Evaluation of TFAM and FABP4 gene polymorphisms in three lines of Nellore cattle selected for growth
Autor(a) principal: | |
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Data de Publicação: | 2010 |
Outros Autores: | , , , , , , |
Tipo de documento: | Artigo de conferência |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.4238/vol9-4gmr850 http://hdl.handle.net/11449/4950 |
Resumo: | We analyzed the polymorphisms TFAM HaeIII, TFAM MboI and FABP4 MspA1I in three Nellore lines selected for growth in order to evaluate how selection affects the frequencies of these polymorphisms and evaluate their association with growth and carcass traits in Zebu cattle. Birth, weaning and yearling weights, rump height, longissimus muscle area, backfat thickness, and rump fat thickness were analyzed. The sample was constituted of animals from two lines selected for yearling weight (NeS and NeT), and a control line (NeC), established in 1980, at the São Paulo Instituto de Zootecnia. Two hundred and seventy-two heifers were genotyped for TFAM gene SNPs, and 325 heifers were genotyped for the FABP4 SNP. High frequencies were observed for the alleles A (TFAM HaeIII), C (TFAM MboI) and C (FABP4 MspA1I). Significant differences in allele frequencies between NeS and NeT were observed for the TFAM HaeIII, and between the line NeT and lines NeC and NeS for the FABP4 MspA1I SNP. Five haplotypes were observed for the two polymorphisms in the TFAM gene, haplotype AACC being the most frequent. None of the markers evaluated separately or according to haplotype was significantly associated with the growth and carcass traits. The low frequencies of alleles that are associated with high marbling scores and thick subcutaneous fat in taurine breeds might explain the low means for these traits in Nellore cattle. |
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Evaluation of TFAM and FABP4 gene polymorphisms in three lines of Nellore cattle selected for growthBeef cattleQTLSNPMarker assisted selectionZebuWe analyzed the polymorphisms TFAM HaeIII, TFAM MboI and FABP4 MspA1I in three Nellore lines selected for growth in order to evaluate how selection affects the frequencies of these polymorphisms and evaluate their association with growth and carcass traits in Zebu cattle. Birth, weaning and yearling weights, rump height, longissimus muscle area, backfat thickness, and rump fat thickness were analyzed. The sample was constituted of animals from two lines selected for yearling weight (NeS and NeT), and a control line (NeC), established in 1980, at the São Paulo Instituto de Zootecnia. Two hundred and seventy-two heifers were genotyped for TFAM gene SNPs, and 325 heifers were genotyped for the FABP4 SNP. High frequencies were observed for the alleles A (TFAM HaeIII), C (TFAM MboI) and C (FABP4 MspA1I). Significant differences in allele frequencies between NeS and NeT were observed for the TFAM HaeIII, and between the line NeT and lines NeC and NeS for the FABP4 MspA1I SNP. Five haplotypes were observed for the two polymorphisms in the TFAM gene, haplotype AACC being the most frequent. None of the markers evaluated separately or according to haplotype was significantly associated with the growth and carcass traits. The low frequencies of alleles that are associated with high marbling scores and thick subcutaneous fat in taurine breeds might explain the low means for these traits in Nellore cattle.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Univ Estadual Paulista, Fac Ciencias Agr & Vet, Dept Zootecnia, Jaboticabal, SP, BrazilCtr Pesquisa Pecuaria Corte, Inst Zootecnia, Sertaozinho, SP, BrazilUniv Estadual Paulista, Fac Ciencias Agr & Vet, Dept Zootecnia, Jaboticabal, SP, BrazilFunpec-editoraUniversidade Estadual Paulista (Unesp)Ayres, D. R. [UNESP]Souza, F. R. P. [UNESP]Mercadante, M. E. Z.Fonseca, L. F. S. [UNESP]Tonhati, Humberto [UNESP]Cyrillo, J. N. S. G.Bonilha, Sarah Figueiredo MartinsAlbuquerque, Lucia Galvão de [UNESP]2014-05-20T13:19:10Z2014-05-20T13:19:10Z2010-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/conferenceObject2050-2059application/pdfhttp://dx.doi.org/10.4238/vol9-4gmr850Genetics and Molecular Research. Ribeirao Preto: Funpec-editora, v. 9, n. 4, p. 2050-2059, 2010.1676-5680http://hdl.handle.net/11449/495010.4238/vol9-4gmr850WOS:000284324400006WOS000284324400006.pdf74452549608581595866981114947883Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengGenetics and Molecular Research0,439info:eu-repo/semantics/openAccess2024-06-07T18:45:51Zoai:repositorio.unesp.br:11449/4950Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T14:39:38.278967Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Evaluation of TFAM and FABP4 gene polymorphisms in three lines of Nellore cattle selected for growth |
