Genome scan for meat quality traits in Nelore beef cattle.

Detalhes bibliográficos
Autor(a) principal: TIZIOTO, P. C.
Data de Publicação: 2013
Outros Autores: DECKER, J. E., TAYLOR, J. F., SCHNABEL, R. D., MUDADU, M. de A., MOURAO, G. B., COUTINHO, L. L., THOLON, P., SONSTEGARD, T. S., ROSA, A. do N., ALENCAR, M. M. de, TULLIO, R. R., MEDEIROS, S. R. de, NASSU, R. T., FEIJO, G. L. D., SILVA, L. O. C. da, TORRES JUNIOR, R. A. de A., SIQUEIRA, F., HIGA, R. H., REGITANO, L. C. de A.
Tipo de documento: Artigo
Idioma: por
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/982207
Resumo: Meat quality traits are economically important because they affect consumers' acceptance, which, in turn, influences the demand for beef. However, selection to improve meat quality is limited by the small numbers of animals on which meat tenderness can be evaluated due to the cost of performing shear force analysis and the resultant damage to the carcass. Genome wide-association studies for Warner-Bratzler shear force measured at different times of meat aging, backfat thickness, ribeye muscle area, scanning parameters [lightness, redness (a*), and yellowness] to ascertain color characteristics of meat and fat, water-holding capacity, cooking loss (CL), and muscle pH were conducted using genotype data from the Illumina BovineHD BeadChip array to identify quantitative trait loci (QTL) in all phenotyped Nelore cattle. Phenotype count for these animals ranged from 430 to 536 across traits. Meat quality traits in Nelore are controlled by numerous QTL of small effect, except for a small number of large-effect QTL identified for a*fat, CL, and pH. Genomic regions harboring these QTL and the pathways in which the genes from these regions act appear to differ from those identified in taurine cattle for meat quality traits. These results will guide future QTL mapping studies and the development of models for the prediction of genetic merit to implement genomic selection for meat quality in Nelore cattle.
id EMBR_6a0a68559517a6bf70b8e91c321ffe9e
oai_identifier_str oai:www.alice.cnptia.embrapa.br:doc/982207
network_acronym_str EMBR
network_name_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository_id_str 2154
spelling Genome scan for meat quality traits in Nelore beef cattle.GWASQTLbeef cattlezebuMeat quality traits are economically important because they affect consumers' acceptance, which, in turn, influences the demand for beef. However, selection to improve meat quality is limited by the small numbers of animals on which meat tenderness can be evaluated due to the cost of performing shear force analysis and the resultant damage to the carcass. Genome wide-association studies for Warner-Bratzler shear force measured at different times of meat aging, backfat thickness, ribeye muscle area, scanning parameters [lightness, redness (a*), and yellowness] to ascertain color characteristics of meat and fat, water-holding capacity, cooking loss (CL), and muscle pH were conducted using genotype data from the Illumina BovineHD BeadChip array to identify quantitative trait loci (QTL) in all phenotyped Nelore cattle. Phenotype count for these animals ranged from 430 to 536 across traits. Meat quality traits in Nelore are controlled by numerous QTL of small effect, except for a small number of large-effect QTL identified for a*fat, CL, and pH. Genomic regions harboring these QTL and the pathways in which the genes from these regions act appear to differ from those identified in taurine cattle for meat quality traits. These results will guide future QTL mapping studies and the development of models for the prediction of genetic merit to implement genomic selection for meat quality in Nelore cattle.POLYANA C. TIZIOTO, POS GRADUAÇÃO UFScar/SÃO CARLOS, SP; J. E. DECKER; PROF. UNIVERSITY OF MISSOURI/COLUMBIA; R. D. SCHNABEL, PROF. UNIVERSITY OF MISSOURI/COLUMBIA; MAURICIO DE ALVARENGA MUDADU, CPPSE; G. B. MOURÃO; LUIZ L. COUTINHO; PATRICIA THOLON, CPPSE; T. S. SONSTEGARD, PROF. AGRICULTURE RESERCH SERVICE/ BELTSVILLE; ANTONIO DO NASCIMENTO ROSA, CNPGC; MAURICIO MELLO DE ALENCAR, CPPSE; RYMER RAMIZ TULLIO, CPPSE; SERGIO RAPOSO DE MEDEIROS, CNPGC; RENATA TIEKO NASSU, CPPSE; GELSON LUIS DIAS FEIJO, CNPGC; LUIZ OTAVIO CAMPOS DA SILVA, CNPGC; ROBERTO AUGUSTO DE A TORRES JUNIOR, CNPGC; FABIANE SIQUEIRA, CNPGC; ROBERTO HIROSHI HIGA, CNPTIA; LUCIANA CORREIA DE ALMEIDA REGITANO, CPPSE.TIZIOTO, P. C.DECKER, J. E.TAYLOR, J. F.SCHNABEL, R. D.MUDADU, M. de A.MOURAO, G. B.COUTINHO, L. L.THOLON, P.SONSTEGARD, T. S.ROSA, A. do N.ALENCAR, M. M. deTULLIO, R. R.MEDEIROS, S. R. deNASSU, R. T.FEIJO, G. L. D.SILVA, L. O. C. daTORRES JUNIOR, R. A. de A.SIQUEIRA, F.HIGA, R. H.REGITANO, L. C. de A.2023-06-29T10:24:26Z2023-06-29T10:24:26Z2014-03-132013info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlePhysiological genomics, v. 45, n. 21, p. 1012-1020, 2013.http://www.alice.cnptia.embrapa.br/alice/handle/doc/982207doi:10.1152/physiolgenomics.00066.2013porinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2023-06-29T10:24:26Zoai:www.alice.cnptia.embrapa.br:doc/982207Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542023-06-29T10:24:26falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542023-06-29T10:24:26Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Genome scan for meat quality traits in Nelore beef cattle.
title Genome scan for meat quality traits in Nelore beef cattle.
spellingShingle Genome scan for meat quality traits in Nelore beef cattle.
