Analysis of transferability of microsatellite primers (SSR) in wild Passiflora species and intraspecific genetic diversity in Passiflora alata.

Detalhes bibliográficos
Autor(a) principal: SILVA, M. A. A.
Data de Publicação: 2014
Outros Autores: SOUZA, M. M., SILVA, G. S., MELO, C. A. F., CORRÊA, R. X., ARAÚJO, I. S., CONCEIÇÃO, L. D. H. C. S. da
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1008509
Resumo: ABSTRACT. The genus Passiflora L. is the most representative of Passifloraceae, with over 500 known species, among which 150-200 originated from Brazil. In addition to the great commercial importance of this genus for the fruit market, many of the species have exotic flowers with a huge diversity of colors and can thereby be exploited as ornamental plants. This study was aimed at investigating the transferability of microsatellite primers in wild Passiflora species (P. cacao, P. cincinnata, P. glandulosa, P. gibertii, and P. mucronata) and characterizing 29 P. alata accessions using microsatellite primers that were previously developed in a library enriched with microsatellites from P. edulis f. flavicarpa for P. alata. The interspecies cross-amplification rate varied, and P. cacao exhibited the highest rate of amplification, suggesting a greater degree of proximity to P. edulis. The study of intraspecific accessions in P. alata found genetic similarity, with values ranging from 0.47 to 1.00 and an average similarity of 0.74. Hence, this study revealed the intraspecific genetic variability of P. alata in the Universidade Estadual de Santa Cruz?s Active Germplasm Bank and will lead to the adoption of mating strategies between accessions; thus making their use more suitable for breeding purposes.
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spelling Analysis of transferability of microsatellite primers (SSR) in wild Passiflora species and intraspecific genetic diversity in Passiflora alata.Diversidade genéticaMarcador microsateliteTransferabilidade de primersMarcador genéticoMaracujáFlorMelhoramento genético vegetalPassiflora alataGenetic variationMicrosatellite repeatsDNA primersABSTRACT. The genus Passiflora L. is the most representative of Passifloraceae, with over 500 known species, among which 150-200 originated from Brazil. In addition to the great commercial importance of this genus for the fruit market, many of the species have exotic flowers with a huge diversity of colors and can thereby be exploited as ornamental plants. This study was aimed at investigating the transferability of microsatellite primers in wild Passiflora species (P. cacao, P. cincinnata, P. glandulosa, P. gibertii, and P. mucronata) and characterizing 29 P. alata accessions using microsatellite primers that were previously developed in a library enriched with microsatellites from P. edulis f. flavicarpa for P. alata. The interspecies cross-amplification rate varied, and P. cacao exhibited the highest rate of amplification, suggesting a greater degree of proximity to P. edulis. The study of intraspecific accessions in P. alata found genetic similarity, with values ranging from 0.47 to 1.00 and an average similarity of 0.74. Hence, this study revealed the intraspecific genetic variability of P. alata in the Universidade Estadual de Santa Cruz?s Active Germplasm Bank and will lead to the adoption of mating strategies between accessions; thus making their use more suitable for breeding purposes.LEO DUC HAA CARSON SCHWARTZHAUPT DA, CPAC.SILVA, M. A. A.SOUZA, M. M.SILVA, G. S.MELO, C. A. F.CORRÊA, R. X.ARAÚJO, I. S.CONCEIÇÃO, L. D. H. C. S. da2015-02-11T11:11:11Z2015-02-11T11:11:11Z2015-02-1120142015-02-11T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleGenetics and Molecular Research, v. 13, n. 3, p. 5908-5918, 2014.http://www.alice.cnptia.embrapa.br/alice/handle/doc/1008509enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-16T01:48:42Zoai:www.alice.cnptia.embrapa.br:doc/1008509Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542017-08-16T01:48:42falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-16T01:48:42Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Analysis of transferability of microsatellite primers (SSR) in wild Passiflora species and intraspecific genetic diversity in Passiflora alata.
title Analysis of transferability of microsatellite primers (SSR) in wild Passiflora species and intraspecific genetic diversity in Passiflora alata.
spellingShingle Analysis of transferability of microsatellite primers (SSR) in wild Passiflora species and intraspecific genetic diversity in Passiflora alata.