title |
Evaluation of TFAM and FABP4 gene polymorphisms in three lines of Nellore cattle selected for growth |
spellingShingle |
Evaluation of TFAM and FABP4 gene polymorphisms in three lines of Nellore cattle selected for growth Ayres, D. R. [UNESP] Beef cattle QTL SNP Marker assisted selection Zebu |
title_short |
Evaluation of TFAM and FABP4 gene polymorphisms in three lines of Nellore cattle selected for growth |
title_full |
Evaluation of TFAM and FABP4 gene polymorphisms in three lines of Nellore cattle selected for growth |
title_fullStr |
Evaluation of TFAM and FABP4 gene polymorphisms in three lines of Nellore cattle selected for growth |
title_full_unstemmed |
Evaluation of TFAM and FABP4 gene polymorphisms in three lines of Nellore cattle selected for growth |
title_sort |
Evaluation of TFAM and FABP4 gene polymorphisms in three lines of Nellore cattle selected for growth |
author |
Ayres, D. R. [UNESP] |
author_facet |
Ayres, D. R. [UNESP] Souza, F. R. P. [UNESP] Mercadante, M. E. Z. Fonseca, L. F. S. [UNESP] Tonhati, Humberto [UNESP] Cyrillo, J. N. S. G. Bonilha, Sarah Figueiredo Martins Albuquerque, Lucia Galvão de [UNESP] |
author_role |
author |
author2 |
Souza, F. R. P. [UNESP] Mercadante, M. E. Z. Fonseca, L. F. S. [UNESP] Tonhati, Humberto [UNESP] Cyrillo, J. N. S. G. Bonilha, Sarah Figueiredo Martins Albuquerque, Lucia Galvão de [UNESP] |
author2_role |
author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) |
dc.contributor.author.fl_str_mv |
Ayres, D. R. [UNESP] Souza, F. R. P. [UNESP] Mercadante, M. E. Z. Fonseca, L. F. S. [UNESP] Tonhati, Humberto [UNESP] Cyrillo, J. N. S. G. Bonilha, Sarah Figueiredo Martins Albuquerque, Lucia Galvão de [UNESP] |
dc.subject.por.fl_str_mv |
Beef cattle QTL SNP Marker assisted selection Zebu |
topic |
Beef cattle QTL SNP Marker assisted selection Zebu |
description |
We analyzed the polymorphisms TFAM HaeIII, TFAM MboI and FABP4 MspA1I in three Nellore lines selected for growth in order to evaluate how selection affects the frequencies of these polymorphisms and evaluate their association with growth and carcass traits in Zebu cattle. Birth, weaning and yearling weights, rump height, longissimus muscle area, backfat thickness, and rump fat thickness were analyzed. The sample was constituted of animals from two lines selected for yearling weight (NeS and NeT), and a control line (NeC), established in 1980, at the São Paulo Instituto de Zootecnia. Two hundred and seventy-two heifers were genotyped for TFAM gene SNPs, and 325 heifers were genotyped for the FABP4 SNP. High frequencies were observed for the alleles A (TFAM HaeIII), C (TFAM MboI) and C (FABP4 MspA1I). Significant differences in allele frequencies between NeS and NeT were observed for the TFAM HaeIII, and between the line NeT and lines NeC and NeS for the FABP4 MspA1I SNP. Five haplotypes were observed for the two polymorphisms in the TFAM gene, haplotype AACC being the most frequent. None of the markers evaluated separately or according to haplotype was significantly associated with the growth and carcass traits. The low frequencies of alleles that are associated with high marbling scores and thick subcutaneous fat in taurine breeds might explain the low means for these traits in Nellore cattle. |
publishDate |
2010 |
dc.date.none.fl_str_mv |
2010-01-01 2014-05-20T13:19:10Z 2014-05-20T13:19:10Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/conferenceObject |
format |
conferenceObject |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.4238/vol9-4gmr850 Genetics and Molecular Research. Ribeirao Preto: Funpec-editora, v. 9, n. 4, p. 2050-2059, 2010. 1676-5680 http://hdl.handle.net/11449/4950 10.4238/vol9-4gmr850 WOS:000284324400006 WOS000284324400006.pdf 7445254960858159 5866981114947883 |
url |
http://dx.doi.org/10.4238/vol9-4gmr850 http://hdl.handle.net/11449/4950 |
identifier_str_mv |
Genetics and Molecular Research. Ribeirao Preto: Funpec-editora, v. 9, n. 4, p. 2050-2059, 2010. 1676-5680 10.4238/vol9-4gmr850 WOS:000284324400006 WOS000284324400006.pdf 7445254960858159 5866981114947883 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Genetics and Molecular Research 0,439 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
2050-2059 application/pdf |
dc.publisher.none.fl_str_mv |
Funpec-editora |
publisher.none.fl_str_mv |
Funpec-editora |
dc.source.none.fl_str_mv |
Web of Science reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
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1808128396059738112 |