TIZIOTO, P. C.
GWAS
QTL
beef cattle
zebu
title_short Genome scan for meat quality traits in Nelore beef cattle.
title_full Genome scan for meat quality traits in Nelore beef cattle.
title_fullStr Genome scan for meat quality traits in Nelore beef cattle.
title_full_unstemmed Genome scan for meat quality traits in Nelore beef cattle.
title_sort Genome scan for meat quality traits in Nelore beef cattle.
author TIZIOTO, P. C.
author_facet TIZIOTO, P. C.
DECKER, J. E.
TAYLOR, J. F.
SCHNABEL, R. D.
MUDADU, M. de A.
MOURAO, G. B.
COUTINHO, L. L.
THOLON, P.
SONSTEGARD, T. S.
ROSA, A. do N.
ALENCAR, M. M. de
TULLIO, R. R.
MEDEIROS, S. R. de
NASSU, R. T.
FEIJO, G. L. D.
SILVA, L. O. C. da
TORRES JUNIOR, R. A. de A.
SIQUEIRA, F.
HIGA, R. H.
REGITANO, L. C. de A.
author_role author
author2 DECKER, J. E.
TAYLOR, J. F.
SCHNABEL, R. D.
MUDADU, M. de A.
MOURAO, G. B.
COUTINHO, L. L.
THOLON, P.
SONSTEGARD, T. S.
ROSA, A. do N.
ALENCAR, M. M. de
TULLIO, R. R.
MEDEIROS, S. R. de
NASSU, R. T.
FEIJO, G. L. D.
SILVA, L. O. C. da
TORRES JUNIOR, R. A. de A.
SIQUEIRA, F.
HIGA, R. H.
REGITANO, L. C. de A.
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv POLYANA C. TIZIOTO, POS GRADUAÇÃO UFScar/SÃO CARLOS, SP; J. E. DECKER; PROF. UNIVERSITY OF MISSOURI/COLUMBIA; R. D. SCHNABEL, PROF. UNIVERSITY OF MISSOURI/COLUMBIA; MAURICIO DE ALVARENGA MUDADU, CPPSE; G. B. MOURÃO; LUIZ L. COUTINHO; PATRICIA THOLON, CPPSE; T. S. SONSTEGARD, PROF. AGRICULTURE RESERCH SERVICE/ BELTSVILLE; ANTONIO DO NASCIMENTO ROSA, CNPGC; MAURICIO MELLO DE ALENCAR, CPPSE; RYMER RAMIZ TULLIO, CPPSE; SERGIO RAPOSO DE MEDEIROS, CNPGC; RENATA TIEKO NASSU, CPPSE; GELSON LUIS DIAS FEIJO, CNPGC; LUIZ OTAVIO CAMPOS DA SILVA, CNPGC; ROBERTO AUGUSTO DE A TORRES JUNIOR, CNPGC; FABIANE SIQUEIRA, CNPGC; ROBERTO HIROSHI HIGA, CNPTIA; LUCIANA CORREIA DE ALMEIDA REGITANO, CPPSE.
dc.contributor.author.fl_str_mv TIZIOTO, P. C.
DECKER, J. E.
TAYLOR, J. F.
SCHNABEL, R. D.
MUDADU, M. de A.
MOURAO, G. B.
COUTINHO, L. L.
THOLON, P.
SONSTEGARD, T. S.
ROSA, A. do N.
ALENCAR, M. M. de
TULLIO, R. R.
MEDEIROS, S. R. de
NASSU, R. T.
FEIJO, G. L. D.
SILVA, L. O. C. da
TORRES JUNIOR, R. A. de A.
SIQUEIRA, F.
HIGA, R. H.
REGITANO, L. C. de A.
dc.subject.por.fl_str_mv GWAS
QTL
beef cattle
zebu
topic GWAS
QTL
beef cattle
zebu
description Meat quality traits are economically important because they affect consumers' acceptance, which, in turn, influences the demand for beef. However, selection to improve meat quality is limited by the small numbers of animals on which meat tenderness can be evaluated due to the cost of performing shear force analysis and the resultant damage to the carcass. Genome wide-association studies for Warner-Bratzler shear force measured at different times of meat aging, backfat thickness, ribeye muscle area, scanning parameters [lightness, redness (a*), and yellowness] to ascertain color characteristics of meat and fat, water-holding capacity, cooking loss (CL), and muscle pH were conducted using genotype data from the Illumina BovineHD BeadChip array to identify quantitative trait loci (QTL) in all phenotyped Nelore cattle. Phenotype count for these animals ranged from 430 to 536 across traits. Meat quality traits in Nelore are controlled by numerous QTL of small effect, except for a small number of large-effect QTL identified for a*fat, CL, and pH. Genomic regions harboring these QTL and the pathways in which the genes from these regions act appear to differ from those identified in taurine cattle for meat quality traits. These results will guide future QTL mapping studies and the development of models for the prediction of genetic merit to implement genomic selection for meat quality in Nelore cattle.
publishDate 2013
dc.date.none.fl_str_mv 2013
2014-03-13
2023-06-29T10:24:26Z
2023-06-29T10:24:26Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Physiological genomics, v. 45, n. 21, p. 1012-1020, 2013.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/982207
doi:10.1152/physiolgenomics.00066.2013
identifier_str_mv Physiological genomics, v. 45, n. 21, p. 1012-1020, 2013.
doi:10.1152/physiolgenomics.00066.2013
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/982207
dc.language.iso.fl_str_mv por
language por
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
_version_ 1794503546812497920