SILVA, M. A. A.
Diversidade genética
Marcador microsatelite
Transferabilidade de primers
Marcador genético
Maracujá
Flor
Melhoramento genético vegetal
Passiflora alata
Genetic variation
Microsatellite repeats
DNA primers
title_short Analysis of transferability of microsatellite primers (SSR) in wild Passiflora species and intraspecific genetic diversity in Passiflora alata.
title_full Analysis of transferability of microsatellite primers (SSR) in wild Passiflora species and intraspecific genetic diversity in Passiflora alata.
title_fullStr Analysis of transferability of microsatellite primers (SSR) in wild Passiflora species and intraspecific genetic diversity in Passiflora alata.
title_full_unstemmed Analysis of transferability of microsatellite primers (SSR) in wild Passiflora species and intraspecific genetic diversity in Passiflora alata.
title_sort Analysis of transferability of microsatellite primers (SSR) in wild Passiflora species and intraspecific genetic diversity in Passiflora alata.
author SILVA, M. A. A.
author_facet SILVA, M. A. A.
SOUZA, M. M.
SILVA, G. S.
MELO, C. A. F.
CORRÊA, R. X.
ARAÚJO, I. S.
CONCEIÇÃO, L. D. H. C. S. da
author_role author
author2 SOUZA, M. M.
SILVA, G. S.
MELO, C. A. F.
CORRÊA, R. X.
ARAÚJO, I. S.
CONCEIÇÃO, L. D. H. C. S. da
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv LEO DUC HAA CARSON SCHWARTZHAUPT DA, CPAC.
dc.contributor.author.fl_str_mv SILVA, M. A. A.
SOUZA, M. M.
SILVA, G. S.
MELO, C. A. F.
CORRÊA, R. X.
ARAÚJO, I. S.
CONCEIÇÃO, L. D. H. C. S. da
dc.subject.por.fl_str_mv Diversidade genética
Marcador microsatelite
Transferabilidade de primers
Marcador genético
Maracujá
Flor
Melhoramento genético vegetal
Passiflora alata
Genetic variation
Microsatellite repeats
DNA primers
topic Diversidade genética
Marcador microsatelite
Transferabilidade de primers
Marcador genético
Maracujá
Flor
Melhoramento genético vegetal
Passiflora alata
Genetic variation
Microsatellite repeats
DNA primers
description ABSTRACT. The genus Passiflora L. is the most representative of Passifloraceae, with over 500 known species, among which 150-200 originated from Brazil. In addition to the great commercial importance of this genus for the fruit market, many of the species have exotic flowers with a huge diversity of colors and can thereby be exploited as ornamental plants. This study was aimed at investigating the transferability of microsatellite primers in wild Passiflora species (P. cacao, P. cincinnata, P. glandulosa, P. gibertii, and P. mucronata) and characterizing 29 P. alata accessions using microsatellite primers that were previously developed in a library enriched with microsatellites from P. edulis f. flavicarpa for P. alata. The interspecies cross-amplification rate varied, and P. cacao exhibited the highest rate of amplification, suggesting a greater degree of proximity to P. edulis. The study of intraspecific accessions in P. alata found genetic similarity, with values ranging from 0.47 to 1.00 and an average similarity of 0.74. Hence, this study revealed the intraspecific genetic variability of P. alata in the Universidade Estadual de Santa Cruz?s Active Germplasm Bank and will lead to the adoption of mating strategies between accessions; thus making their use more suitable for breeding purposes.
publishDate 2014
dc.date.none.fl_str_mv 2014
2015-02-11T11:11:11Z
2015-02-11T11:11:11Z
2015-02-11
2015-02-11T11:11:11Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Genetics and Molecular Research, v. 13, n. 3, p. 5908-5918, 2014.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1008509
identifier_str_mv Genetics and Molecular Research, v. 13, n. 3, p. 5908-5918, 2014.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1008509
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
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