa.br |
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1794503546812497920 |